ChIP-Atlas: Target genes

Potential target genes for TRIM28

Query protein: TRIM28
Distance from TSS: ± 1 kb  ± 5 kb  ± 10 kb
Sort key: SRX17826861 | 293
 
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  1000 750 500 250 1 0  (Values = Binding scores of MACS2 and STRING)

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Links: Movie and Document for ChIP-Atlas Target Genes
TRIM28's Target genes

◢ TRIM28: Average

◢ SRX065546: 293

◢ SRX065547: 293

◢ SRX10976388: 293

◢ SRX10976389: 293

◢ SRX150671: 293

◢ SRX16676305: 293

◢ SRX16676306: 293

◢ SRX17826856: 293

◢ SRX17826857: 293

◢ SRX17826858: 293

◢ SRX17826859: 293

◢ SRX17826860: 293

◣ SRX17826861: 293

◢ SRX22117740: 293

◢ SRX22117741: 293

◢ SRX22117742: 293

◢ SRX22117743: 293

◢ SRX2059876: BJAB

◢ SRX391683: CD34 Hematopoietic stem cells

◢ SRX1799522: CD4+ T cells

◢ SRX1799525: CD4+ T cells

◢ SRX1799528: CD4+ T cells

◢ SRX1799531: CD4+ T cells

◢ SRX671999: ES cells

◢ SRX672001: ES cells

◢ SRX672002: ES cells

◢ SRX9823127: GM12878

◢ SRX9823128: GM12878

◢ SRX1177903: HCT 116

◢ SRX702138: hESC derived ectodermal cells

◢ SRX702139: hESC derived mesendodermal cells

◢ SRX702140: hESC derived mesendodermal cells

◢ SRX702141: hESC derived mesendodermal cells

◢ SRX4171357: hESC H1

◢ SRX553658: hESC H1

◢ SRX553665: hESC H1

◢ SRX702142: hESC HUES64

◢ SRX1945293: hESC WIBR3

◢ SRX1945294: hESC WIBR3

◢ SRX11220464: HT-29

◢ SRX11220465: HT-29

◢ SRX11220466: HT-29

◢ SRX9977682: HUVEC

◢ SRX1925740: iPSC derived neural cells

◢ DRX402530: K-562

◢ DRX402531: K-562

◢ SRX028591: K-562

◢ SRX028592: K-562

◢ SRX150543: K-562

◢ SRX190305: K-562

◢ SRX5457586: K-562

◢ SRX5457587: K-562

◢ SRX2545063: LNCAP

◢ SRX2545064: LNCAP

◢ SRX2545065: LNCAP

◢ SRX2545066: LNCAP

◢ SRX3474298: LNCAP

◢ SRX3474299: LNCAP

◢ SRX12813813: MCF-7

◢ SRX12813814: MCF-7

◢ SRX1497516: MCF-7

◢ SRX7030916: MCF-7

◢ SRX7030917: MCF-7

◢ SRX7030918: MCF-7

◢ SRX7030919: MCF-7

◢ DRX402534: MYL

◢ DRX402535: MYL

◢ SRX065554: U2OS

◢ SRX150666: U2OS

◢ TRIM28: STRING

MTRNR2L2
MTRNR2L8
ITGB3BP
EFCAB7
DCP1A
PEX3
ADAT2
NME1-NME2
NME1
TEX19
GBA
SNAP47
JMJD4
COPS7B
CYP4F11
NDUFS7
POLR2J3
TMEM101
ZSCAN22
TMEM242
BRWD1
DRG2
WDR11
TOP3B
GOLGA3
EIF2D
MRPS31
SMARCD2
TXNIP
PAXBP1
INTS12
GSTCD
STX16
UTP3
NR1H3
ACP2
KMT2A
SNRPD3
GUCD1
PRPSAP1
GOSR2
RNF187
RBBP5
CASC3
STAT3
ZNF76
INO80C
METTL9
NR1H2
PSMF1
CCDC97
HEMK1
DSTYK
HMGB1
USPL1
TOR1AIP1
ARHGEF1
SPATC1L
MED23
FXN
SMG8
MRPL39
SLC39A3
TSNAX
CLTC
RBM28
CCNG2
RPS7
GTF2H2
GTF2H2C
MRPL48
TATDN3
NSL1
GFI1B
TSC1
THEM4
NUDCD3
ZNF335
SELENOW
MPHOSPH10
MCEE
UBB
DRAP1
C11orf68
SF3A3
TEFM
NOP16
HIGD2A
LMAN2
NUF2
ZNF408
ARHGAP1
NCBP3
TVP23B
TMA16
SSBP1
UBE3B
TRIP4
ZNF561
SNRPD1
HEXIM1
UBC
NKAP
MRPL44
SLC33A1
PRPF18
RTEL1
DUS2
DDX28
TAF3
TACO1
ATXN7L2
STX18
SMG7
NVL
ANKRD13A
WASHC1
RTTN
TTC4
ZCCHC4
KAT6A
NUP54
ALKBH3
VPS25
IPO4
NSFL1C
MRPL40
HIRA
SNX17
EIF2B4
ZBTB45
VPS33A
DMAP1
DDX46
FRA10AC1
FAM207A
KANSL3
PSMB7
SUDS3
ZMPSTE24
GTF3C5
ZNF839
TIMM22
ZBTB17
TIGD1
EIF4E2
C18orf21
RBL1
PPIP5K2
GIN1
EIF3F
RNF121
LOC100133315
BMS1
TTC26
TBC1D13
PIGL
DPY19L4
NDUFS3
KBTBD4
C12orf73
KCTD5
RFXANK
BORCS8
ANKRD36B
EFTUD2
CCDC103
MTF2
EIF1AD
BANF1
DHX40
PREPL
CAMKMT
UQCC1
GTF2H2C_2
YARS1
S100PBP
DNAJB12
TRDMT1
SEC22B
HNRNPA1L2
VPS45
PAFAH2
HUS1
REXO4
MRPS23
MAN2C1
MCOLN1
PPP6R1
KDM1A
CXXC1
PCDH9
NDUFB3
FAM126B
TRUB2
COQ4
VPS13B
MRPL16
UBQLN1
SEC13
PIH1D2
NKAPD1
BANP
HSPE1-MOB4
HSPE1
HSPD1
PRRG2
NOSIP
MRPL58
SF3A1
CCDC157
EDC4
TOMM22
CDK5RAP1
FBXO22
COMMD2
MTIF2
ERCC6L2
MAPK1IP1L
DCAF10
ATR
HINT3
EIF2B3
ZSCAN12
PDE12
BICD2
CCNC
DUS1L
DPP9
SLC35A3
STMP1
COX16
SCFD1
ZBTB40
AGK
UPF2
SLC24A1
INTS14
LTN1
PPP5D1
CALM3
RHBDD3
EWSR1
LRRC59
ZNF148
C6orf226
SLC44A1
KCNJ15
YPEL3
BSDC1
DUSP6
ZNF562
PDE11A
RABGAP1
FEM1C
CBX1
AURKAIP1
SAMD4B
LUC7L2
FMC1-LUC7L2
PUM1
ARHGAP39
FAAH
BAAT
CEP85
RPS29
CCDC130
YWHAQ
ZNF117
TMEM41A
ZNF623
TTLL12
ACYP2
RPL27
RAB37
FMC1
CEP72
PPIG
JMJD1C
RABGAP1L
GDPGP1
CIB1
POLE4
NOS3
NPAS4
TBC1D19
MAPRE2
ACOX3
SELENOH
ZFP30
SKP2
LMBRD2
ZNF426
TTC32
TRMT44
TMEM70
RPL37
FAM227B
DTWD1
DNAJC25-GNG10
DNAJC25
PRELID3B
ATP1A1
POLR3B
TFPT
PRPF31
RERE
GSTA4
YTHDC2
CCDC59
RBBP9
CLK4
CAT
ALG10B
RAD54L2
FRG1
SLC25A51
GTF3C3
REEP3
RPS14
VTA1
NMBR
SFT2D3
SUPT7L
SLC4A1AP
GTF2H4
ANKRD54
LSG1
EPS8
INTS5
BCAR3
AP3S2
HTR5A
ITGA4
SNIP1
CAMK1D
KDM3A
ORC4
MBD5
ZNF829
ZNF568
TMEM43
CHCHD4
TDP2
ACOT13
SCAND1
MRPL21
IGHMBP2
C3orf14
WDR74
ILF2
ATP5MC2
USP30
TMEM222
RILP
NEMF
SAR1B
WDR36
SLC29A2
FAM133B
FGFBP3
ZNF571
ZNF540
NBN
ZNF391
TSEN15
AKAP10
GALK2
MOB4
MRPL1
C17orf75
IST1
WDR43
GTPBP3
MRPS18C
HELQ
CD47
MMP7
KLHL20
ZNF226
TUT1
POLR3E
GABPB2
SMG5
COPS4
SCNM1
LYSMD1
NOTCH2NLC
TTI2
TMEM68
TGS1
NSA2
GFM2
OTUD7A
DDX18
WDR55
BNIP1
CFAP298-TCP10L
CFAP298
ATF7IP
CTNNB1
RUVBL1
KIAA1549
SNRPB
NDUFAF1
ZSCAN25
CPPED1
RAB30
BTD
STAU1
NCOA7
MNAT1
POLG
C8orf37
TPR
ODR4
RMND1
ARMT1
CCNI
RPS20
ADPRS
MITD1
THAP11
MTBP
MRPL13
CHD1L
B4GALT7
GMPS
COX7A2
SUGCT
MPLKIP
PSRC1
EPRS1
GRPEL2
TPM1
SLTM
BRF2
FAM228B
MED18
CCAR2
ZNF609
TIPARP
DCLRE1B
AP4B1
TSFM
ING2
SDHAF3
NAA20
PARP2
LOC102724265
SF3B6
SERPINB1
PIGW
MYO19
SLC39A13
HNRNPD
ADRM1
DEFB124
PHIP
ZSCAN31
COPS2
EIF3E
TPK1
PSMD3
SESN1
CRKL
NECAP2
SMU1
OPA1
CDC73
TRMT2A
RANBP1
ZNF292
VIRMA
MRPL3
SNRPB2
RAB18
MLEC
TGFBR2
LRP6
ALG10
EXO5
PLEKHM3
N4BP2L2
RPL26L1
CLUAP1
FAM98B
GORASP2
ZNF280D
TTC13
TTLL1
CALCRL
MTR
CENPV
MAGOH
INO80B
SACM1L
ZNF605
R3HCC1
CCDC88A
RBM45
ZSCAN30
PIP4P2
AARS2
SNRPE
COA6
CEP57L1
CDK19
ANKRD40
RPL5
MRPS14
TRMT5
SLC38A6
TSGA10
C2orf15
STOML2
RPS15
ANXA2
HAX1
PRIM2
LSM5
CLTB
PDCD6IP
KMT2D
RNF6
SEC23B
PSMD6
DPP8
SUGT1
FAM234A
DDX1
GABPA
ATP5PF
CEP85L
CASS4
PPP2R5B
SMIM13
KRR1
ACTL8
U2SURP
NMNAT1
LZIC
PUS10
PEX13
C10orf88
NBPF1
CEP120
ITFG2
YTHDF2
PRKAB2
TRAM1
CDIPT
HLA-E
RNF125
NOXA1
ITGAL
NFAT5
RPS3A
CBWD5
DHX16
ZZZ3
SRRM3
RCAN1
NOTCH2NLA
MRPS33
GSPT1
CCDC150
TARS3
TBL1X
PTPN4
CYP17A1
SLC35B1
WWOX
PRMT5
ZNF165
NUP107
GLIPR1L2
ATG101
AAR2
RRN3
TMEM259
SRP9
MRPL19
SDCCAG8
CEP170
LTA4H
WDFY1
PCBP2
NSUN4
AMD1
NDFIP1
RPS19
DHTKD1
MEMO1
LRRC37A3
TMED1
SOD2
RALBP1
GNB2
DGKZ
GPAM
DNAJC11
SAE1
RABGGTA
STX6
CDK12
CYB561D1
XKR7
MED4
ACBD6
SET
ZNF846
STC1
ATG4C
ZNF770
TMEM65
MTMR6
FAM13A
C11orf49
ATG5
CREM
TM9SF4
ZER1
RIF1
HEATR1
PRAME
ZNF3
MRPS15
RPS26
WDR70
PHF21A
FAIM
MTOR
ATP5MC3
RPL38
INTS4
P3H4
RAB5C
CIZ1
LIPA
CRBN
IQSEC3
LNPEP
ALG14
GARS1
RFX7
QRICH1
RESF1
INKA2
DDX20
ZNF527
COG2
GEMIN7
FABP6
DCT
PPP1R11
EEA1
TMBIM6
FOXJ3
ATAD2
ZMYM5
ABCG1
RAP2C
CBWD3
MEX3C
PPIL3
NIF3L1
FAM160B1
INTS2
DISP1
CFAP20
C2CD5
NMRAL1
HMOX2
CHMP7
TRMT61B
MMACHC
CCDC163
SREK1IP1
CWC27
SETD1A
YBEY
MCM3AP
MAN2A1
PPIH
METTL26
TSPAN10
NPLOC4
ANO8
HIBADH
SENP1
PFKM
BAIAP2
ANKRD36
VWA8
RBIS
PET117
KAT14
CCDC107
RWDD1
IPO13
DNAJC24
DCDC1
WTAP
NEK4
KDM3B
TNPO3
CSTF2T
TMEM167B
SH2B1
HNRNPH1
ZNF827
KNL1
TMBIM1
POLDIP3
ARMH3
SECISBP2L
CPLX2
ZNF783
ARL8B
RPL29
SLC30A6
LARS2
CCDC174
NOL12
TRAF6
RAG1
UFD1
CDC45
RGPD1
SMIM12
DDX27
AASDH
ASNS
CBR1
RAD52
DHX8
MRPL42
ZC3HC1
CUL5
ZNF529
PPP6C
VRK2
WARS2
RHOT2
THG1L
MEGF8
DPYD
ZNF518A
STRADA
NARS1
ABLIM1
HDAC1
ABCA3
TMEM208
LRRC29
RSAD1
ZNF341
ISY1-RAB43
ISY1
THOC5
SELENOT
RETSAT
NOTCH2NLB
WDPCP
MDH1
RUNX2
CLUL1
DDX41
METAP1
MFSD8
ABHD18
GOSR1
COIL
TNRC6B
PHB2
UCHL5
RO60
NOL11
PSTPIP1
FBXW7
DCP1B
GDPD5
PSMA1
DHRS13
PTPRCAP
UIMC1
GOT2
MAD1L1
NDUFC2-KCTD14
NDUFC2
ZNF350
SNX16
PLK3
ZNF286A
PARK7
MKRN2
ADAR
TBC1D22A
TRAM2
RRP15
RBSN
PRMT3
STAT6
ALDH9A1
MIER1
SIRT4
PPP1R8
ZNF212
ANXA2R
FUT10
CLPTM1
C19orf48
ATP5MPL
AGGF1
NDUFAB1
UBE2L3
HES3
METTL8
DCAF17
SFSWAP
SLC25A53
YJU2
EIF4A2
RGPD2
SNX19
PES1
CELF1
BMT2
ZNF331
ZC3H6
SCP2
GCFC2
SEC31A
MIGA1
DAB1
TSC22D4
STXBP3
ZKSCAN2
POLR1F
ZNF398
PPRC1
ZNF461
FKBP5
S100A4
CGGBP1
ASF1A
NOTCH2
CALM1
TMEM30A
ZNF383
LZTR1
SLC39A6
PRRC2B
FIS1
RPL26
TMED2
TNFAIP8L1
EXOC2
NDUFA4
KCNH1
OSGEPL1
ARL14EP
TYSND1
NUDT15
EIF1B
RCOR3
ZNF585A
SLC38A2
GFM1
CDKN2AIPNL
WDR47
TBL3
STAT1
SPATA13
UBE2D3
ZNF570
GTF2B
VAPB
HDAC2
FGD3
HECTD1
TMTC2
NFE2L2
FNTB
AP1G1
SPHK2
RPL18
CCNL1
AHCYL1
ZDHHC6
VTI1A
SERBP1
EIF5A2
ZNF302
ZZEF1
SIRT6
CYB5D2
ANKRD24
VPS13D
RPL22
CRLF3
MRPL38
RAB11A
SYPL1
WDR24
NDUFA6
ING3
CALM2
PSMD11
MRPL45
ZNF25
SASS6
APEH
KDM5C
EEFSEC
BRIX1
ZNF569
THOC3
NUP214
CLASP2
ZNF510
ADNP
GTPBP10
UBOX5
FASTKD5
TADA1
ZBTB20
ANGEL1
TTC14
HIF1AN
TBPL1
UGCG
PIK3R1
ZW10
YAP1
MGST3
PDCD2
NUTF2
CENPT
SCYL3
CEP41
PSMG1
PPA2
LIG4
H4C8
SRFBP1
FAM25E
PIKFYVE
PDE8A
VAMP4
RPS12
HARS2
HARS1
OGT
RPA2
APRT
ZNF44
SRSF11
MAML1
TRNAU1AP
EIF2S1
ATP6V1D
POLR3A
KLHDC10
ST6GAL1
TMEM128
ZNF28
CYP4V2
VPS72
KANSL1
ZNHIT6
PEMT
MKNK1
WASHC2C
YWHAB
INO80D
RINT1
C7orf26
RHOT1
RABEP1
CYREN
USO1
CSDE1
RPL6
TTC21B
COMMD1
TINF2
TRMO
SNX5
MGME1
RPS13
YARS2
GDAP1
USP3
TMEM116
ERP29
EFHD1
GNAL
OTUD7B