ChIP-Atlas: Target genes

Potential target genes for SOX2

Query protein: SOX2
Distance from TSS: ± 1 kb  ± 5 kb  ± 10 kb
Sort key: SRX6852810 | HCC95
 
Color legends
  1000 750 500 250 1 0  (Values = Binding scores of MACS2 and STRING)

Download: TSV (text)
Links: Movie and Document for ChIP-Atlas Target Genes
SOX2's Target genes

◢ SOX2: Average

◢ SRX130061: BJ

◢ SRX10407083: Esophageal squamous carcinoma cell line

◢ SRX10407084: Esophageal squamous carcinoma cell line

◢ SRX5286338: ES cells

◢ SRX5286339: ES cells

◢ SRX5286342: ES cells

◢ SRX5286343: ES cells

◢ SRX11904439: H29

◢ SRX11904440: H29

◢ SRX6852812: HCC2814

◢ SRX277137: HCC95

◣ SRX6852810: HCC95

◢ SRX3205373: Head and neck squamous cell carcinoma 

◢ SRX702105: hESC derived mesendodermal cells

◢ SRX702106: hESC derived mesendodermal cells

◢ SRX702108: hESC derived mesendodermal cells

◢ SRX1047416: hESC derived neural cells

◢ SRX11919277: hESC derived neuromesodermal cells

◢ SRX011616: hESC H1

◢ SRX1047413: hESC H9

◢ SRX277140: hESC H9

◢ SRX6101128: hESC H9

◢ SRX6101129: hESC H9

◢ SRX266860: hESC HUES64

◢ SRX266861: hESC HUES64

◢ SRX702107: hESC HUES64

◢ SRX702109: hESC HUES64

◢ SRX20532164: hESC HUES8

◢ SRX20532165: hESC HUES8

◢ SRX5286340: hESC WIBR2

◢ SRX5286341: hESC WIBR2

◢ SRX5286344: hESC WIBR2

◢ SRX10101684: hESC WIBR3

◢ SRX10101685: hESC WIBR3

◢ SRX8026053: hESC WIBR3

◢ SRX8026055: hESC WIBR3

◢ SRX968908: iPSC derived neural cells

◢ SRX968909: iPSC derived neural cells

◢ SRX968910: iPSC derived neural cells

◢ SRX968911: iPSC derived neural cells

◢ SRX968912: iPSC derived neural cells

◢ SRX1813586: iPS cells

◢ SRX1813587: iPS cells

◢ SRX20140858: iPS cells

◢ SRX20140859: iPS cells

◢ SRX512370: iPS cells

◢ SRX6852811: KNS-62

◢ SRX10035162: KYSE-140

◢ SRX10407085: KYSE-70

◢ SRX277131: KYSE-70

◢ SRX6852808: LK-2

◢ SRX6852813: LK-2

◢ SRX6852814: LK-2

◢ SRX026880: LN-229

◢ SRX359955: LoVo

◢ ERX2260038: Lung cancer

◢ ERX2260040: Lung cancer

◢ ERX2260044: Lung cancer

◢ ERX2260046: Lung cancer

◢ SRX2731713: Lung cancer cell line

◢ SRX6750797: MDA-MB-231

◢ SRX6750798: MDA-MB-231

◢ SRX1813580: MRC-5

◢ SRX1813581: MRC-5

◢ SRX1813582: MRC-5

◢ SRX1813583: MRC-5

◢ SRX1813584: MRC-5

◢ SRX1813585: MRC-5

◢ SRX2732210: MRC-5

◢ SRX2732211: MRC-5

◢ SRX5771664: N2102Ep

◢ SRX5771666: N2102Ep

◢ SRX5771668: N2102Ep

◢ SRX11904443: NCI-H1836

◢ SRX11904444: NCI-H1836

◢ SRX6852809: NCI-H520

◢ SRX11904441: NCI-H82

◢ SRX11904442: NCI-H82

◢ SRX10445285: Neural crest cells

◢ SRX10445293: Neural crest cells

◢ SRX10445303: Neural crest cells

◢ SRX10445312: Neural crest cells

◢ SRX20140860: Neural progenitor cells

◢ SRX20140861: Neural progenitor cells

◢ SRX20140862: Neural progenitor cells

◢ SRX20140890: Neural progenitor cells

◢ SRX20140891: Neural progenitor cells

◢ SRX20140892: Neural progenitor cells

◢ SRX5716451: Neural progenitor cells

◢ SRX5716452: Neural progenitor cells

◢ SRX5716453: Neural progenitor cells

◢ SRX330107: ReN-VM

◢ SRX330108: ReN-VM

◢ SRX277134: T.T

◢ SRX3367070: TE-5

◢ SOX2: STRING

NRARP
SMCO1
PYCR2
HES1
PAMR1
CP
MBNL1
NDUFB5
MRPL47
SOX2
CAPNS2
LMCD1
VWCE
NAV2
FJX1
GRK6
LYRM1
DCUN1D3
PCCA
MTF2
RFLNA
ABCC1
F11R
ARSG
TES
EVA1A
GADD45G
LCLAT1
TNRC18
LOC100129484
LIMK2
ZNF775
PTMA
VIT
HMGB1
MED25
FUZ
CYP1A1
NWD1
PSPH
CCT6A
CDC42EP3
ITGB4
FAM227A
CBY1
MANSC1
KMT2B
ANXA11
SYT2
SLC20A2
HGS
ARL16
EPB41L1
HERPUD2
PLPP2
RAG2
IFTAP
ARID2
ARID5B
JMJD7-PLA2G4B
JMJD7
FGD3
CNP
NFE2L2
UNC13B
MEOX1
NOTCH1
SH3PXD2A
NME1-NME2
NME1
DDX17
CYP2S1
FBXO27
PPP3R1
ETV1
CEP41
DST
TRMT2A
RANBP1
WDFY2
CYP21A2
C1QTNF7
PHF5A
ACO2
PXMP4
CEMIP
TMEM17
RNF13
JUP
ADH7
ZBTB34
SCPEP1
ABCC10
IGFBP2
LAMP1
ST6GALNAC2
MMP10
IQCH
AAGAB
SMAP1
ETV4
OGN
SMCO2
SERPIND1
NDE1
MARF1
SPDL1
ZSCAN2
PER2
HOPX
IKBKB
UBTD2
TMEM132A
IFRD1
IFT80
CUEDC1
TPM1
SMC4
MNT
NFIB
PLD1
SAR1B
NINJ2
SEM1
NIBAN2
PIGX
CEP19
MARCKS
KCNN2
KDM5B
AADAC
PHACTR2
SIX2
ABCC2
PPDPF
MTMR1
CLDN4
SPAST
NUP153
KIF14
SNRPE
EHF
LFNG
SUN1
FIGNL1
IER3IP1
TUT7
ST6GALNAC1
SLC7A5
SLC25A25
HDAC9
EXT1
DDX5
SEMA3D
NAA35
LGALS7
ZFAND3
DENND4A
CCT2
POLR2M
MS4A2
SMARCA2
THG1L
DHX8
LPP
GALNT11
ESYT2
BST1
NRCAM
SHF
YEATS2
NKIRAS1
NR1D2
CSTA
MTRNR2L8
MCCC1
OGA
KCNJ15
ALG9
ADGRL1
PTCHD4
P2RY12
FOXP1
DAGLB
MAST4
GSTO1
ZNF608
SAPCD2
UAP1L1
CHST12
MMP13
RNF152
BFSP1
TUBA1C
TMUB2
CAPRIN1
KRTAP3-1
KLHL6
KRT74
SMARCAD1
NPIPB12
GPR87
UNK
H3-3B
MUS81
CFL1
BAHCC1
OIT3
VGF
TRPV4
EXOC6B
ONECUT2
C20orf96
RPL27
KIAA0040
GGH
SPIN1
VDAC2
LAPTM4B
TP53AIP1
WDR74
ATAT1
OTOGL
MAMDC2
EIF4A2
FGF1
GET3
HMGN1
C3orf20
SPTSSA
IL1F10
PLEKHG1
CCL26
OR7A10
NELFCD
SYNCRIP
TRMT1
NACC1
EFNB2
SH3BP4
TMX2
MED19
TJP2
NTN5
WDR91
FMN1
CLSPN
VEZT
FGD6
CTTNBP2NL
PRKAB2
N4BP1
LDLRAD3
CHD6
CDK5R1
EGFR
CDH13
RAPGEFL1
ETFB
ABLIM1
BAG3
LAMTOR4
PMEPA1
GDF5
CEP250
KIF21B
MSANTD4
MUC20
CPN1
ECT2
LCE3A
ZFC3H1
THAP2
ID1
ACTR2
SLC9A9
CLNS1A
POLB
SLC7A11
UBALD2
ISL2
CTXN3
DLX5
CDIN1
TAL2
COL23A1
ESRRA
CATSPERZ
KRT13
GRAMD1C
KDM2A
ADRM1
RAPGEF5
TNFAIP8
DGLUCY
SCNN1A
LTBR
ERV3-1-ZNF117
ERV3-1
CHMP4B
NPIPB8
SOST
ID3
CLUAP1
SLC4A7
FNIP2
ETF1
SLC6A2
DMRTA2
KRT15
ADH5
PIN4
TCF12
GGT1
ITPKB
ARHGEF19
SNAPC3
GSN
CRISPLD1
VRK2
IQGAP1
CERS3
FRG2C
MTHFD1L
MEF2C
RIMKLB
ZNF277
DOCK4
OSCP1
ZBTB40
ALDH3A1
LNX1
KLHL5
MCM7
AP4M1
SFR1
GPAT4
TMEM254
PIK3C2A
RBBP9
PALMD
TP63
MTUS1
STK31
RNF43
NPIPB13
SPRY4
TSKS
AP2A1
POLR3E
CELA3B
SPRED2
UFD1
CDC45
SHC3
DSC2
DNAJB1
SFXN1
KMT5A
SPO11
TECR
RABGAP1
LTBP2
SPTLC2
RBM47
GNA13
ESRP1
MIDEAS
HNRNPUL1
FAM83G
PELO
ITGA1
IL1A
TJP1
CASD1
PDIA4
BCO1
TIA1
HLTF
HBP1
EHD4
CCDC43
CC2D1B
TPST2
ABTB2
PROSER1
NHLRC3
LOC100505841
SCOC
AMN1
COA6
TGIF1
KIAA1549
COL7A1
ATP6V1E1
BCL2L13
STON1-GTF2A1L
STON1
CAV1
STARD7
RTP1
ALDH7A1
PHAX
ZMIZ2
TUT1
REST
CDX2
NES
TMPRSS11E
SACS
DPPA5
SOX6
PIPOX
ARHGEF38
DUX4
METTL11B
DNMBP
ZNF483
MUC1
CACHD1
AGO1
DUSP6
TCF7L1
NRG1
RMND5B
ANKRD1
LRRN1
CD99L2
GOLGA6D
SFRP2
SOCS3
NTRK2
MTRNR2L1
GIMAP5
FAM222B
SPATA45
PF4
GDF11
PPBP
PHC1
SRRM4
SHCBP1L
BCOR
PRICKLE1
SNRPN
MFSD4B
FRG2
RPH3A
OBI1
SAMHD1
BTG2
OR5AR1
CLDN9
EDDM3B
POU5F1
GAD2
SLTM
FLAD1
ZSWIM3
ACOT8
APOBEC3F
FBXW11
DNMT3B
TALDO1
ZFHX3
TDGF1
MED12
HESX1
SHISA5
RIIAD1
RASGRF2
ETS1
VENTX
ZNF398
MRPL20
NADK
NFE2L3
UTF1
SCGB3A2
PSMD9
HPD
VCAN
DDX43
NANOG
CELF3
GOLGA6B
WFDC8
ZNF343
NCDN
KIAA0319L
TRAPPC8
GOLGA6A
FGD4
FZR1
LEFTY2
LZTS1
RCN1
FGFR2
CER1
USP44
IER5L
CELF4
CNPY1
TRIM24
FAM120B
MYSM1
HES3
FIGNL2
FGF2
FZD8
LIN28B
GPRC5B
MTRNR2L2
MSH3
DHFR
FBP1
PPP1R16B
ICMT
GPSM3
GNAI2
PARP1
SNURF
CYTH2
GOLGA6C
IL34
SOX5
FBXL19
RIF1
SLA2
KIFBP
PLAGL1
LEFTY1
MRS2
FRAT2
SGMS2
SAMD5
ITPRIP
GXYLT2
TMCC1
FBXO40
PRDM14
PALM2AKAP2
FZD2
TRIM2
MACROH2A1
TRIP4
RASA1
HOXD13
HOXD12
CCDC169-SOHLH2
CCDC169
DHDDS
DND1
LRRTM3
WNT5B
SLC35A5
ATG3
LIPK
ZNF532
CRYGB
JPT1
PDPN
MDN1
LIMCH1
LINGO1
GJA1
SCAF4
TRIML2
ECE1
APOBEC3D
APOBEC3C
SLC2A14
MAD2L2
NDUFS5
RFX4
PREX2
SOX14
PRR15
SPIC
WBP1L
ST18
DHX32
PDCL
POSTN
CDC14B
TUBB
MDC1
EEF1A1
CD24
BEND3
PCBP1
CHFR
VOPP1
FAM180A
DCAF4L1
AASS
ZNF436
HMOX1
TGIF2-RAB5IF
TGIF2
TMC5
SALL3
GDF3
ALDH1A2
MTM1
DRAXIN
DDR1
ZNF335
ITGB5
DLL1
LRRTM4
PCLAF
ARIH1
L1TD1
TIMP4
FAM200B
ZSCAN10
FOXD1
CARHSP1
DPH6
GABRQ
OLFML3
WDHD1
SOCS4
SRCIN1
SRSF7
NEBL
RTN4
ADA2
HBG2
ZNF781
DDX3X
TBC1D16
CHN2
MOG
DENR
TIAM2
ITGB3
RGS3
ISOC2
CCDC130
PEAK1
HMG20A
PUF60
ZNF304
SORBS2
KDM2B
SENP2
MMACHC
CCDC163
SYN3
SLC39A8
RBFOX2
PGPEP1
TTYH1
SASH1
PGK1
AK4
CACNA2D1
CAMTA1
TNC
SINHCAF
C8orf58
AHCYL2
USP7
DUSP12
GCNT2
ADAR
WDR49
C1orf127
SLC46A1
PTAR1
AEBP2
PNRC1
GTF2I
KCNJ1
AKIRIN2
TOMM40
LYPD6B
C10orf95
LMNA
OAZ2
NDST1
ACVR1
EMSY
DOK7
UGT1A6
ABCB5
GABRB3
SNX19
KDM3A
ZCCHC3
TNFSF8
TMEM47
NDUFV1
LRIG1
RTBDN
MAST1
CAPN3
PACSIN2
ZNF536
ANK2
FAM24B
ZNF296
GEMIN7
CCN2
PSIP1
ABL2
PSME3IP1
VANGL2
RASAL2
NECTIN1
TRIB2
LIN28A
FZD5
KLF3
PITPNM2
TCF7L2
MYCL
ZNF195
REV3L
ESR2
TIAM1
TESK2
INSM1
AASDH
SMAD3
PDE1B
AUH
UBAP2
ZNF875
PRODH
LOC102724788
ZBTB45
OSBPL1A
DIDO1
SLC33A1
HHIP
MVB12A
KRT8
GLDC
ZNF600
NDUFAB1
TSPAN14
PRKAG2
SLC25A36
ZNF649
FOXO6
NPSR1
PPP2R3A
DPPA4
SLFN12
ATP6V1G1
ZNF664-RFLNA
ZNF664
CCDC92
BCL9
RPL8
TRPC4AP
SLC3A2
ZNF565
SMIM14
DISP3
SLC23A2
TFE3
MAGEB2
CDH10
TMEM43
DICER1
CHCHD4
PGBD5
NEUROG3
SUCO
TRPM1
PXDC1
CNOT11
CHMP7
VASH2
KLF7
PRRC2B
H3C15
H3C14
H2AC19
H2AC18
LRAT
NUP160
SOAT1
SPHK1
WDR36
RNASE9
CDYL
TLE1
TFAP2A
TET3
ESX1
PYGB
ZSCAN9
BIN2
FAM20A
SLC16A13
FAM153B
TNRC6A
OR2T1
KLF6
MTHFD1
B3GALT5
STOX2
ZNF428
LRRC47
BFAR
ZBTB18
VPS37B
BORCS6
CFLAR
CFAP20
PDGFA
LRTM1
DTNA
MAP6
KLF5
ACSL1
SORT1
TNFRSF6B
SELPLG
PIK3R3
BCAT1
INO80D
CSF2RB
BRINP2
NXPH2
YIPF4
PREP
G3BP1
CNGA1
PAK1
ETV6
STMN1
PLPP3
CPT1A
CTNNA1
LRRTM2
KCNIP4
ZNF517
GAST
CCDC85A
S100A16
GSAP
GPC4
DPP3
RMND1
ARMT1
ADAMTS16
ARHGAP42
ZNF202
SACM1L
LRGUK
ACOXL
BBC3
DACT3
PNCK
APOBEC3G
UBQLN4
LAMTOR2
DEFB114
DEFB113
ZNF814
F11
HSPH1
ZMAT2
CXADR
CELSR3
TKT
NIPAL1
CTNND2
PIF1
IFI16
GLI2
SAXO1
TACC2
MEX3D
EPHB3
PTPRN
ACSL6
EXOSC9
CD2BP2
DHRS3
ZFP3
HES5
PANK4
TP53
ANAPC15
CSRNP2
YAF2
MRPL18
TOX3
NUAK1
SLAMF1
SDCBP
KNTC1
TRDMT1
ADGRL2
PLEKHB1
OSBPL2
ERMN
MBOAT2
HOXB1
SDHC
SH3GL3
SALL4
CAAP1
DNAJC7
PSME2
GADD45A
TRIM13
ARSL
MYEOV
PAFAH2
ERBB2
TIAL1
SLCO5A1
PLCH1
LYPLAL1
MEIS2
C22orf39
UPF1
ANKRD6
CD200
ASIP
OR6C3
LLGL1
SLC6A8
AJAP1
RABGAP1L
EMC9
NKIRAS2
CCDC200
SLC25A11
RNF167
SNAP23
EPHA4
STRA6
GALNT8
DCLK1
LONRF3
TLX3
RAB30
YLPM1
PPME1
C2CD3
WASF1
CDC40
TMEM107
DDX39A
LEKR1
AIRE
ARID5A
TBC1D23
DPYSL3
TLE3
AFF1
SDCCAG8
PIMREG
CEP170
PPP1R18
NRM
KLHL24
ST6GAL1
CNMD
PGAP3
CAPZB
IL7R
TSPAN5
ZFYVE1
SPATC1L
TLL2
CCL2
MSL2
CTBP2
RAB23
SRP68
NEDD9
ZNF140
SLC10A2
TPCN2
RNF213
TCHP
FOXN3
OCSTAMP
ERGIC2
PTPN12
SLC25A16
SYBU
NACAD
CHD7
GUCA1A
HELLS
KRBA2
CNR2
GCSAM
HSBP1L1