ChIP-Atlas: Target genes

Potential target genes for SOX2

Query protein: SOX2
Distance from TSS: ± 1 kb  ± 5 kb  ± 10 kb
Sort key: SRX6750797 | MDA-MB-231
 
Color legends
  1000 750 500 250 1 0  (Values = Binding scores of MACS2 and STRING)

Download: TSV (text)
Links: Movie and Document for ChIP-Atlas Target Genes
SOX2's Target genes

◢ SOX2: Average

◢ SRX130061: BJ

◢ SRX10407083: Esophageal squamous carcinoma cell line

◢ SRX10407084: Esophageal squamous carcinoma cell line

◢ SRX5286338: ES cells

◢ SRX5286339: ES cells

◢ SRX5286342: ES cells

◢ SRX5286343: ES cells

◢ SRX11904439: H29

◢ SRX11904440: H29

◢ SRX6852812: HCC2814

◢ SRX277137: HCC95

◢ SRX6852810: HCC95

◢ SRX3205373: Head and neck squamous cell carcinoma 

◢ SRX702105: hESC derived mesendodermal cells

◢ SRX702106: hESC derived mesendodermal cells

◢ SRX702108: hESC derived mesendodermal cells

◢ SRX1047416: hESC derived neural cells

◢ SRX11919277: hESC derived neuromesodermal cells

◢ SRX011616: hESC H1

◢ SRX1047413: hESC H9

◢ SRX277140: hESC H9

◢ SRX6101128: hESC H9

◢ SRX6101129: hESC H9

◢ SRX266860: hESC HUES64

◢ SRX266861: hESC HUES64

◢ SRX702107: hESC HUES64

◢ SRX702109: hESC HUES64

◢ SRX20532164: hESC HUES8

◢ SRX20532165: hESC HUES8

◢ SRX5286340: hESC WIBR2

◢ SRX5286341: hESC WIBR2

◢ SRX5286344: hESC WIBR2

◢ SRX10101684: hESC WIBR3

◢ SRX10101685: hESC WIBR3

◢ SRX8026053: hESC WIBR3

◢ SRX8026055: hESC WIBR3

◢ SRX968908: iPSC derived neural cells

◢ SRX968909: iPSC derived neural cells

◢ SRX968910: iPSC derived neural cells

◢ SRX968911: iPSC derived neural cells

◢ SRX968912: iPSC derived neural cells

◢ SRX1813586: iPS cells

◢ SRX1813587: iPS cells

◢ SRX20140858: iPS cells

◢ SRX20140859: iPS cells

◢ SRX512370: iPS cells

◢ SRX6852811: KNS-62

◢ SRX10035162: KYSE-140

◢ SRX10407085: KYSE-70

◢ SRX277131: KYSE-70

◢ SRX6852808: LK-2

◢ SRX6852813: LK-2

◢ SRX6852814: LK-2

◢ SRX026880: LN-229

◢ SRX359955: LoVo

◢ ERX2260038: Lung cancer

◢ ERX2260040: Lung cancer

◢ ERX2260044: Lung cancer

◢ ERX2260046: Lung cancer

◢ SRX2731713: Lung cancer cell line

◣ SRX6750797: MDA-MB-231

◢ SRX6750798: MDA-MB-231

◢ SRX1813580: MRC-5

◢ SRX1813581: MRC-5

◢ SRX1813582: MRC-5

◢ SRX1813583: MRC-5

◢ SRX1813584: MRC-5

◢ SRX1813585: MRC-5

◢ SRX2732210: MRC-5

◢ SRX2732211: MRC-5

◢ SRX5771664: N2102Ep

◢ SRX5771666: N2102Ep

◢ SRX5771668: N2102Ep

◢ SRX11904443: NCI-H1836

◢ SRX11904444: NCI-H1836

◢ SRX6852809: NCI-H520

◢ SRX11904441: NCI-H82

◢ SRX11904442: NCI-H82

◢ SRX10445285: Neural crest cells

◢ SRX10445293: Neural crest cells

◢ SRX10445303: Neural crest cells

◢ SRX10445312: Neural crest cells

◢ SRX20140860: Neural progenitor cells

◢ SRX20140861: Neural progenitor cells

◢ SRX20140862: Neural progenitor cells

◢ SRX20140890: Neural progenitor cells

◢ SRX20140891: Neural progenitor cells

◢ SRX20140892: Neural progenitor cells

◢ SRX5716451: Neural progenitor cells

◢ SRX5716452: Neural progenitor cells

◢ SRX5716453: Neural progenitor cells

◢ SRX330107: ReN-VM

◢ SRX330108: ReN-VM

◢ SRX277134: T.T

◢ SRX3367070: TE-5

◢ SOX2: STRING

TNFRSF6B
FRG2C
NRARP
FRG2
FAM227A
CBY1
SPATC1L
MTF2
COL23A1
MTRNR2L1
TSPAN19
LRRIQ1
EEF1A1
CT45A10
TMEM217
TBC1D22B
RTRAF
GALR1
CYP4F11
PERM1
HGC6.3
SDHAF4
EPN1
TMTC3
CEP290
COX18
ATP5F1E
TFB1M
WASHC4
MUC1
TICAM2
FAM153B
C6orf89
PPIL1
THOC3
UBR2
NBPF1
FAM120B
RBM7
C11orf71
SRBD1
PPARD
FAM240C
EBAG9
SOX2
ZFAND3
CTBS
SNTB1
TSEN15
KIFAP3
MTMR2
ZNF322
BNIP5
ZSCAN9
E2F7
RAB18
SLC36A4
SCFD1
CNTN5
TMEM71
PHF20L1
PPP1R12A
MAST4
FRA10AC1
CMTR1
MOCS1
UTP23
GORAB
PARPBP
NUP37
NUDT4
RNLS
LIPJ
CHMP3
USP49
DYNC2H1
PHACTR2
OPRL1
LKAAEAR1
DUX4
HMGN3
MTRR
FASTKD3
E2F6
TES
SNRPB2
ZNF518A
HFM1
LRRCC1
PDGFD
TMEM14B
MAPK1IP1L
POLR2J3
ME3
FILIP1L
COL19A1
MBIP
BPHL
WDR35
PAG1
CEP126
ANGPTL5
BAG2
JRKL
CCDC82
SH3TC2
AARS2
HDDC2
STARD4
COMMD8
OARD1
NFYA
DPYD
TMED8
SAMD15
RBBP8
LMBRD1
TDP2
ACOT13
EXOG
ZHX3
CBWD5
CBWD3
CBWD6
GPAM
TMEM260
WDHD1
SOCS4
TDRD7
SSH2
EFCAB5
ARHGAP39
ZNF451
C2orf73
HEATR5B
GPATCH11
CCDC59
UTP20
CD83
SRPK1
HLA-DRB1
DYNLRB2
GLRA3
BTBD9
PELO
ITGA1
SMIM14
MYL12A
HLA-A
NBN
ZNF330
FZD6
PTCD2
MRPS27
DYNC2I1
PHLDA1
VAPB
CXCL2
NPDC1
ANKRD36B
ENTPD2
RIOK1
CAGE1
EFHC1
PRKG2
LAMC2
MRE11
ANKRD49
OR1F12
TOMM34
EIF2AK3
ZNF76
INTS7
DTL
CGRRF1
TNFRSF11B
COLEC10
SAYSD1
DR1
HPS5
GTF2H1
SLC44A3
VRK2
ARL14EP
RAD21
CAP2
POLN
HAUS3
COQ2
CCDC34
SRP9
CTNNB1
MCL1
KRTAP2-4
CCDC15
GAGE7
GAGE6
GAGE5
GAGE4
GAGE12I
GAGE12F
GAGE12B
PIK3R1
HTR7
PGBD1
ACYP1
ZC2HC1C
HDGFL1
RNF150
SLC13A3
MRPS18A
TP53RK
PIGC
CEP55
DPH6
LYPLAL1
IP6K2
SESN3
CAST
TMX1
DDX10
TAF7
PIP4P2
KRTAP9-7
RAD51AP2
KRTAP4-3
ABCD3
NUP133
ACTR8
SEL1L
CRYAA2
CRYAA
FER
MAP3K13
ATG14
RALGAPB
PRELID3B
DSCC1
DEDD
NOL8
CENPP
UBE2N
DDX60
PELI2
WBP1L
TUT7
PTPRK
EHBP1
ZNF583
YTHDC2
MSANTD4
TBCA
ZNF326
SCO1
ADPRM
ZNF337
RFESD
FBXO4
ZNF557
ARHGAP24
RIC8B
UTS2B
CCDC50
FAM122A
LSM6
FBXO34
EIF5A2
SYS1
MOCS2
STIMATE-MUSTN1
STIMATE
CFAP299
OXNAD1
DPH3
CD55
KIAA1586
ETAA1
CXCL3
DNAJC9
MTCH1
ARG2
SECISBP2L
KRCC1
FAM135A
DAAM2
ANKRD20A1
ZBTB40
ZNF438
ZSCAN16
TCAIM
BANK1
CNTRL
PAQR3
C5
CARMIL1
LRRC37A3
L3HYPDH
JKAMP
EDEM2
ZC3H12C
ADRB2
TRIM68
WIPI1
ZNF397
SLC25A3
C1orf53
MPHOSPH6
SPATA4
FAM76B
CEP57
PDXDC1
ADGRB3
SCAND1
RBM19
UTP15
ANKRA2
C4orf3
GABRB3
RGS2
LSM4
HSD17B7
RBM12
CPNE1
ERO1A
NIPSNAP3A
FOXP1
ECT2
PTGS2
SMC3
CLEC12A
NUF2
APC
CFAP58
PRICKLE2
CCDC66
SLC25A32
DCAF13
GCH1
TCTE3
ERMARD
NAALAD2
IMMP1L
ELP4
PRPF38B
NET1
SNAPC1
OR1J4
ZSCAN31
CA2
WDPCP
MDH1
TDG
GNPTAB
RGL1
FDXACB1
C11orf1
MTHFD2L
EEF1E1
NT5E
SPTLC2
AKIRIN1
APPL2
ANKRD36C
SMG5
GSTA4
MANBAL
TMEM79
C5orf51
FANCE
TOMM20L
GRPEL2
TTC12
POLE4
NDFIP1
SUMF2
ARIH1
VEZT
FGD6
NTPCR
SELENOK
WDR77
ATP5PB
CETN3
IL6ST
RNF8
CPOX
CCDC6
DENR
SLC3A2
SECISBP2
USP6NL
IFT57
DTNB
CLGN
BBS10
ERO1B
BRAP
ACAD10
NELFCD
TBC1D19
MAP9
ACTA2
XRCC4
TMEM167A
MCM3
MAL2
TIMM23
TEX10
RALGAPA2
MED13L
SLC35B3
ISOC1
LONRF2
ZNF333
UROS
BCCIP
SYNE2
CDC5L
SAV1
OXR1
FAM204A
CEP120
LIMA1
SH3RF2
MND1
EREG
ACAT1
PTP4A1
H2BC15
H2AC15
ZNF25
FANK1
MFAP3
FAM114A2
RAD54B
ARHGAP19
TNFRSF21
CSDE1
CSRP2
CLIP4
CREBZF
CEP295
MSRB2
SLC17A5
PXT1
KCTD20
FAM8A1
FDX1
NEDD1
MYLIP
ZFPM2
CXCL1
PDRG1
EFCAB13
TFIP11
KDM3A
RBBP9
ACOX3
HMGCS1
CLTC
ANKRD46
METTL15
KIF18A
ZNF215
CUL5
TMED7-TICAM2
TMED7
PIGF
CRIPT
MAPKAP1
STAC
PRKD3
TTI1
RPRD1B
ZNF302
RASGRF2
EXT1
CHD6
RFX1
SDE2
MED17
LUZP1
H2BC4
H2AC6
GNPNAT1
KIF3B
AARD
RAB33B
EIF3C
CFL2
ZNF772
SAMD13
C12orf66
EIF3CL
BIRC2
CDC7
CPE
C6orf226
ARL4A
MAD2L1
RABEP1
UGGT2
RTCA
SMIM12
TNC
SERINC3
DERA
PACRGL
NME7
BLZF1
C5orf63
NUDT4B
GMFB
LPCAT3
MAML2
HELB
SEMA3C
RPP30
TTC29
CCDC39
ATOH7
RPF1
DAZ4
DAZ1
HYDIN
TBC1D7-LOC100130357
TBC1D7
MTPN
LUZP6
RABGGTB
CCNH
CHIC2
SPATA17
GPATCH2
MTX2
PTMA
AUH
CDK17
TNPO1
OTUD7B
CLASP2
RPL5
TMEM242
ZBTB17
ZNFX1
PCNX4
CIBAR1
MRPL33
ANXA4
AAK1
NME6
ATP6V1C1
CRYBG3
MALT1
ISCA1
ACTRT3
STK38
HSP90AB1
CTR9
NOTCH2
ARL6
POLR2K
FBXO43
CLDND1
PIGM
TAF9
RAD17
AK6
RAB32
CR1L
TMEM17
SUCLG1
ARMC4
H4C1
H3C1
H1-1
RIPK2
CDC42BPA
HEATR5A
TANC2
NOTCH2NLB
UBE3B
C4orf19
UQCRFS1
ZNF543
ATP6V0A1
TAP1
PSMB9
RAB23
RNF19A
SLC35D1
MOV10
RNF217
TUT4
VPS8
DNAJC25-GNG10
DNAJC25
PPIP5K2
GIN1
MYEF2
CTXN2
SLU7
PTTG1
MED20
BYSL
ANAPC10
ABCE1
ARFGEF2
RBMXL1
KYAT3
UBA6
ENDOD1
PPFIA2
CTNNBL1
PRICKLE4
FRS3
TMEM38B
GXYLT2
MRPL17
CHD1
FRMD6
CHST10
ILVBL
VAMP4
PRR16
GLTP
CCDC112
NT5DC3
ERGIC3
TRPC4AP
SUCO
SF1
GBP2
FAM13C
WDR27
C6orf120
CPD
PRPF39
MRFAP1
EIF2AK2
COG6
ATRN
TGDS
PDP1
TMEM229B
VSNL1
LYSMD3
NCOA5
VPS37C
GOLIM4
ZNF124
TTC13
ATL1
CYRIB
ALS2
SHOC2
BBIP1
NAXE
NCOA3
RFX3
BIRC3
MTRF1L
SGPL1
MAP4K5
DERL1
ABCF1
DYNLRB1
STK17B
LPAR1
PLEKHH1
CACHD1
KNTC1
RPUSD4
FAM118B
DYNLL1
GRIA4
EXPH5
KAT7
SMPDL3A
FANCF
TMEM170B
MSMO1
RNF182
RDH14
CUL7
TTC17
STAMBPL1
MCOLN3
ANKRD42
NHLRC1
C12orf45
KDM3B
SLC25A51
ETS1
MRS2
UNC13B
SFXN1
TNFAIP8
LOC389831
ATXN1
RBM17
NSRP1
TMEM123
TXNDC12
BTF3L4
PPP1CC
RPIA
LGALS3
CHMP4C
ANKRD31
CDC73
HARBI1
ATG13
F13A1
GBE1
PSTK
CEP135
ACSS3
YAP1
DELE1
STX12
ELMOD2
CENPE
C12orf29
FERMT2
VAMP3
OGFRL1
ZNF596
UQCC2
NFYB
SEC24D
PAPSS1
SMAD5
NAA20
SLC8B1
CCDC130
SNX19
ATP6V1G1
SACM1L
EXOC5
AP5M1
AGL
PHF3
PRDM2
NUCKS1
YTHDC1
XRN2
ENTPD7
GTF2IRD2B
SRSF11
H3C3
H2BC3
AKT3
ZNF445
EXOC2
CCN3
SUCLG2
HMGCLL1
PAWR
TRIM32
ASTN2
TXNIP
ZNF266
SHQ1
TSHR
TRDMT1
PPME1
C2CD3
MEF2C
RAD18
ACYP2
MRPS30
CTNNA3
INTS12
GSTCD
ARHGAP5
RNF13
PRDM1
CRB1
ROCK2
POFUT1
PLAGL2
FANCL
HSPA5
GDAP1
PPP1CB
TTC14
LOC100996750
KRTAP4-7
USP38
SNRPF
ASCC3
ZNF32
FBXW2
GMDS
SART3
ISCU
STAM2
MMUT
CENPQ
MPZL3
CYB5R4
LYRM4
FARS2
KIF5B
NDUFAF2
ERCC8
SPIN4
ZSCAN26
MAK
THUMPD2
NPFFR2
CFAP70
C14orf28
C7orf25
COL8A1
PPIC
RASSF6
LRRK2
MICU2
HECTD1
LSM11
VWDE
PLCXD3
DEFB112
AGBL4
MTRNR2L8
CCDC88A
ARF4
ZCCHC4
RORB
NUDCD1
PEX3
ADAT2
CSNK1G3
FAM149A
EXOC6B
BOD1
TET2
PIH1D2
NKAPD1
SEC31A
TRIQK
CTSC
TRPS1
TM9SF3
H3C12
H2BC17
H2AC17
SVBP
ERMAP
IKBIP
APAF1
AK2
BMT2
DNMBP
C2
PTPN2
H1-7
PHF20
CGGBP1
FAM83B
BRINP3
EHMT2
DNAH14
EIF2B2
TDP1
HAPLN1
EIF2D
ZBTB12
ZNF700
CMTM6
ZFYVE9
TAF11
ANKS1A
RNF180
EFCAB11
UHMK1
RAB11FIP2
ZNF654
WWP1
DEPTOR
OR2L13
OR2AJ1
USP2
KRBA2
LRRC74A
ZNF391
CLK4
RWDD1
GPCPD1
SESN1
ZNF706
RAB38
CEP57L1
H2BC11
H2AC11
MIPOL1
DDX46
TFAM
DHRS4
GAGE2C
GAGE2B
GAGE2A
LAMTOR3
LRRFIP2
KTN1
ANKEF1
ZDHHC13
RIOX2
TMEM19
DUSP6
NKIRAS1
RERE
HNRNPUL1
RPL15
COPS3
CNIH1
PPP1R11
SERPINB1
NDUFV2
DDX1
CRY2
CCDC38
AMDHD1
ILKAP
ZPBP2
IKZF3
NEK7
ZKSCAN4
GABRB1
HIF1A
SPCS3
DTWD2
PCED1B
AMIGO2
ARHGEF37
TRIM39
WLS
LDAH
SYNRG
FBXO48
APLF
NUDCD2
HMMR
FBXO9
CILK1
ZNF704
HECTD2
C18orf21
OPN3
CHML
MRPS5
MYL12B
SPANXB1
PKN2
PRDM4
TRIM39-RPP21
RIOK3
DENND1B
PAQR8
SSX2IP
TIFA
FANCD2
BTBD3
NEMF
ZNF346
ZNF432
ACIN1
C14orf119
DNA2
RNF38
IER5
ZNF521
SLC9B1
ATP1B1
USP45
MTERF2
POLR3B
ROBO2
MTCP1
CMC4
BRCC3
FNIP1
SRSF9
SCARB1
ZSWIM7
YWHAB
TTC19
THBS4
MTX3
TMEM251
MOAP1
ZNF343
C20orf96
RNF20
LRP12
MLLT10
SLC36A1
TMX4