ChIP-Atlas: Target genes

Potential target genes for TRIM28

Query protein: TRIM28
Distance from TSS: ± 1 kb  ± 5 kb  ± 10 kb
Sort key: SRX671999 | ES cells
 
Color legends
  1000 750 500 250 1 0  (Values = Binding scores of MACS2 and STRING)

Download: TSV (text)
Links: Movie and Document for ChIP-Atlas Target Genes
TRIM28's Target genes

◢ TRIM28: Average

◢ SRX065546: 293

◢ SRX065547: 293

◢ SRX10976388: 293

◢ SRX10976389: 293

◢ SRX150671: 293

◢ SRX16676305: 293

◢ SRX16676306: 293

◢ SRX17826856: 293

◢ SRX17826857: 293

◢ SRX17826858: 293

◢ SRX17826859: 293

◢ SRX17826860: 293

◢ SRX17826861: 293

◢ SRX22117740: 293

◢ SRX22117741: 293

◢ SRX22117742: 293

◢ SRX22117743: 293

◢ SRX2059876: BJAB

◢ SRX391683: CD34 Hematopoietic stem cells

◢ SRX1799522: CD4+ T cells

◢ SRX1799525: CD4+ T cells

◢ SRX1799528: CD4+ T cells

◢ SRX1799531: CD4+ T cells

◣ SRX671999: ES cells

◢ SRX672001: ES cells

◢ SRX672002: ES cells

◢ SRX9823127: GM12878

◢ SRX9823128: GM12878

◢ SRX1177903: HCT 116

◢ SRX702138: hESC derived ectodermal cells

◢ SRX702139: hESC derived mesendodermal cells

◢ SRX702140: hESC derived mesendodermal cells

◢ SRX702141: hESC derived mesendodermal cells

◢ SRX4171357: hESC H1

◢ SRX553658: hESC H1

◢ SRX553665: hESC H1

◢ SRX702142: hESC HUES64

◢ SRX1945293: hESC WIBR3

◢ SRX1945294: hESC WIBR3

◢ SRX11220464: HT-29

◢ SRX11220465: HT-29

◢ SRX11220466: HT-29

◢ SRX9977682: HUVEC

◢ SRX1925740: iPSC derived neural cells

◢ DRX402530: K-562

◢ DRX402531: K-562

◢ SRX028591: K-562

◢ SRX028592: K-562

◢ SRX150543: K-562

◢ SRX190305: K-562

◢ SRX5457586: K-562

◢ SRX5457587: K-562

◢ SRX2545063: LNCAP

◢ SRX2545064: LNCAP

◢ SRX2545065: LNCAP

◢ SRX2545066: LNCAP

◢ SRX3474298: LNCAP

◢ SRX3474299: LNCAP

◢ SRX12813813: MCF-7

◢ SRX12813814: MCF-7

◢ SRX1497516: MCF-7

◢ SRX7030916: MCF-7

◢ SRX7030917: MCF-7

◢ SRX7030918: MCF-7

◢ SRX7030919: MCF-7

◢ DRX402534: MYL

◢ DRX402535: MYL

◢ SRX065554: U2OS

◢ SRX150666: U2OS

◢ TRIM28: STRING

DUX4
ARHGAP39
GAGE2C
GAGE2B
GAGE2A
GAGE12F
GAGE12G
GAGE12D
GAGE12E
GAGE12C
GAGE12H
GAGE7
GAGE6
GAGE5
GAGE4
GAGE12I
GAGE12B
NBPF1
ASMTL
SHTN1
GAGE1
SCARB1
ZNF595
XAGE1B
XAGE1A
CBX1
FAM86B2
NEFH
SIMC1
ZBTB11
GAGE12J
FANK1
DTX2
MORF4L1
ARHGEF35
ZNF84
HADH
SDHAF2
CPSF7
CEP350
CD47
CENPVL2
CENPVL1
CHRM3
RAB3IP
FAM156A
FAM156B
DHRS4L2
C2orf69
PPP2CA
PGLS
CENPVL3
SLC25A13
RANBP17
LIMD1
YY1
HK1
PPM1D
THOC3
SUGP1
MAU2
CCZ1
CS
HEATR3
RIMBP3C
RIMBP3B
PPRC1
BRMS1L
SLC35F5
NOMO3
NOMO1
DGKE
STX17
C17orf67
LONP1
CATSPERD
CHRFAM7A
TCEA2
PSAT1
RAB35
CLINT1
ANKDD1B
MKRN2
TIGD6
HMGXB3
CZIB
SLC25A32
DCAF13
PDE4DIP
ZFP91
CCZ1B
LPXN
CLTA
FIGLA
NOTCH2NLA
ZNF843
ZNF396
MTMR6
ULK4
LOC100289561
ABHD2
DNAJC3
HBEGF
MAGEA8
CCNL1
GRPEL1
RABEP1
THAP10
LRRC49
PAK2
REXO2
FNBP4
PCSK6
TICRR
TENT5B
MSX2
PIWIL1
THOC2
GALNT10
BOLA2
SLX1B
SLX1A
BOLA2B
SERP1
EIF2A
RPS5
ARHGEF5
MYO5A
LYST
ANKFY1
LMNA
NOTCH2NLC
SERPINB1
CBWD5
CBWD3
TADA1
DDT
FBXL5
GSPT2
ENO1
POTEH
CMTM3
LZTS3
SLC15A3
ASNS
BTRC
PPP2R5C
RPL35
ARPC5L
ZNF706
IFI27L1
DDX24
CCN3
SUSD5
TMEM30A
C9orf40
LAPTM4B
PIK3IP1
AP3B2
DHX15
OR10AC1
GAGE8
GAGE2E
GAGE2D
GAGE13
DEFB124
RAB7A
TEC
CIBAR1
CR2
ATP8A2
H1-8
FIGNL1
CERS5
WDR45
CASC3
MTR
WASHC2C
PAAF1
COA4
ARHGAP26
ECE1
TMEM115
GTPBP4
LYN
TAF4B
UVRAG
PDXDC1
DR1
UBE2Q1
RAD51D
HERC3
PYURF
PIGY
TTBK2
CTSL
MAPKAPK3
ZNF346
GRK7
CRH
FAM86B1
ZNF443
MXD1
ZFP2
NOTO
LOXL2
SULT1B1
SEC61B
ALG2
HMGB1
USPL1
BOLA2-SMG1P6
CHGB
PLPP5
M1AP
PTPA
CRAT
CRELD1
ROPN1
CALCOCO2
SLC35G5
IP6K1
HIC2
GPR89B
ILRUN
ZNF823
RUVBL1
EEFSEC
ZNF451
YAE1
MACIR
TESK2
COPZ2
TIMP4
POTEB3
JMJD1C
YWHAG
SRGAP1
CCDC144A
HNRNPM
MCM6
MATN2
VASH2
EMP2
SLC25A28
NAP1L3
FAM133A
CEP135
TMEM60
PHTF2
ZNF416
ZNF384
PDK2
TRIM37
NDEL1
RNF149
ADCK1
MON1A
UBR7
GON7
POM121C
HACD3
SGSM3
MEGF9
GPC3
LMTK3
TMEM163
SERBP1
PRR20E
PRR20D
PRR20C
PRR20B
PRR20A
RAB5B
MIS18A
FH
ROPN1B
TPT1
SOCS3
FAM111B
SNRPD3
GUCD1
PDGFD
PACC1
ZNF354B
KBTBD8
IL17RA
RNF7
IPO7
DLEC1
LRRC8C
RPN2
CFAP206
MROH8
PRKAR2A
CAD
UBE2L6
NHLRC1
TMEM63B
MRPL14
ZBTB8B
SHISAL2B
CEP112
FAM234B
CASR
FBXO39
ERN2
CEP126
POLD3
SCOC
SRSF2
MFSD11
NF2
CYTH2
PLAG1
CHCHD7
FLNB
IRF8
FAR2
FFAR4
RAB31
CDCP1
RPL22
ANKRD36C
FEM1A
ZFYVE27
ZBTB39
INO80
NEDD4
C8orf76
IFNGR1
SNX27
ZXDC
TTC12
HERC2
KRTAP2-1
SEMA4B
CRTAP
SLC7A6
POMK
JAK2
DEPTOR
ZNF778
HIF1A
EIF3F
RABGEF1
SRSF9
DYNLL1
ALS2
MICOS10-NBL1
MICOS10
ADO
ZNF672
GMEB2
SPINT1
INSL6
TMEM222
TBPL1
TRPC4AP
RHOG
CSRNP1
DMTF1
RPS4X
RPS27L
MPDU1
LOC100996842
FAM76A
CAPN7
NT5C3A
GTF2A2
SLC22A5
FUCA1
USP33
BICD1
PSAP
TOR3A
IVD
STAG3
GPC2
XBP1
CTNNAL1
ERICH2
B3GALNT1
TTC9
ZNF514
PJA1
RIPK4
CT47A9
CT47A8
CT47A6
CT47A5
CT47A4
CT47A3
CT47A2
CT47A12
CT47A11
CT47A10
CT47A1
MOB4
NOTCH2NLB
METTL8
DCAF17
TNIP1
ALDH3A2
LUC7L
KRI1
CDH22
POTEB
DPY19L4
ANKRD36
HDAC1
GNE
HACE1
THAP5
DNAJB9
RIPK2
DUSP22
ACO1
SMG1
FIP1L1
NPTN
RAB24
PRELID1
MTMR3
ATCAY
ANGEL1
STK40
RTN4
UBXN4
CAAP1
PJA2
DLC1
GMFB
NOMO2
GNPNAT1
TBC1D5
UBA2
DIXDC1
DNAJC13
SLF2
PTBP3
EID1
ZBTB43
SCYL2
DEPDC4
BVES
PRRG4
CLDN1
OPTN
CCDC3
MAL2
IGSF8
SLC13A3
C6orf62
SLC7A2
HAAO
TMEM47
PSMD8
UHMK1
STMN1
NODAL
SAXO1
RRAGA
RASL11A
EFR3A
PREB
GALNT3
FBN1
SMU1
MIER1
USP3
TIMM23
NFYC
FGD4
RTL10
GNB1L
MND1
CCNT2
LSM6
PPM1A
TSKU
FARP2
COPS3
P3H2
CSNK1D
TMEM263
UCK1
DUSP3
ZNF287
C8orf34
CORIN
ABCC6
MGLL
NGRN
NCAPG
KIAA0319
PPP4C
DDTL
ZNF134
RAB4B
TMOD3
SAFB2
SAFB
C14orf28
MAPKAP1
UQCRFS1
ICA1
NEK5
SEC16A
RAB22A
FAM189B
SYT13
ZNF75A
TIGD7
DNAAF2
SLC36A1
WASHC1
CSGALNACT2
BTF3
SLC30A9
KIAA2026
KCTD8
RLN2
TTC28
MAN1A1
BMPR1A
PHC3
SH3D21
CCDC136
CST3
SCAND1
TAF5
KIF2A
ARL2BP
ACAT1
SCAF11
KTI12
UNKL
TRERF1
CFDP1
SLC7A1
NF1
C1orf216
NPAP1
CLK4
IPO4
SLC25A51
IREB2
RAB1A
GHITM
CORO2A
ARL17B
ARL17A
L3HYPDH
JKAMP
SIRT2
NFKBIB
SMARCE1
EFR3B
PPP1CB
FOXRED2
SEC11C
VANGL2
POLI
SLC4A8
KCTD13
DDX17
FAM193B
POLR3H
RIC1
RPRM
KCNMB4
USP44
GAS2L3
GALNT6
BICC1
NPY
WTIP
PDLIM3
ANGPTL4
PIGW
MYO19
SNX18
ZNF786
LRRC58
BRSK2
EPC1
PKN2
FBXO11
SEC61A2
RIMBP3
CEP76
PSMG2
COX5A
ERMP1
OSBPL1A
DTNBP1
PODXL
AACS
ACTR3B
CDS1
MIEF1
ACVR1B
TAMALIN
DYNC1H1
ZNF782
MID1
GPR26
SEC14L2
HBZ
SNX17
EIF2B4
ARL8B
PARG
RBCK1
HPCAL1
MXI1
GAB2
MOSPD1
MERTK
RCL1
CBR3
C10orf53
SLC5A3
MRPS6
TTC8
ACOT6
SNX33
EDNRA
CTAG1B
CTAG1A
C7orf26
ZCWPW2
AZI2
SPECC1
MTIF3
GATM
HOMER1
DYM
BBS2
NECTIN3
DAAM1
ADAT1
CDCA7
PAXIP1
PHETA1
TMEFF1
GJC1
MAD1L1
NOTCH2
TACC1
ORMDL3
TCP1
NUTM2E
AMMECR1L
MRPL18
MTRR
FASTKD3
GTF2H2C_2
GTF2H2
RPS20
PSMD6
STXBP3
DUSP12
SMG6
RNASEH2C
SRR
MTCH2
RNF135
ASH1L
ZNF607
ZDHHC13
PRKD3
USP20
C9orf78
CHST14
FAM219B
SH3BGRL3
AGFG2
PLLP
SNX6
HPDL
MOXD1
CDK18
SLC5A8
SLC15A1
KCNE4
CGB8
TMED2
PDE12
PPIL2
PCYT1A
EEF2K
RMND5B
PURB
REV3L
SLAIN2
CASP7
TSTD2
NCBP1
CDC14A
ITPR2
FZD4
RNF32
NRXN2
SLC7A5
DYNLT1
ST3GAL6
IL17RD
RCN1
ALOX5
HMCN2
GLP1R
LRP6
PIP4P2
VWA8
DDX5
UROD
HM13
HECTD3
RXYLT1
KBTBD7
SEC62
HP1BP3
GTSE1
PCCB
OSBPL3
MAP11
DENND2B
SPA17
SIAE
JTB
THUMPD2
GCDH
PCMTD1
LHFPL6
BDNF
MMP28
ZNF418
GLT1D1
ACOX3
ATF7IP
VRK2
VAPB
SPG11
EFCAB14
DCTD
SPRYD7
MAP7
PLAGL1
GMCL1
IQSEC1
LGALS8
SZRD1
MATR3
PPM1L
UBE2D1
WIF1
HDHD2
TPST1
DHRS4L1
SPTBN1
IFT22
ACTL6A
GLRX5
SENP7
SRPK2
ZNF717
RNASEH2B
EFCAB6
WDR59
ARGLU1
STK33
TVP23C
CMBL
CYP11A1
H3Y2
GAS7
MGAT3
RFTN1
FAM110B
RHBDL3
SART1
CLDN23
DYDC2
DYDC1
SLC22A17
TPI1
NSFL1C
UBE2L3
KANSL1
RANGAP1
RPL10A
GDI2
IL12A
AKIRIN2
PCMTD2
UGP2
DPYSL3
POMT1
FBXW9
SPATS2
GNG4
PLPP3
ELOVL7
H2AX
HSD11B2
NRROS
MARVELD1
JAM2
FBXO25
KCNH5
SSTR2
CHD1L
LSM5
SCP2
USP15
QSOX1
TCHP
CCAR1
TDG
SRPRB
UBIAD1
SMAP1
MRM3
GLOD4
SELENOK
THAP6
ATXN1L
UBR4
ZNF700
SEPTIN9
PPP2R1A
NCK1
AVL9
C2orf73
DCTN1
CSNK2A1
DCUN1D5
DPEP2
MYL12A
DNAH14
ZNF200
IGSF11
BAZ2B
GRK3
GLCCI1
PSD3
VAC14
KPNA2
PRDX6
ASB13
CAMSAP2
SYBU
SPAG1
YRDC
C1orf122
RALGAPA2
RLN1
GPD2
TMEM74
ABHD6
TOM1L2
DRC3
SMC1B
RIBC2
ESYT3
ARHGEF28
SYN3
BEST1
C3orf62
ANTXR1
IGFBP6
KCNE3
WASF3
TNFRSF8
FBLIM1
TRAPPC8
DSE
ANKRD36B
SLC39A9
ERH
RNF19A
EEF1A1
NUP153
POR
PHF3
TBCA
TASOR
XPOT
WDR12
CARF
MRM1
MRTFA
TMEM192
STK38L
MCM3
DUSP23
CFAP92
GCH1
SQLE
TMA7
CCDC51
PELP1
PGAP4
UGDH
DDX3X
LRRC32
PHYH
EFCC1
TMEM215
POLR3G
MBLAC2
CAPRIN1
DUS2
DDX28
WASHC2A
TRRAP
AHCY
RGS10
CYP46A1
KRTCAP3
HDGFL3
IL15RA
ATG16L2
SOX2
AQP11
PRXL2A
SURF2
SURF1
C5AR2
HUS1
ZMYM5
MFSD8
ABHD18
PHB2
KCNH1
EIF1B
STAT1
YARS2
CYB561A3
TMEM138
NUP133
XPC
LSM3
ZNF326
CLCC1
TMX3
CCDC102B
PHF14
PAPSS1
MRPS30
CUTC
COX15
SYNRG
C9orf85
ABHD17B
GALC
UHRF1BP1L
ZNF324B
FAM151B
OSER1
CHUK
YY1AP1
DAP3
C17orf64
PIM1
SPOCK3
KIAA1109
DEPDC7
MST1R
FOXD4L6
ZDHHC1
FAM107A
AGAP4
DSTYK
EDC4
ADPGK
ARHGAP22
RAB6A
NR2C1
TNPO1
PFDN4
MTHFD2
TRIM52
XPA
EIF3C
EIF3CL
NLRX1
ABHD12
RUBCN
PTPN23
CYSTM1
LRRFIP2
MANBA
PGM2
PAICS
C1orf109
MTDH
PSMD7