ChIP-Atlas: Target genes

Potential target genes for SOX2

Query protein: SOX2
Distance from TSS: ± 1 kb  ± 5 kb  ± 10 kb
Sort key: SRX011616 | hESC H1
 
Color legends
  1000 750 500 250 1 0  (Values = Binding scores of MACS2 and STRING)

Download: TSV (text)
Links: Movie and Document for ChIP-Atlas Target Genes
SOX2's Target genes

◢ SOX2: Average

◢ SRX130061: BJ

◢ SRX10407083: Esophageal squamous carcinoma cell line

◢ SRX10407084: Esophageal squamous carcinoma cell line

◢ SRX5286338: ES cells

◢ SRX5286339: ES cells

◢ SRX5286342: ES cells

◢ SRX5286343: ES cells

◢ SRX11904439: H29

◢ SRX11904440: H29

◢ SRX6852812: HCC2814

◢ SRX277137: HCC95

◢ SRX6852810: HCC95

◢ SRX3205373: Head and neck squamous cell carcinoma 

◢ SRX702105: hESC derived mesendodermal cells

◢ SRX702106: hESC derived mesendodermal cells

◢ SRX702108: hESC derived mesendodermal cells

◢ SRX1047416: hESC derived neural cells

◢ SRX11919277: hESC derived neuromesodermal cells

◣ SRX011616: hESC H1

◢ SRX1047413: hESC H9

◢ SRX277140: hESC H9

◢ SRX6101128: hESC H9

◢ SRX6101129: hESC H9

◢ SRX266860: hESC HUES64

◢ SRX266861: hESC HUES64

◢ SRX702107: hESC HUES64

◢ SRX702109: hESC HUES64

◢ SRX20532164: hESC HUES8

◢ SRX20532165: hESC HUES8

◢ SRX5286340: hESC WIBR2

◢ SRX5286341: hESC WIBR2

◢ SRX5286344: hESC WIBR2

◢ SRX10101684: hESC WIBR3

◢ SRX10101685: hESC WIBR3

◢ SRX8026053: hESC WIBR3

◢ SRX8026055: hESC WIBR3

◢ SRX968908: iPSC derived neural cells

◢ SRX968909: iPSC derived neural cells

◢ SRX968910: iPSC derived neural cells

◢ SRX968911: iPSC derived neural cells

◢ SRX968912: iPSC derived neural cells

◢ SRX1813586: iPS cells

◢ SRX1813587: iPS cells

◢ SRX20140858: iPS cells

◢ SRX20140859: iPS cells

◢ SRX512370: iPS cells

◢ SRX6852811: KNS-62

◢ SRX10035162: KYSE-140

◢ SRX10407085: KYSE-70

◢ SRX277131: KYSE-70

◢ SRX6852808: LK-2

◢ SRX6852813: LK-2

◢ SRX6852814: LK-2

◢ SRX026880: LN-229

◢ SRX359955: LoVo

◢ ERX2260038: Lung cancer

◢ ERX2260040: Lung cancer

◢ ERX2260044: Lung cancer

◢ ERX2260046: Lung cancer

◢ SRX2731713: Lung cancer cell line

◢ SRX6750797: MDA-MB-231

◢ SRX6750798: MDA-MB-231

◢ SRX1813580: MRC-5

◢ SRX1813581: MRC-5

◢ SRX1813582: MRC-5

◢ SRX1813583: MRC-5

◢ SRX1813584: MRC-5

◢ SRX1813585: MRC-5

◢ SRX2732210: MRC-5

◢ SRX2732211: MRC-5

◢ SRX5771664: N2102Ep

◢ SRX5771666: N2102Ep

◢ SRX5771668: N2102Ep

◢ SRX11904443: NCI-H1836

◢ SRX11904444: NCI-H1836

◢ SRX6852809: NCI-H520

◢ SRX11904441: NCI-H82

◢ SRX11904442: NCI-H82

◢ SRX10445285: Neural crest cells

◢ SRX10445293: Neural crest cells

◢ SRX10445303: Neural crest cells

◢ SRX10445312: Neural crest cells

◢ SRX20140860: Neural progenitor cells

◢ SRX20140861: Neural progenitor cells

◢ SRX20140862: Neural progenitor cells

◢ SRX20140890: Neural progenitor cells

◢ SRX20140891: Neural progenitor cells

◢ SRX20140892: Neural progenitor cells

◢ SRX5716451: Neural progenitor cells

◢ SRX5716452: Neural progenitor cells

◢ SRX5716453: Neural progenitor cells

◢ SRX330107: ReN-VM

◢ SRX330108: ReN-VM

◢ SRX277134: T.T

◢ SRX3367070: TE-5

◢ SOX2: STRING

TRIM24
SLTM
TDGF1
PF4
PPBP
FRAT2
LARP1
ARID2
PALM2AKAP2
HHIP
REST
SOX2
EXOSC9
MRS2
ANKRD1
NECTIN1
SHCBP1L
SLBP
SRPK1
SNX19
PGBD5
SLC24A3
NRG1
SMARCA2
PHF3
MTRNR2L1
CCN2
CD24
PSIP1
RPH3A
COTL1
ACSL6
NANOG
SMIM14
DPPA5
CNOT6
CCDC60
HOXD13
HOXD12
ANKRD36
SOX6
GDF11
C11orf58
LRRN1
TNFRSF11A
CACNA2D1
MIB1
TALDO1
TMPRSS11E
TMSB4Y
SOX5
SIX3
NRXN3
PRRC2B
GLIPR2
RAPGEF4
MEN1
SYN3
GABRB3
AFTPH
MAD2L2
DRAXIN
MTRNR2L8
PLAGL1
MTRNR2L10
TULP2
NUCB1
CPNE4
LRRTM4
TMX1
TMEM107
CACHD1
TTLL6
ARHGEF38
MTRNR2L2
MSH3
DHFR
SLC2A14
RAD54B
FSBP
CCNT1
FZD8
RASA1
TWIST1
C4orf50
RAG2
IFTAP
DEFB114
DEFB113
SGMS2
MTHFD1L
MEGF10
SLC22A16
MCC
ZFYVE1
CYP27A1
NXPH2
ZNF781
ETV3
PXDC1
MYO1E
DUX4
FGR
SLC25A23
CRB3
SDS
RCN1
PARP1
MDN1
FMO2
PDHA2
KCNH1
MAN1B1
PITX2
SFXN1
CER1
RASGEF1B
OBI1
BMPR1B
SGMS1
ADD2
BCAT1
ZIC4
SLC2A12
BNIP3
KLK10
ZNF608
L1TD1
FBXW11
BIN2
TMCC1
POSTN
KLF5
TLE3
NGF
CTSF
WLS
CDC42
SALL3
TRPM3
LITAF
MTRNR2L6
NSUN7
PLA2G4A
SLC25A16
LRFN3
ITM2B
TAX1BP1
NCOR2
CASQ2
FLAD1
THRB
UBD
MVB12A
GDF5
NR2F2
RGPD6
SNRNP25
POLR3K
HCK
ACCS
FAM24B
RGS2
ILF2
TMEM114
HIPK3
CELA2A
PHC1
H2BC21
H2AC21
H2AC20
CDH12
HES3
ICMT
OAZ2
CDS1
FAM178B
UQCRHL
BCAT2
GSN
NKX1-2
INAFM2
MED12
CNPY1
GCNT2
GUCA1A
ENOX1
ETS1
ATAD2
HLA-F
VCAN
ZFAND6
SH3KBP1
NTRK2
HMOX1
MRPL20
PPP2R3A
ANGPT1
PTGER3
IBTK
TMC5
PLAAT4
SLC13A3
JPT1
LRGUK
CRADD
PHF8
TRANK1
SORT1
FOXN3
ZNF281
PCDHA10
FBXL19
GABRQ
FRMD3
GALM
SLC6A11
FGFR2
CYP2S1
POLQ
QTRT1
OR11H2
NEUROG3
ZBTB39
FGF1
CTBS
CLDN23
N4BP1
OR2H2
ARSA
CIITA
KDM7A
ECI2
RMND5B
RIF1
SCGB3A2
DENR
DNAJC7
FRZB
ERBB2
PGAP3
RNF43
SERINC5
ANKRD36C
GPRC5B
UPF1
C1orf198
HOXD1
IFNA1
GIMAP5
ZNF438
RBAK-RBAKDN
RBAK
CASP7
AK4
RASGRF2
PRR5L
P2RY14
COMMD9
PRTFDC1
LRAT
MFSD4B
TOX3
CELF4
FOXP1
DDX17
RNASE9
LMCD1
CHRNA9
GRHL2
MAPKAPK2
PRICKLE1
TNRC6A
LIMS1
SIRT4
RDH12
CFTR
ZNF532
CNMD
GCSAM
SORBS2
LHX8
TSKS
AP2A1
PTPRN
OR5AR1
SLC2A10
ZSWIM3
ACOT8
BEND3
SPIRE1
SMPDL3B
MUSK
FAM20A
IDO2
DSC2
NDUFAB1
NRARP
MTF2
CDX2
FAM227A
CBY1
NES
NAV2
SACS
PIPOX
METTL11B
DNMBP
ZNF483
NDUFB5
MRPL47
MUC1
ID3
HMGB1
FRG2C
ZSCAN2
LFNG
AGO1
DUSP6
TCF7L1
PTMA
HDAC9
CD99L2
GOLGA6D
SFRP2
SOCS3
IFRD1
FAM222B
SPATA45
SRRM4
BCOR
SNRPN
FRG2
SAMHD1
MED25
FUZ
BTG2
CLDN9
SMCO1
EDDM3B
POU5F1
GAD2
GRK6
NOTCH1
APOBEC3F
DNMT3B
PLPP2
ZFHX3
HESX1
SHISA5
ETV1
SLC7A5
RIIAD1
ZNF775
VENTX
ZNF398
PMEPA1
NADK
NFE2L3
FGD3
UTF1
PSMD9
HPD
DDX43
ETV4
CELF3
GOLGA6B
WFDC8
ZNF343
NCDN
KIAA0319L
CYP1A1
COL23A1
TRAPPC8
GOLGA6A
FGD4
FZR1
LEFTY2
LZTS1
NRCAM
PHF5A
ACO2
GADD45G
USP44
DAGLB
IER5L
FAM120B
MYSM1
FIGNL2
FGF2
LIN28B
KMT2B
FBP1
PPP1R16B
GPSM3
GNAI2
SNURF
CYTH2
GOLGA6C
IL34
IQCH
AAGAB
ESRP1
MCCC1
SLA2
CDC42EP3
KIFBP
PER2
LEFTY1
SAMD5
AMN1
ITPRIP
BFSP1
GXYLT2
FBXO40
PRDM14
FZD2
TRIM2
HGS
ARL16
MACROH2A1
TRIP4
ZFC3H1
THAP2
SNAPC3
CCDC169-SOHLH2
CCDC169
DHDDS
DND1
LRRTM3
WNT5B
SLC35A5
ATG3
LIPK
CRYGB
PDPN
LIMCH1
CCT2
LINGO1
SPRY4
GJA1
SCAF4
TRIML2
ECE1
CEP41
APOBEC3D
APOBEC3C
CAPRIN1
TNRC18
NDUFS5
RFX4
PREX2
SOX14
PRR15
SPIC
ECT2
WBP1L
ST18
DHX32
SYT2
PDCL
LOC100129484
VWCE
UNC13B
CDC14B
TUBB
MDC1
EEF1A1
DGLUCY
PCBP1
CHFR
VOPP1
PIN4
FAM180A
DCAF4L1
AASS
ZNF436
TGIF2-RAB5IF
TGIF2
ONECUT2
GDF3
ALDH1A2
MTM1
DDR1
ZNF335
ITGB5
DLL1
TES
KCNN2
PCLAF
ARIH1
WDFY2
TIMP4
FAM200B
GET3
ZSCAN10
FOXD1
SH3BP4
CARHSP1
DPH6
MAST4
OLFML3
KDM2A
WDHD1
SOCS4
SRCIN1
SRSF7
NEBL
RTN4
ADA2
STK31
HBG2
TJP2
IFT80
DDX3X
TBC1D16
CHN2
MOG
TIAM2
ITGB3
RGS3
ISOC2
TGIF1
CCDC130
PEAK1
HMG20A
PUF60
ZNF304
KDM2B
SENP2
MMACHC
CCDC163
PYCR2
SLC39A8
RBFOX2
PGPEP1
DST
TTYH1
SASH1
PGK1
CAMTA1
TNC
SINHCAF
EXT1
C8orf58
AHCYL2
USP7
DUSP12
ADAR
WDR49
C1orf127
SLC46A1
PTAR1
PLEKHG1
UNK
AEBP2
H3-3B
PNRC1
GTF2I
KCNJ1
AKIRIN2
ALDH7A1
TOMM40
LYPD6B
C10orf95
LMNA
PXMP4
NDST1
SHF
ACVR1
EMSY
DOK7
UGT1A6
C20orf96
ABCB5
UFD1
CDC45
KDM3A
ZCCHC3
TNFSF8
TMEM47
NDUFV1
LRIG1
RTBDN
MAST1
CAPN3
PACSIN2
ZNF536
PDIA4
ANK2
CHD6
ZNF296
GEMIN7
ABL2
PSME3IP1
VANGL2
RASAL2
TRIB2
LIN28A
SIX2
FZD5
KLF3
PITPNM2
TPST2
TCF7L2
MYCL
SLC20A2
ZNF195
REV3L
ESR2
HES1
TIAM1
TESK2
INSM1
AASDH
SMAD3
PDE1B
AUH
UBAP2
ZNF875
PRODH
LOC102724788
ZBTB45
OSBPL1A
DIDO1
SLC33A1
MARCKS
CCL26
KRT8
GLDC
ZNF600
F11R
TSPAN14
PRKAG2
SLC25A36
ZNF649
FOXO6
NPSR1
MSANTD4
DPPA4
SLFN12
ATP6V1G1
ZNF664-RFLNA
ZNF664
CCDC92
BCL9
RPL8
TRPC4AP
SLC3A2
ZNF565
NTN5
DISP3
SLC23A2
TFE3
MAGEB2
CDH10
TMEM43
DICER1
CHCHD4
SUCO
TRPM1
SAPCD2
LIMK2
CNOT11
MUS81
CFL1
CHMP7
VASH2
KLF7
H3C15
H3C14
H2AC19
H2AC18
NUP160
SOAT1
SPHK1
WDR36
CDYL
TLE1
TFAP2A
TET3
ESX1
PYGB
ZSCAN9
SLC16A13
ABCC10
FAM153B
OR2T1
EPB41L1
KLF6
TMUB2
MTHFD1
MMP10
B3GALT5
STOX2
ZNF428
LRRC47
BFAR
ZBTB18
VPS37B
BORCS6
WDR74
CRISPLD1
CFLAR
CFAP20
PDGFA
LRTM1
DTNA
MAP6
ACSL1
ID1
TNFRSF6B
SELPLG
PIK3R3
INO80D
OGA
CSF2RB
BRINP2
YIPF4
PREP
G3BP1
CNGA1
PAK1
KRTAP3-1
ETV6
STMN1
PLPP3
CPT1A
CTNNA1
LRRTM2
KCNIP4
ZNF517
GAST
CCDC85A
S100A16
GSAP
GPC4
DPP3
TRMT2A
RANBP1
RMND1
ARMT1
ADAMTS16
ARHGAP42
ZNF202
SACM1L
PIK3C2A
ACOXL
BBC3
DACT3
RFLNA
ABCC2
PNCK
APOBEC3G
UBQLN4
LAMTOR2
ZNF814
F11
HSPH1
POLB
ZMAT2
CXADR
CELSR3
TKT
SYNCRIP
NIPAL1
CTNND2
PIF1
IFI16
DHX8
GLI2
SAXO1
TACC2
MEX3D
EPHB3
BAHCC1
CD2BP2
DHRS3
ZFP3
HES5
PANK4
TP53
HMGN1
ANAPC15
CSRNP2
YAF2
MRPL18
NUAK1
SLAMF1
SDCBP
NWD1
KNTC1
TRDMT1
ADGRL2
PLEKHB1
OSBPL2
SHC3
ERMN
MBOAT2
HOXB1
SDHC
SH3GL3
SALL4
ESRRA
CATSPERZ
CAAP1
PSME2
GADD45A
TRIM13
CP
ARSL
MYEOV
PAFAH2
TIAL1
SLCO5A1
PLCH1
LYPLAL1
MEIS2
ISL2
C22orf39
VEZT
FGD6
SPTLC2
MAMDC2
ANKRD6
CD200
ASIP
OR6C3
LLGL1
SLC6A8
AJAP1
RABGAP1L
EMC9
TUT1
NKIRAS2
CCDC200
SLC25A11
RNF167
SNAP23
EPHA4
STRA6
GALNT8
DCLK1
LONRF3
TLX3
RAB30
YLPM1
PPME1
C2CD3
WASF1
CDC40
DDX39A
LEKR1
AIRE
ARID5A
TBC1D23
DPYSL3
AFF1
SDCCAG8
PIMREG
CEP170
ABLIM1
PPP1R18
NRM
KLHL24
ST6GAL1
CAPZB
IL7R
TSPAN5
SPATC1L
TLL2
CCL2
MSL2
CTBP2
RAB23
SRP68
NEDD9
ZNF140
SLC10A2
TPCN2
RNF213
TCHP
OCSTAMP
ERGIC2
C1QTNF7
PTPN12
SYBU
NACAD
CHD7
HELLS
KRBA2
CNR2
ZBTB40
HSBP1L1
RBM20
EXOC7
DTX2
ITPK1
CTTNBP2NL
ITGB1
NEPRO
JUP
ZFAND3
CCDC33
DUSP29
SFPQ
GABBR1
MIDEAS
PRAC2
PRAC1
TCF4
SP5
SNX16
COPZ1
CEP63
ANAPC13
RARB
SPATA22
KIAA1522
LNX1
ARMC12
STK32C
LRRC27
ZNF552
GOLGB1
ZNF627
H4C15
H4C14
AP2B1
SET
PROM1
SMAGP
FAM181A
RAPGEF5
TAGLN3
CHCHD3
ZSWIM4
NCOA7
MATR3
PHLDB2
RRAGA
MEF2C
CCDC88C
ETFB
RAB17
ZDHHC5
LGR6
TP53INP1
RAX
ANKRD40
IL17RD
ATG9B
ASH2L
IFIT3
NKX2-2
TMEFF1
RPL27
LYPD1
CACNA1S
YEATS2
SPATA12
EGR3
SCOC
CLCF1
GJA10
ALDH2
TCAF1
LHFPL4
THEM4
ANP32A
EP300
NATD1
ERVH48-1
PCDHB8
CCDC167
LCOR
PES1
ROR1
PRND
NARF
ARSG
PCYT1B
KIAA0895L
HEXIM2
CDC25A
TMX2
MED19
PRKCA
PEA15
PWWP2A
AKIRIN1
ADRM1
VSIG10
NCBP2AS2
NCBP2
RNF19A
DNAJB1
GABPB2
KRT6B
CUEDC1