ChIP-Atlas: Target genes

Potential target genes for SOX2

Query protein: SOX2
Distance from TSS: ± 1 kb  ± 5 kb  ± 10 kb
Sort key: SRX277131 | KYSE-70
 
Color legends
  1000 750 500 250 1 0  (Values = Binding scores of MACS2 and STRING)

Download: TSV (text)
Links: Movie and Document for ChIP-Atlas Target Genes
SOX2's Target genes

◢ SOX2: Average

◢ SRX130061: BJ

◢ SRX10407083: Esophageal squamous carcinoma cell line

◢ SRX10407084: Esophageal squamous carcinoma cell line

◢ SRX5286338: ES cells

◢ SRX5286339: ES cells

◢ SRX5286342: ES cells

◢ SRX5286343: ES cells

◢ SRX11904439: H29

◢ SRX11904440: H29

◢ SRX6852812: HCC2814

◢ SRX277137: HCC95

◢ SRX6852810: HCC95

◢ SRX3205373: Head and neck squamous cell carcinoma 

◢ SRX702105: hESC derived mesendodermal cells

◢ SRX702106: hESC derived mesendodermal cells

◢ SRX702108: hESC derived mesendodermal cells

◢ SRX1047416: hESC derived neural cells

◢ SRX11919277: hESC derived neuromesodermal cells

◢ SRX011616: hESC H1

◢ SRX1047413: hESC H9

◢ SRX277140: hESC H9

◢ SRX6101128: hESC H9

◢ SRX6101129: hESC H9

◢ SRX266860: hESC HUES64

◢ SRX266861: hESC HUES64

◢ SRX702107: hESC HUES64

◢ SRX702109: hESC HUES64

◢ SRX20532164: hESC HUES8

◢ SRX20532165: hESC HUES8

◢ SRX5286340: hESC WIBR2

◢ SRX5286341: hESC WIBR2

◢ SRX5286344: hESC WIBR2

◢ SRX10101684: hESC WIBR3

◢ SRX10101685: hESC WIBR3

◢ SRX8026053: hESC WIBR3

◢ SRX8026055: hESC WIBR3

◢ SRX968908: iPSC derived neural cells

◢ SRX968909: iPSC derived neural cells

◢ SRX968910: iPSC derived neural cells

◢ SRX968911: iPSC derived neural cells

◢ SRX968912: iPSC derived neural cells

◢ SRX1813586: iPS cells

◢ SRX1813587: iPS cells

◢ SRX20140858: iPS cells

◢ SRX20140859: iPS cells

◢ SRX512370: iPS cells

◢ SRX6852811: KNS-62

◢ SRX10035162: KYSE-140

◢ SRX10407085: KYSE-70

◣ SRX277131: KYSE-70

◢ SRX6852808: LK-2

◢ SRX6852813: LK-2

◢ SRX6852814: LK-2

◢ SRX026880: LN-229

◢ SRX359955: LoVo

◢ ERX2260038: Lung cancer

◢ ERX2260040: Lung cancer

◢ ERX2260044: Lung cancer

◢ ERX2260046: Lung cancer

◢ SRX2731713: Lung cancer cell line

◢ SRX6750797: MDA-MB-231

◢ SRX6750798: MDA-MB-231

◢ SRX1813580: MRC-5

◢ SRX1813581: MRC-5

◢ SRX1813582: MRC-5

◢ SRX1813583: MRC-5

◢ SRX1813584: MRC-5

◢ SRX1813585: MRC-5

◢ SRX2732210: MRC-5

◢ SRX2732211: MRC-5

◢ SRX5771664: N2102Ep

◢ SRX5771666: N2102Ep

◢ SRX5771668: N2102Ep

◢ SRX11904443: NCI-H1836

◢ SRX11904444: NCI-H1836

◢ SRX6852809: NCI-H520

◢ SRX11904441: NCI-H82

◢ SRX11904442: NCI-H82

◢ SRX10445285: Neural crest cells

◢ SRX10445293: Neural crest cells

◢ SRX10445303: Neural crest cells

◢ SRX10445312: Neural crest cells

◢ SRX20140860: Neural progenitor cells

◢ SRX20140861: Neural progenitor cells

◢ SRX20140862: Neural progenitor cells

◢ SRX20140890: Neural progenitor cells

◢ SRX20140891: Neural progenitor cells

◢ SRX20140892: Neural progenitor cells

◢ SRX5716451: Neural progenitor cells

◢ SRX5716452: Neural progenitor cells

◢ SRX5716453: Neural progenitor cells

◢ SRX330107: ReN-VM

◢ SRX330108: ReN-VM

◢ SRX277134: T.T

◢ SRX3367070: TE-5

◢ SOX2: STRING

NRARP
NDUFB5
MRPL47
SMCO1
FAM227A
CBY1
DNMBP
MED25
FUZ
NOTCH1
OR13C2
IFRD1
ARIH1
ZSCAN2
IQCH
AAGAB
CYP1A1
TNRC18
LOC100129484
PXMP4
TSKS
AP2A1
COL23A1
ARID2
LMCD1
HMGB1
ISL2
CAPRIN1
CYTH2
SNAPC3
MTF2
PHF5A
ACO2
EFHC1
LFNG
VWCE
HDAC9
GRK6
PDIA4
DDX17
RNF20
EXOC6
MUS81
CFL1
SLC16A13
ZNF775
PIK3C2A
RTBDN
MAST1
CSRNP2
OAZ2
PTMA
FLG
YEATS2
TES
STK31
RIIAD1
CELF3
RFLNA
PLA2G6
NRCAM
ZNF608
UFD1
CDC45
UBTD2
KLHL24
SH3GL3
TXNRD1
ACSL6
ABCC1
MSANTD4
SLC25A36
POLB
MCCC1
KRT8
ANXA11
PHACTR2
HMOX1
TCIM
ESRRA
CATSPERZ
ST6GAL1
DENND4A
CDC42EP3
LYPLAL1
MATR3
RNF187
SOX6
ATAT1
C11orf58
CAPNS2
NUP160
TMEM88B
ANKRD65
FRG2C
TGIF1
TBC1D17
AKT1S1
MIDEAS
MAMDC2
OGA
BORCS6
FMNL3
CEP41
DUX4
GSTO2
RSF1
AAMDC
FBXL19
DDX3X
TESK2
YES1
CHD6
ZFC3H1
THAP2
ITGB1
CEP63
ANAPC13
CCDC116
FOXP1
CPT1A
ABLIM1
ERV3-1-ZNF117
ERV3-1
DST
TSNAXIP1
RANBP10
KDM2A
DISP3
PIF1
PIK3CA
ELOVL5
CCT2
RBBP9
KMT2B
C1QTNF7
SAPCD2
ZBTB6
SPRY4
C3orf20
FOXO6
SAXO1
RRAGA
NKIRAS1
NR1D2
SYNCRIP
YWHAG
PPT1
RNF44
PMEPA1
PIK3R3
DHX8
COL9A2
HMGN1
EP300
HES5
PANK4
PHLDB2
HSPA13
PIPOX
HSPH1
ETV1
TIAL1
ZNF92
ZFX
GSN
POLR3E
MAST4
SINHCAF
ANKRD6
LMNA
NCOA4
NFE2L2
ACTB
SIX2
YLPM1
SOX2
FZD2
MAML1
GET3
HGS
ARL16
EMSY
GADD45A
DKK3
TUBB
MDC1
HACL1
BTD
MCTS1
ANAPC15
NDUFS5
WDR36
RAPGEF5
PRDM2
PGK1
MMP10
GOLGB1
MUC1
MNT
PTCD2
MRPS27
PPP1R2
CBX1
RAB11B
ZNF627
LTF
MARCKS
SHC3
PLCH1
TINAGL1
FBRS
ALDH3A1
MEX3D
PIMREG
AKR1C2
ID2
TMTC3
CEP290
MRPS30
PDIK1L
ECT2
CCDC88A
FRAT1
ZNF697
PYCR2
MIDN
KMT5A
TDGF1
PRSS23
KDM3A
FRG2
FGFR2
RARB
KLHL5
SCNN1A
LTBR
FEM1A
NEBL
SLX4IP
MKKS
ADH7
F11R
STK32C
LRRC27
TRAK2
STRADB
ZNF524
FIZ1
ZNF195
DAGLB
SDHD
ZNF80
CNPY2
NDRG4
NEFH
MMACHC
CCDC163
FZD1
TMEM17
RABL3
GTF2E1
GPR158
CRIP2
NASP
PPP1R9B
PPP4R1
LDB1
ALDH3B1
CBX2
ZNF335
ZFAND3
ADGRL1
ADPGK
MEOX1
PELATON
UBQLN4
LAMTOR2
TLX3
HEXIM2
NSA2
GFM2
COA6
FXR1
GOLIM4
S100A5
S100A4
S100A3
RAB30
CDK5RAP2
ATP2C1
ZSCAN9
TRMT2A
RANBP1
ZDHHC5
PELI1
RTRAF
EIF4A2
MTRNR2L8
SHF
KIAA0895L
TCF12
ETV6
PPIA
WBP1L
ZNF304
RBFOX2
SFPQ
SLC25A11
RNF167
TUT7
KCNJ15
KRT15
ADRM1
CUEDC1
ZCCHC14
MLEC
UNK
H3-3B
HLTF
OARD1
NFYA
RPL15
FAM76B
CEP57
TUBB4B
TUT1
ETFB
TUBA1C
ZBED5
FTSJ1
ZCCHC12
POU2F1
ZNF250
DYNLT3
ABCG1
RNF5
AGPAT1
TMEM249
SLC52A2
FBXL6
ID1
G3BP1
EXOC5
AP5M1
ZBTB26
PROSER1
NHLRC3
ICAM5
ICAM4
PER2
VASH2
DPP3
CREM
EOLA1
PRR15
ADAR
ENOSF1
SH3BP4
ASMTL
ZNF84
SRSF6
LIMK2
VEZT
FGD6
HCN4
WDFY2
CD2BP2
SLC2A4
OGDH
RNF224
RNF208
CYSRT1
CCDC171
MXD1
NATD1
DMRTA2
PIN4
ZBTB40
VGF
MFN1
WDR74
DAAM1
CBR4
SFR1
TLN2
H2AZ2
KRTAP19-2
KRTAP19-1
TOMM40
CFAP77
CDK16
NDE1
MARF1
OIT3
TTF1
H4C15
H4C14
HNRNPDL
ENOPH1
WBP11
C12orf60
NDUFB4
SC5D
HSPA5
C1orf158
FJX1
SNRPE
WDPCP
MDH1
CDC37L1
ZSWIM4
HBP1
STAG3
GPC2
MTHFD1
OTUD5
SPRED2
RRBP1
GET4
MAP3K5
SUFU
ACTR1A
LPIN1
SRPRA
SSR4
IDH3G
PPME1
C2CD3
IREB2
CALR3
C19orf44
UCHL5
RO60
CBLB
EPHB3
IP6K2
SLC4A2
CDK5
ETV5
NFATC3
AMN1
BCL2L11
LZTS1
PGM2L1
TPM1
NWD1
RFX1
UMAD1
NDUFS2
ADAMTS4
SLC35B4
PCM1
FGD3
SPAAR
ACTR2
STK35
HNRNPUL1
EIF1AX
RPUSD4
FAM118B
ESRRG
DUSP4
HNRNPA0
SCAF4
SMARCA2
REST
CDX2
NES
NAV2
TMPRSS11E
SACS
DPPA5
ARHGEF38
METTL11B
ZNF483
ID3
CACHD1
AGO1
DUSP6
TCF7L1
NRG1
RMND5B
ANKRD1
LRRN1
CD99L2
GOLGA6D
SFRP2
SOCS3
NTRK2
MTRNR2L1
GIMAP5
FGF1
FAM222B
SPATA45
PF4
GDF11
PPBP
PHC1
SRRM4
SHCBP1L
BCOR
PRICKLE1
SNRPN
MFSD4B
RPH3A
OBI1
SAMHD1
MTHFD1L
BTG2
OR5AR1
CLDN9
EDDM3B
POU5F1
GAD2
SLTM
FLAD1
ZSWIM3
ACOT8
APOBEC3F
FBXW11
DNMT3B
PLPP2
TALDO1
ZFHX3
MED12
HESX1
SHISA5
SLC7A5
RASGRF2
ETS1
VENTX
ZNF398
MRPL20
NADK
NFE2L3
UTF1
SCGB3A2
PSMD9
HPD
VCAN
DDX43
NANOG
ETV4
GOLGA6B
WFDC8
ZNF343
NCDN
KIAA0319L
TRAPPC8
GOLGA6A
FGD4
FZR1
LEFTY2
RCN1
CER1
GADD45G
USP44
IER5L
CELF4
CNPY1
TRIM24
FAM120B
MYSM1
HES3
FIGNL2
FGF2
FZD8
LIN28B
GPRC5B
MTRNR2L2
MSH3
DHFR
FBP1
PPP1R16B
ICMT
GPSM3
GNAI2
PARP1
SNURF
GOLGA6C
CYP2S1
IL34
ESRP1
SOX5
RIF1
SLA2
KIFBP
PLAGL1
LEFTY1
MRS2
FRAT2
SGMS2
SAMD5
ITPRIP
BFSP1
GXYLT2
TMCC1
FBXO40
PRDM14
PALM2AKAP2
TRIM2
MACROH2A1
TRIP4
RASA1
HOXD13
HOXD12
CCDC169-SOHLH2
CCDC169
DHDDS
DND1
LRRTM3
WNT5B
SLC35A5
ATG3
LIPK
ZNF532
CRYGB
JPT1
PDPN
MDN1
LIMCH1
LINGO1
GJA1
TRIML2
ECE1
APOBEC3D
APOBEC3C
SLC2A14
MAD2L2
RFX4
PREX2
SOX14
SPIC
ST18
DHX32
SYT2
PDCL
POSTN
UNC13B
CDC14B
EEF1A1
CD24
DGLUCY
BEND3
PCBP1
CHFR
VOPP1
FAM180A
DCAF4L1
AASS
ZNF436
TGIF2-RAB5IF
TGIF2
TMC5
ONECUT2
SALL3
GDF3
ALDH1A2
MTM1
DRAXIN
DDR1
ITGB5
DLL1
KCNN2
LRRTM4
PCLAF
L1TD1
TIMP4
FAM200B
ZSCAN10
FOXD1
CARHSP1
DPH6
GABRQ
OLFML3
WDHD1
SOCS4
SRCIN1
SRSF7
RTN4
ADA2
HBG2
TJP2
ZNF781
IFT80
TBC1D16
CHN2
MOG
DENR
TIAM2
ITGB3
RGS3
ISOC2
CCDC130
PEAK1
HMG20A
PUF60
SORBS2
KDM2B
SENP2
SYN3
SLC39A8
PGPEP1
TTYH1
SASH1
AK4
CACNA2D1
CAMTA1
TNC
EXT1
C8orf58
AHCYL2
USP7
DUSP12
GCNT2
WDR49
C1orf127
SLC46A1
PTAR1
PLEKHG1
AEBP2
PNRC1
GTF2I
KCNJ1
AKIRIN2
ALDH7A1
LYPD6B
C10orf95
NDST1
ACVR1
DOK7
UGT1A6
C20orf96
ABCB5
GABRB3
SNX19
ZCCHC3
TNFSF8
TMEM47
NDUFV1
LRIG1
CAPN3
PACSIN2
ZNF536
ANK2
FAM24B
ZNF296
GEMIN7
CCN2
PSIP1
ABL2
PSME3IP1
VANGL2
RASAL2
NECTIN1
TRIB2
LIN28A
FZD5
KLF3
PITPNM2
TPST2
TCF7L2
MYCL
SLC20A2
REV3L
ESR2
HES1
TIAM1
INSM1
AASDH
SMAD3
PDE1B
AUH
UBAP2
ZNF875
PRODH
LOC102724788
ZBTB45
OSBPL1A
DIDO1
SLC33A1
HHIP
CCL26
MVB12A
GLDC
ZNF600
NDUFAB1
TSPAN14
PRKAG2
ZNF649
NPSR1
PPP2R3A
DPPA4
SLFN12
ATP6V1G1
ZNF664-RFLNA
ZNF664
CCDC92
BCL9
RPL8
TRPC4AP
SLC3A2
ZNF565
NTN5
SMIM14
SLC23A2
TFE3
MAGEB2
CDH10
TMEM43
DICER1
CHCHD4
PGBD5
NEUROG3
SUCO
TRPM1
PXDC1
CNOT11
CHMP7
KLF7
PRRC2B
H3C15
H3C14
H2AC19
H2AC18
LRAT
SOAT1
SPHK1
RNASE9
CDYL
TLE1
TFAP2A
TET3
ESX1
PYGB
BIN2
FAM20A
ABCC10
FAM153B
TNRC6A
OR2T1
EPB41L1
KLF6
TMUB2
B3GALT5
STOX2
ZNF428
LRRC47
BFAR
ZBTB18
VPS37B
CRISPLD1
CFLAR
CFAP20
PDGFA
LRTM1
DTNA
MAP6
KLF5
ACSL1
SORT1
TNFRSF6B
SELPLG
BCAT1
INO80D
CSF2RB
BRINP2
NXPH2
YIPF4
PREP
CNGA1
PAK1
KRTAP3-1
STMN1
PLPP3
CTNNA1
LRRTM2
KCNIP4
ZNF517
GAST
CCDC85A
S100A16
GSAP
GPC4
RMND1
ARMT1
ADAMTS16
ARHGAP42
ZNF202
SACM1L
LRGUK
ACOXL
BBC3
DACT3
ABCC2
PNCK
APOBEC3G
DEFB114
DEFB113
ZNF814
F11
ZMAT2
CXADR
CELSR3
TKT
NIPAL1
CTNND2
IFI16
GLI2
TACC2
BAHCC1
PTPRN
EXOSC9
DHRS3
ZFP3
TP53
YAF2
MRPL18
TOX3
NUAK1
SLAMF1
SDCBP
KNTC1
TRDMT1
ADGRL2
PLEKHB1
OSBPL2
ERMN
MBOAT2
HOXB1
SDHC
SALL4
CAAP1
DNAJC7
PSME2
TRIM13
CP
ARSL
MYEOV
PAFAH2
ERBB2
SLCO5A1
MEIS2
C22orf39
UPF1
SPTLC2
CD200
ASIP
OR6C3
LLGL1
SLC6A8
AJAP1
RABGAP1L
EMC9
NKIRAS2
CCDC200
SNAP23
EPHA4
STRA6
GALNT8
DCLK1
LONRF3
WASF1
CDC40
TMEM107
DDX39A
LEKR1
AIRE
ARID5A
TBC1D23
DPYSL3
TLE3
AFF1
SDCCAG8
CEP170
PPP1R18
NRM
CNMD
PGAP3
CAPZB
IL7R
TSPAN5
ZFYVE1
SPATC1L
TLL2
CCL2
MSL2
RNF43
CTBP2
RAB23
SRP68
NEDD9
ZNF140
SLC10A2
TPCN2
RNF213
TCHP
FOXN3
OCSTAMP