ChIP-Atlas: Target genes

Potential target genes for SOX2

Query protein: SOX2
Distance from TSS: ± 1 kb  ± 5 kb  ± 10 kb
Sort key: SRX5286341 | hESC WIBR2
 
Color legends
  1000 750 500 250 1 0  (Values = Binding scores of MACS2 and STRING)

Download: TSV (text)
Links: Movie and Document for ChIP-Atlas Target Genes
SOX2's Target genes

◢ SOX2: Average

◢ SRX130061: BJ

◢ SRX10407083: Esophageal squamous carcinoma cell line

◢ SRX10407084: Esophageal squamous carcinoma cell line

◢ SRX5286338: ES cells

◢ SRX5286339: ES cells

◢ SRX5286342: ES cells

◢ SRX5286343: ES cells

◢ SRX11904439: H29

◢ SRX11904440: H29

◢ SRX6852812: HCC2814

◢ SRX277137: HCC95

◢ SRX6852810: HCC95

◢ SRX3205373: Head and neck squamous cell carcinoma 

◢ SRX702105: hESC derived mesendodermal cells

◢ SRX702106: hESC derived mesendodermal cells

◢ SRX702108: hESC derived mesendodermal cells

◢ SRX1047416: hESC derived neural cells

◢ SRX11919277: hESC derived neuromesodermal cells

◢ SRX011616: hESC H1

◢ SRX1047413: hESC H9

◢ SRX277140: hESC H9

◢ SRX6101128: hESC H9

◢ SRX6101129: hESC H9

◢ SRX266860: hESC HUES64

◢ SRX266861: hESC HUES64

◢ SRX702107: hESC HUES64

◢ SRX702109: hESC HUES64

◢ SRX20532164: hESC HUES8

◢ SRX20532165: hESC HUES8

◢ SRX5286340: hESC WIBR2

◣ SRX5286341: hESC WIBR2

◢ SRX5286344: hESC WIBR2

◢ SRX10101684: hESC WIBR3

◢ SRX10101685: hESC WIBR3

◢ SRX8026053: hESC WIBR3

◢ SRX8026055: hESC WIBR3

◢ SRX968908: iPSC derived neural cells

◢ SRX968909: iPSC derived neural cells

◢ SRX968910: iPSC derived neural cells

◢ SRX968911: iPSC derived neural cells

◢ SRX968912: iPSC derived neural cells

◢ SRX1813586: iPS cells

◢ SRX1813587: iPS cells

◢ SRX20140858: iPS cells

◢ SRX20140859: iPS cells

◢ SRX512370: iPS cells

◢ SRX6852811: KNS-62

◢ SRX10035162: KYSE-140

◢ SRX10407085: KYSE-70

◢ SRX277131: KYSE-70

◢ SRX6852808: LK-2

◢ SRX6852813: LK-2

◢ SRX6852814: LK-2

◢ SRX026880: LN-229

◢ SRX359955: LoVo

◢ ERX2260038: Lung cancer

◢ ERX2260040: Lung cancer

◢ ERX2260044: Lung cancer

◢ ERX2260046: Lung cancer

◢ SRX2731713: Lung cancer cell line

◢ SRX6750797: MDA-MB-231

◢ SRX6750798: MDA-MB-231

◢ SRX1813580: MRC-5

◢ SRX1813581: MRC-5

◢ SRX1813582: MRC-5

◢ SRX1813583: MRC-5

◢ SRX1813584: MRC-5

◢ SRX1813585: MRC-5

◢ SRX2732210: MRC-5

◢ SRX2732211: MRC-5

◢ SRX5771664: N2102Ep

◢ SRX5771666: N2102Ep

◢ SRX5771668: N2102Ep

◢ SRX11904443: NCI-H1836

◢ SRX11904444: NCI-H1836

◢ SRX6852809: NCI-H520

◢ SRX11904441: NCI-H82

◢ SRX11904442: NCI-H82

◢ SRX10445285: Neural crest cells

◢ SRX10445293: Neural crest cells

◢ SRX10445303: Neural crest cells

◢ SRX10445312: Neural crest cells

◢ SRX20140860: Neural progenitor cells

◢ SRX20140861: Neural progenitor cells

◢ SRX20140862: Neural progenitor cells

◢ SRX20140890: Neural progenitor cells

◢ SRX20140891: Neural progenitor cells

◢ SRX20140892: Neural progenitor cells

◢ SRX5716451: Neural progenitor cells

◢ SRX5716452: Neural progenitor cells

◢ SRX5716453: Neural progenitor cells

◢ SRX330107: ReN-VM

◢ SRX330108: ReN-VM

◢ SRX277134: T.T

◢ SRX3367070: TE-5

◢ SOX2: STRING

SLA2
SMARCA2
ZNF483
APOBEC3F
TMPRSS11E
NRARP
FLAD1
MED12
DND1
DPPA5
REST
VCAN
VENTX
GDF11
NRG1
MFSD4B
FAM222B
MAP2K3
ZSWIM3
ACOT8
PHC1
TMC5
ESR2
RHOB
SOX6
ASIP
ALDH1A2
EDDM3B
TRIP4
PCLAF
TDGF1
RCN1
FRG2C
DUX4
SAMHD1
SOX2
MRPL20
MTHFD1L
ISOC2
BCOR
CDX2
SPIC
ZNF608
PEAK1
HMG20A
TRPC4AP
WFDC8
ARHGEF38
CAAP1
SHCBP1L
ID3
GAD2
SNRPN
DAGLB
MACROH2A1
GIMAP5
PSMD9
HPD
DDX43
WDR25
WARS1
ARSL
TCF7L1
SLTM
MTRNR2L1
SACS
PRICKLE1
SLC35A5
ATG3
KIF11
HESX1
IL34
FZR1
BEND3
FAM227A
CBY1
PRMT2
FGF1
POU5F1
LEFTY2
KIF15
KIAA1143
NANOG
CELF4
NPSR1
OPALIN
FZD8
PITPNM2
GATA3
FRG2
TPCN2
RMND5B
DUSP6
ECE1
CNGA1
NIPAL1
FAM200B
SFRP2
TRAPPC8
ITGB3
HELLS
CLCN4
CRYGB
ACOXL
ZNF398
CAPN3
ETS1
ZNF781
ZMAT2
LEFTY1
APOBEC3D
APOBEC3C
GABRQ
TSKS
AP2A1
RASGRF2
DUSP29
GSN
ZFYVE1
APOBEC3G
LIPK
PRDM14
NTRK2
ZSCAN2
ANKRD1
SLC2A14
UTF1
TRIML2
ALDH2
RAB40AL
FGD3
ITGB5
BTG2
ZNF343
SLC35F6
MBOAT2
PIPOX
DCAF4L1
CSDE1
NR6A1
UGT1A6
IFRD1
UHRF1BP1L
OR5AR1
LRRTM4
NACAD
NBDY
SLC38A9
NDUFV1
PAK1
PLPP3
ARHGAP42
MTRNR2L8
SMAGP
PUF60
RASA1
TUBB
MDC1
CYP2S1
C10orf95
PROM1
STOM
MYSM1
ZNF532
TET3
SCHIP1
NCOA5
GLDC
SGMS2
SLC7A5
OR2G2
SNURF
GTF2I
H3C15
H3C14
H2AC19
H2AC18
PCDHGB2
PCDHGA5
PEA15
MTF2
SYT2
ZNF600
CACHD1
SPATA45
LHFPL5
CLPS
SRSF12
UBAP2
RPL21
EXT1
CFLAR
RNF17
CD99L2
GOLGA6D
SLC23A2
OSBPL2
CSGALNACT1
LYPD6B
BRINP2
YIPF4
TRIM24
SRRM4
CCDC169-SOHLH2
CCDC169
GALNT8
PSME3IP1
DNMBP
MDN1
ADAMTS16
CHGB
USP17L5
USP17L30
USP17L29
USP17L28
USP17L27
USP17L26
USP17L25
USP17L24
TRIT1
OLAH
SOCS3
CCDC200
PRPS1
ARRDC2
PQBP1
TIMM17B
MED4
CT45A3
PLXDC2
MVB12A
ANKRD40
PTAR1
DNMT3B
HAUS6
KDM5B
HES3
ICMT
BCAT1
DDX39A
FAM136A
DNAJB2
GRIP1
NFE2L3
LRRN1
KIFBP
OR7D2
PMEPA1
PIFO
SYN3
HHIP
STMN2
NES
GOLGA6C
PER2
DIDO1
NDUFAB1
FGF4
TNIP1
MX2
PDCD7
BDH2
FOXP1
SCGB3A2
SYTL3
HDAC9
MICA
PCBP1
YAF2
PTMA
FZD2
CHFR
CCDC130
GJA10
FZD10
RAD54L2
LANCL3
NDUFAF3
DALRD3
LIMS4
LIMS3
RIF1
AHCYL2
GOLGA6B
CER1
AIRE
NAV2
SDHC
EID3
OBI1
FGD4
JPT1
PDCL
UNC13B
WDHD1
SOCS4
ZNF565
CD200
SPRY2
TMEM68
TGS1
PPP3CC
TCHP
PDE1B
CNBP
ARID2
LZTS1
SNX19
ZNF875
AJAP1
PTPN12
GUCA1A
HOXB2
TGIF2-RAB5IF
TGIF2
ERVH48-1
DNTT
BFAR
TNFAIP6
AASS
NEBL
SOX4
NDUFB5
MRPL47
C9orf135
VCPKMT
GOLGA6A
GXYLT1
FBXW11
KLF5
AGO1
NDUFS5
AK4
RTBDN
MAST1
IFIT3
SEC14L5
PLEKHG5
SLC2A11
PRKAA1
HK2
TMEM167B
PIP5K1C
TFCP2L1
CTAGE9
SALL3
RPUSD3
SMCO1
ZNF649
NAB1
PALM2AKAP2
SCAF4
COX20
DENR
PTCH1
UPP1
FOXB1
DNAJC25-GNG10
DNAJC25
EIF4G3
ALDH7A1
GABRB3
TRIB2
NATD1
CDC42EP4
RHBDD2
ZMIZ2
THOC2
SPATA4
GABRR2
RPS10-NUDT3
RPS10
CANT1
PFKP
LAPTM4B
CD22
DHDDS
ST18
E2F7
FAM120B
DLL1
AP2B1
ARSG
HEY2
ADAR
NPS
PRRC2B
CTSF
RESF1
ZFX
HMGB1
LMCD1
FBP1
PTPRN
SLC25A16
CNR2
VSIG10
GINS3
RAB4B
MIA
PRR14L
SFRP1
C16orf78
ABCF3
IRF6
RNF138
FDFT1
SDCBP
NCBP2AS2
NCBP2
ZC3H12B
CLEC9A
CDK17
KRT34
OSBPL8
MSL2
CLDN9
SAMD5
TNRC18
LOC100129484
ADA2
AKIRIN2
PXDC1
RAB30
RNASE10
C19orf25
PRDX3
SH2D4B
SPTBN1
PMS2
AIMP2
MAP1LC3B2
STS
LRIG2
BOLA1
PRUNE2
TMCC3
MRS2
SLC20A2
SPEN
ZNF341
PRCP
SALL4
SELENOT
TBCA
IHH
KLHL12
PPP1R16B
EXOSC9
NCOA7
RPH3A
TALDO1
FGFR2
ONECUT2
PRODH
LOC102724788
DACT3
TKT
LPCAT4
SLCO4C1
ZIC2
SCGB1C1
TRMU
ZFP3
TRIM64B
ARHGEF10
ABL2
THEM4
LCA5
DUSP12
BIN2
SULT6B1
CEBPZOS
TMEM52B
ST8SIA4
FLRT2
DERA
LRP6
CFHR4
PIN4
ADGRL2
BAZ2B
ELP1
ABITRAM
CBFA2T2
KMT2B
PARP1
WDR36
S100A16
MRPL18
EPB41L2
HOXA1
MPI
H3C13
H2BC18
PRR13
SLC6A12
SAMD4B
HOXA2
ZNF805
ITPRIP
SASH1
FAM153B
TNRC6A
LRRC74A
NUCKS1
MS4A12
CSF2RB
NRG2
POGZ
SOX5
PRKAG2
H3C8
H2BC10
DDX3X
MTUS1
PCLO
FAM20A
ZBTB18
IGSF1
DEFB124
PDCD2
GXYLT2
CDC14B
FAM180A
ZSCAN10
RPL8
ZNF517
ADRM1
NUP205
SLC35E4
ISL1
CATIP
RIPOR2
TMX4
ZNF878
MALSU1
SCGB1C2
PPP2R2A
UPK1A
KCNIP4
SLC9A4
CMTM4
TAS2R46
OLFML3
METTL11B
TOX3
MANSC1
HECW2
MOG
STMN1
IQCH
AAGAB
MARCKS
KRT8
SAPCD2
ZIC4
WDR44
UAP1L1
PWWP3A
ZNF518B
SOX15
PTPRF
RASSF8
RNF20
PALMD
SARNP
ORMDL2
TMEM202
ZNF790
TOX
UBE2T
MMACHC
CCDC163
CHD7
TMX2
MED19
NGRN
CLYBL
SLC44A1
TMEM241
ZNF587
TMEM219
NUDT9
SLC16A10
TAX1BP1
ZNF443
OR6C3
RAB3GAP1
LIMCH1
LRRC47
LGR6
TRPM3
NAXD
HYOU1
ZNF607
SYK
SRCIN1
PRR5L
IFITM3
IFITM1
ARHGAP39
MUC1
LFNG
PF4
PPBP
MED25
FUZ
GRK6
NOTCH1
PLPP2
DDX17
ZFHX3
SHISA5
ETV1
RIIAD1
ZNF775
NADK
ETV4
CELF3
NCDN
KIAA0319L
CYP1A1
COL23A1
NRCAM
PHF5A
ACO2
GADD45G
USP44
IER5L
CNPY1
FIGNL2
FGF2
LIN28B
GPRC5B
MTRNR2L2
MSH3
DHFR
GPSM3
GNAI2
CYTH2
ESRP1
MCCC1
FBXL19
CDC42EP3
PLAGL1
FRAT2
AMN1
BFSP1
TMCC1
FBXO40
TRIM2
HGS
ARL16
ZFC3H1
THAP2
SNAPC3
HOXD13
HOXD12
LRRTM3
WNT5B
PDPN
CCT2
LINGO1
SPRY4
GJA1
CEP41
CAPRIN1
MAD2L2
RFX4
PREX2
SOX14
PRR15
ECT2
WBP1L
DHX32
POSTN
VWCE
EEF1A1
CD24
DGLUCY
VOPP1
ZNF436
HMOX1
GDF3
MTM1
DRAXIN
DDR1
ZNF335
TES
KCNN2
ARIH1
L1TD1
WDFY2
TIMP4
GET3
FOXD1
SH3BP4
CARHSP1
DPH6
MAST4
KDM2A
SRSF7
RTN4
STK31
HBG2
TJP2
IFT80
TBC1D16
CHN2
TIAM2
RGS3
TGIF1
ZNF304
SORBS2
KDM2B
SENP2
PYCR2
SLC39A8
RBFOX2
PGPEP1
DST
TTYH1
PGK1
CACNA2D1
CAMTA1
TNC
SINHCAF
C8orf58
USP7
GCNT2
WDR49
C1orf127
SLC46A1
PLEKHG1
UNK
AEBP2
H3-3B
PNRC1
KCNJ1
TOMM40
LMNA
OAZ2
PXMP4
NDST1
SHF
ACVR1
EMSY
DOK7
C20orf96
ABCB5
UFD1
CDC45
KDM3A
ZCCHC3
TNFSF8
TMEM47
LRIG1
PACSIN2
ZNF536
PDIA4
ANK2
FAM24B
CHD6
ZNF296
GEMIN7
CCN2
PSIP1
VANGL2
RASAL2
NECTIN1
LIN28A
SIX2
FZD5
KLF3
TPST2
TCF7L2
MYCL
ZNF195
REV3L
HES1
TIAM1
TESK2
INSM1
AASDH
SMAD3
AUH
ZBTB45
OSBPL1A
SLC33A1
CCL26
F11R
TSPAN14
SLC25A36
FOXO6
PPP2R3A
MSANTD4
DPPA4
SLFN12
ATP6V1G1
ZNF664-RFLNA
ZNF664
CCDC92
BCL9
SLC3A2
NTN5
SMIM14
DISP3
TFE3
MAGEB2
CDH10
TMEM43
DICER1
CHCHD4
PGBD5
NEUROG3
SUCO
TRPM1
LIMK2
CNOT11
MUS81
CFL1
CHMP7
VASH2
KLF7
LRAT
NUP160
SOAT1
SPHK1
RNASE9
CDYL
TLE1
TFAP2A
ESX1
PYGB
ZSCAN9
SLC16A13
ABCC10
OR2T1
EPB41L1
KLF6
TMUB2
MTHFD1
MMP10
B3GALT5
STOX2
ZNF428
VPS37B
BORCS6
WDR74
CRISPLD1
CFAP20
PDGFA
LRTM1
DTNA
MAP6
ACSL1
SORT1
ID1
TNFRSF6B
SELPLG
PIK3R3
INO80D
OGA
NXPH2
PREP
G3BP1
KRTAP3-1
ETV6
CPT1A
CTNNA1
LRRTM2
GAST
CCDC85A
GSAP
GPC4
DPP3
TRMT2A
RANBP1
RMND1
ARMT1
ZNF202
SACM1L
PIK3C2A
LRGUK
BBC3
RFLNA
ABCC2
PNCK
UBQLN4
LAMTOR2
DEFB114
DEFB113
ZNF814
F11
HSPH1
POLB
CXADR
CELSR3
SYNCRIP
CTNND2
PIF1
IFI16
DHX8
GLI2
SAXO1
TACC2
MEX3D
EPHB3
BAHCC1
ACSL6
CD2BP2
DHRS3
HES5
PANK4
TP53
HMGN1
ANAPC15
CSRNP2
NUAK1
SLAMF1
NWD1
KNTC1
TRDMT1
PLEKHB1
SHC3
ERMN
HOXB1
SH3GL3
ESRRA
CATSPERZ
DNAJC7
PSME2
GADD45A
TRIM13
CP
MYEOV
PAFAH2
ERBB2
TIAL1
SLCO5A1
PLCH1
LYPLAL1
MEIS2
ISL2
C22orf39
VEZT
UPF1
FGD6
SPTLC2
MAMDC2
ANKRD6
LLGL1
SLC6A8
RABGAP1L
EMC9
TUT1
NKIRAS2
SLC25A11
RNF167
SNAP23
EPHA4
STRA6
DCLK1
LONRF3
TLX3
YLPM1
PPME1
C2CD3
WASF1
CDC40
TMEM107
LEKR1
ARID5A
TBC1D23
DPYSL3
TLE3
AFF1
SDCCAG8
PIMREG
CEP170
ABLIM1
PPP1R18
NRM
KLHL24
ST6GAL1
CNMD
PGAP3
CAPZB
IL7R
TSPAN5
SPATC1L
TLL2
CCL2
RNF43
CTBP2
RAB23
SRP68
NEDD9
ZNF140