ChIP-Atlas: Target genes

Potential target genes for SOX2

Query protein: SOX2
Distance from TSS: ± 1 kb  ± 5 kb  ± 10 kb
Sort key: SRX512370 | iPS cells
 
Color legends
  1000 750 500 250 1 0  (Values = Binding scores of MACS2 and STRING)

Download: TSV (text)
Links: Movie and Document for ChIP-Atlas Target Genes
SOX2's Target genes

◢ SOX2: Average

◢ SRX130061: BJ

◢ SRX10407083: Esophageal squamous carcinoma cell line

◢ SRX10407084: Esophageal squamous carcinoma cell line

◢ SRX5286338: ES cells

◢ SRX5286339: ES cells

◢ SRX5286342: ES cells

◢ SRX5286343: ES cells

◢ SRX11904439: H29

◢ SRX11904440: H29

◢ SRX6852812: HCC2814

◢ SRX277137: HCC95

◢ SRX6852810: HCC95

◢ SRX3205373: Head and neck squamous cell carcinoma 

◢ SRX702105: hESC derived mesendodermal cells

◢ SRX702106: hESC derived mesendodermal cells

◢ SRX702108: hESC derived mesendodermal cells

◢ SRX1047416: hESC derived neural cells

◢ SRX11919277: hESC derived neuromesodermal cells

◢ SRX011616: hESC H1

◢ SRX1047413: hESC H9

◢ SRX277140: hESC H9

◢ SRX6101128: hESC H9

◢ SRX6101129: hESC H9

◢ SRX266860: hESC HUES64

◢ SRX266861: hESC HUES64

◢ SRX702107: hESC HUES64

◢ SRX702109: hESC HUES64

◢ SRX20532164: hESC HUES8

◢ SRX20532165: hESC HUES8

◢ SRX5286340: hESC WIBR2

◢ SRX5286341: hESC WIBR2

◢ SRX5286344: hESC WIBR2

◢ SRX10101684: hESC WIBR3

◢ SRX10101685: hESC WIBR3

◢ SRX8026053: hESC WIBR3

◢ SRX8026055: hESC WIBR3

◢ SRX968908: iPSC derived neural cells

◢ SRX968909: iPSC derived neural cells

◢ SRX968910: iPSC derived neural cells

◢ SRX968911: iPSC derived neural cells

◢ SRX968912: iPSC derived neural cells

◢ SRX1813586: iPS cells

◢ SRX1813587: iPS cells

◢ SRX20140858: iPS cells

◢ SRX20140859: iPS cells

◣ SRX512370: iPS cells

◢ SRX6852811: KNS-62

◢ SRX10035162: KYSE-140

◢ SRX10407085: KYSE-70

◢ SRX277131: KYSE-70

◢ SRX6852808: LK-2

◢ SRX6852813: LK-2

◢ SRX6852814: LK-2

◢ SRX026880: LN-229

◢ SRX359955: LoVo

◢ ERX2260038: Lung cancer

◢ ERX2260040: Lung cancer

◢ ERX2260044: Lung cancer

◢ ERX2260046: Lung cancer

◢ SRX2731713: Lung cancer cell line

◢ SRX6750797: MDA-MB-231

◢ SRX6750798: MDA-MB-231

◢ SRX1813580: MRC-5

◢ SRX1813581: MRC-5

◢ SRX1813582: MRC-5

◢ SRX1813583: MRC-5

◢ SRX1813584: MRC-5

◢ SRX1813585: MRC-5

◢ SRX2732210: MRC-5

◢ SRX2732211: MRC-5

◢ SRX5771664: N2102Ep

◢ SRX5771666: N2102Ep

◢ SRX5771668: N2102Ep

◢ SRX11904443: NCI-H1836

◢ SRX11904444: NCI-H1836

◢ SRX6852809: NCI-H520

◢ SRX11904441: NCI-H82

◢ SRX11904442: NCI-H82

◢ SRX10445285: Neural crest cells

◢ SRX10445293: Neural crest cells

◢ SRX10445303: Neural crest cells

◢ SRX10445312: Neural crest cells

◢ SRX20140860: Neural progenitor cells

◢ SRX20140861: Neural progenitor cells

◢ SRX20140862: Neural progenitor cells

◢ SRX20140890: Neural progenitor cells

◢ SRX20140891: Neural progenitor cells

◢ SRX20140892: Neural progenitor cells

◢ SRX5716451: Neural progenitor cells

◢ SRX5716452: Neural progenitor cells

◢ SRX5716453: Neural progenitor cells

◢ SRX330107: ReN-VM

◢ SRX330108: ReN-VM

◢ SRX277134: T.T

◢ SRX3367070: TE-5

◢ SOX2: STRING

NES
CDX2
BCOR
SOX6
FGF1
PIPOX
MTF2
PF4
PPBP
SMARCA2
SACS
MUC1
NAV2
ANKRD1
SRRM4
GDF11
CD99L2
SOX2
LZTS1
DNMBP
LFNG
SPATA45
NFE2L3
UTF1
DUSP6
IER5L
NRARP
NTRK2
APOBEC3D
APOBEC3C
ARHGEF38
ID3
TGIF2-RAB5IF
TGIF2
ETS1
NDUFB5
MRPL47
ZNF532
RMND5B
NANOG
CLDN9
HMGB1
OBI1
FAM227A
CBY1
PRICKLE1
GOLGA6D
FLAD1
TFE3
MRPL20
REST
SLTM
FBXO40
CARHSP1
AHCYL2
POU5F1
GOLGA6A
FBP1
FOXD1
NADK
RPH3A
DPPA5
GSAP
RAB17
KCNJ1
KIFBP
GNAI2
TMPRSS11E
CAPZB
PSMD9
HPD
GPRC5B
SAMHD1
METTL11B
CNMD
CACHD1
TCF7L1
SNRPN
DDX17
NCDN
KIAA0319L
AGO1
CNPY1
SGMS2
VCAN
PRAC2
PRAC1
SCGB3A2
EDDM3B
USP44
MRS2
NRG1
ZCCHC3
TFAP2A
MED25
FUZ
TALDO1
CHFR
DOK7
FAM180A
MDN1
ESX1
SIX3
GOLGA6C
ZNF398
SHCBP1L
OLFML3
POSTN
GJA1
MAD2L2
DRAXIN
HES3
ICMT
DDX43
FGD4
HESX1
SFRP2
SLC2A14
LINGO1
PARP1
C9orf135
AFF1
AASS
UBD
BRINP2
GOLGA6B
HDAC9
VOPP1
DEFB114
DEFB113
TLE1
SLC7A5
TDGF1
PLPP2
TMEM47
PPP2R3A
DCAF4L1
LRRTM3
HOXD13
HOXD12
GIMAP5
GET3
PHC1
OR5AR1
ETV4
PGBD5
SHISA5
RASGRF2
DHDDS
LMCD1
GADD45G
SNURF
DAGLB
PDCL
ZNF536
DUSP29
MAGEB2
DIDO1
ZNF343
SLFN12
TNRC6A
ZNF483
DPH6
FAM120B
DLL1
IFRD1
ARHGAP21
LIPK
ST18
HOXB1
LRRN1
SALL3
TRIM24
PDPN
PMEPA1
CACNA2D1
MYSM1
ZFC3H1
THAP2
RARG
LRRTM4
LEFTY1
SOCS3
BTG2
PTMA
OR5F1
RFX4
FAM222B
ALDH1A2
AASDH
AJAP1
FRAT2
RNASE9
SMIM14
SUCO
FNDC11
BFAR
ARHGAP42
PRPS1
SLC35A5
ATG3
SORBS2
GAD2
TIMP4
TRIML2
DDX3X
CYP2S1
RASA1
PITX2
WDHD1
SOCS4
ATXN3
ZFHX3
CCDC169-SOHLH2
CCDC169
SCAF4
FBXL19
FGF2
XK
ZSCAN2
GRK6
L1TD1
USP7
NOTCH1
WDR49
MOG
ZNF202
PYGM
ZNF781
SMAD3
PILRA
CER1
FIGNL2
UGT1A3
PXMP4
AEBP2
PLEKHG5
NR6A1
OSTM1
FGFR2
SOX5
RPL23A
RAB34
CDH10
CHMP7
ZNF484
PACSIN2
ZNF428
EXOC7
WNT5B
MTHFD1L
ESRP1
MFSD4B
DUSP8
ONECUT2
GCNT2
GPSM3
PCBP1
TOMM40
CHD6
DLX5
ZSWIM3
ACOT8
ZNF304
HOXD1
HES5
PANK4
SLC46A1
FZD8
FOXB1
TUBB
MDC1
PHF5A
ACO2
ATP6V1G1
SOX14
KCNN2
GLIPR2
SLAMF1
MECOM
HMOX1
HGS
ARL16
TRIM13
LIN28B
SFXN1
CDKL5
ZFP3
TCAF1
KLRC1
HEY2
CD200
RTN4
IL34
PLAGL1
NDUFV1
TJP2
MMACHC
CCDC163
FAM153B
DMRT1
CSF2RB
CELSR3
FBXW11
FAM20A
TRAPPC8
TCF7L2
ZNF677
VN1R2
PLPP3
KDM2B
GRHL2
MBNL2
RAX
GALNT3
MUC3A
IQCH
AAGAB
NXPH2
RPSA
EBF3
C20orf96
ARID2
PALM2AKAP2
KXD1
CHCHD3
PDHA2
RGS3
SYN3
FZD5
ZNF875
RTBDN
MAST1
PDZK1IP1
FERMT1
KRT13
PTAR1
SNAPC3
TPST2
GRID2
SLC10A2
GTF2I
EPHB3
LITAF
FZR1
TP53
ANKRD40
SLC39A8
DUSP12
ARSD
HECW1
TRIM2
SOAT1
ACSL6
PRDM14
MACROH2A1
CAPN3
MED12
CCDC88C
TRIB2
NMNAT3
SLC25A36
AKR1D1
TBC1D16
ARHGEF19
ZNF565
ARF4
FGD3
HBG2
DDX59
PTCH1
CD24
TSGA10IP
GCSAM
MTRNR2L1
TIAL1
GABRQ
C1R
TUT1
MSC
GDF3
GSPT2
ARID5A
MTRNR2L8
ZSCAN10
TMUB2
TAL1
TSNAXIP1
RANBP10
SRPK1
ZNF101
ATP13A1
GABRB3
CCDC85A
CELF4
ZNF296
GEMIN7
ESR1
ASMTL
IL1RAPL1
RPL8
ZNF517
NOXRED1
HSBP1L1
MAPK8IP3
STOX2
NFE2
ACADM
SMIM6
LONRF3
NCOA7
SAMD5
TRIM38
DCAF4L2
FAT1
HSPA13
VMO1
GLTPD2
ENOX2
GLB1L3
FAM200B
EXOC5
AP5M1
DHX32
LRAT
WDR44
PSIP1
LRRC47
BBC3
RIIAD1
CELF3
MTM1
USP53
ZSCAN9
TRMT2A
RANBP1
UBQLN4
LAMTOR2
MEIS2
ISL1
PUF60
TMEM87A
GANC
MSI2
GOLGB1
FILIP1L
C7orf57
SMCO1
PDGFA
CTBS
SRSF7
ZNF600
HLA-A
NEPRO
PRUNE2
THEM4
SCD5
KMT2B
RAB30
BEND3
NFIB
LRGUK
F11
NUDT4B
UBOX5
FASTKD5
TTYH1
SLC16A13
LIMCH1
PRODH
LOC102724788
CAPRIN1
PEAK1
HMG20A
RIPK4
AMN1
ADAMTS16
PCDHB5
PRDM16
TMC5
NOSTRIN
EIF1AX
CDX4
PTPRN
GID4
ATPAF2
ANK2
BORCS6
CYTH2
C10orf95
ZNF814
ZDHHC1
HS6ST1
ZNF649
CTSF
NTN1
PLAAT4
ZNF608
ST6GAL1
CCDC124
OR6C76
QSER1
CAPN1
SLC24A2
RIF1
SPIC
ANAPC15
PPP1R16B
ABCB5
SFPQ
PHOX2B
CYP1A1
TRAK2
STRADB
ALPP
ZNF518B
UQCRC1
SULT6B1
CEBPZOS
JPT1
SRCIN1
ERBB2
PGAP3
PTPN2
SAPCD2
UAP1L1
CDH11
SPRY4
CDC14B
NKX1-2
NPAS3
RBFOX2
WFDC1
SNX19
PDIA4
ETV6
FEM1A
IP6K2
EPHB6
PREX2
SLC33A1
NDUFAB1
VPS37B
CFAP20
DACT3
FAM110D
C1orf127
MTHFD1
FOXN3
STK32C
LRRC27
CDK17
TNFRSF11A
PNCK
SLC6A8
BHLHE22
PRKAG2
SACM1L
IL22RA2
JMJD1C
NR2F2
NRXN1
EXOSC9
GUCA1A
ZBTB8OS
RBBP4
RPA2
EXT1
PAN2
IL23A
CLCF1
FAM24B
APC2
TRPC4AP
EPHA4
ZNF436
HOXA1
GADD45A
SKIDA1
MLLT10
HECTD4
JADE1
MSANTD4
DPYSL3
ARID1B
CDH9
AIG1
PIN4
INO80D
CDK6
ZBTB39
KLF3
GLDC
STRA6
SASH1
E2F7
TBL1XR1
TOX3
TEAD4
PBX1
BMP2
CACNB2
ZBTB45
PSME2
EMC9
LEKR1
SDHD
LCA5
TKT
ARSL
AKIRIN1
ZIC4
C8orf58
ID1
SLC24A3
ACVR1
KIF3C
NKX2-8
SLC3A2
SVOPL
SCRG1
KIAA0895L
CDX1
ADGRG7
ZIC2
LCP2
SPRED1
CEP41
DPPA2
SP8
ARIH1
FOXP1
RMND1
ARMT1
YAF2
PHACTR2
DUX4
WNK3
CCL2
VCPKMT
TNC
DDX49
COPE
NECTIN1
DPPA4
POLR3G
MBLAC2
ZNF664-RFLNA
ZNF664
CCDC92
WDR36
IFI16
SHKBP1
LRIG1
NEUROG3
PELI1
SEPHS1
HES6
PRR15
AKIRIN2
TSPAN5
PLA2G1B
ETV1
CDC25A
LEFTY2
MCCC1
GCLC
CLCC1
CRYL1
PSMB7
ZNF729
RGCC
UNK
H3-3B
ARAP3
ABCC2
TTBK1
PNRC1
MAP6
GATA3
TBL1X
FERD3L
SDCCAG8
CEP170
RHBDD2
SGMS1
SLC2A12
WDR33
CD4
GBP6
KCNIP4
CHN2
G3BP1
SALL4
EP300
CPVL
ZNF738
RAD54B
FSBP
MEIG1
ZNF85
HMGN1
FGF4
RAD23B
SDCBP
SCOC
ZNF469
CTH
MAPKAPK2
TSKS
AP2A1
TNFSF8
VANGL2
IGFBP3
SEC14L1
PTPN12
DTX2
UNC13B
AHNAK
ZNF775
ZNF763
PLAC8
MFSD6
EMSY
RASSF8
UXS1
PRCC
KNTC1
ZCCHC12
ITM2B
HOXA11
TESK2
HHIP
PAXBP1
RPUSD4
FAM118B
PQBP1
TIMM17B
C1orf167
GRIA4
ZNF749
ZBTB40
GJA10
OLAH
GRIN3A
CCDC174
CSRNP2
SLCO5A1
WASF1
CDC40
QPRT
TLL1
LHFPL4
SPHK2
RPL18
CLDN23
ZNF3
STEAP3
MVB12A
LARP1
TFAP2D
SP9
TASOR
ACSL1
CDC42EP4
MTA2
A2ML1
RCN1
ZNF589
CSGALNACT1
PAG1
FOXO4
ISL2
EGR3
SCNN1A
LTBR
ADGRA1
AMOTL2
PLA2G3
PER2
KDM2A
BIN2
PES1
TCN2
THBS2
MAPK10
HIP1
MEA1
KLHDC3
MAGEB17
MED4
GALNT8
SLN
RAB5C
HOXB2
CTIF
CXADR
DENR
KLF6
DPP3
INKA2
DDX20
RAB5A
EFHB
FOXB2
UBAP2
DENND2A
SLFN12L
DST
PWWP3A
TRH
OAZ2
TBC1D17
AKT1S1
TDRP
APELA
L3MBTL2
MRPS30
OLIG3
NDUFB4
RNF144A
CCN2
ROR1
RAB15
RTN2
PPM1N
CASP7
EPB41L1
FAM98A
TMEM70
ELOC
TGIF1
RAB36
RSPH14
PPP1R15A
PLEKHA4
ADCK1
EIF3F
INSYN2B
NEBL
S100A16
C22orf39
WLS
YEATS2
TFAP2C
STX18
SPATA22
INTS9
HMBOX1
GLRB
FGR
ZSWIM6
HSP90AB1
OGA
ARSG
DLG2
CA2
EID3
OR51H1
TES
ZNF195
SDHC
CHMP4B
NKAIN4
GXYLT2
CHD8
N4BP2L2
NEUROG1
AUH
PCDH18
ADD2
LAMP5
FANCL
FAM47E
FAM47E-STBD1
ADA2
DCLK1
WBP1L
ADAR
RABGAP1L
SHROOM3
SLC22A23
RPL9
LIAS
YLPM1
SPATA12
SPAG4
SLC7A7
ARX
STX16
SMPDL3B
H2AZ2
RPRM
ST6GAL2
LYPD6B
KDM3A
BCL9
TLE3
TRIM22
TRIM5
CCDC172
AIFM1
PLIN2
VPS50
HEPACAM2
KLF5
RBMX
RAB4B
MIA
GUCA1ANB
IL17RD
EMD
XAB2
PCP2
HRG
ZIC5
TRAPPC3
MAP7D1
DPYSL2
BDH1
NOG
CNGA1
NIPAL1
CTNND2
PIF1
RPL27
TTLL6
GPM6B
KIF26A
PTPRF
STK3
OSR2
DHRS3
PYDC5
RAPGEF2
SMCHD1
ARMC3
VIPAS39
AHSA1
NDUFA2
IK
ESRRA
CATSPERZ
SET
OXA1L
ZNF665
TCHP
GDPD2
TCTN3
ZNF630
BTG1
OSGEP
APEX1
CITED1
NPSR1
OAT
PTX3
CDH4
PRLHR
CLDN19
MTRNR2L2
MSH3
DHFR
NDUFS5
THRB
SKIL
KLHL13
PAX2
NRG3
KLHL5
ZCCHC8
GNAS
MAGEB3
LRRC6
ACCS
ATAT1
SALL2
SFRP1
P2RX6
FZD2
IFIT3
TRPM3
RNF186
BAMBI
BCL11A
TSPAN14
SNX27
CDC42EP3
ESR2
VEZT
FGD6
RNF19A
OXNAD1
DPH3
ING4
NOCT
DIAPH3
ID2
TSSK4
WDFY2