ChIP-Atlas: Target genes

Potential target genes for SOX2

Query protein: SOX2
Distance from TSS: ± 1 kb  ± 5 kb  ± 10 kb
Sort key: SRX10407083 | Esophageal squamous carcinoma cell line
 
Color legends
  1000 750 500 250 1 0  (Values = Binding scores of MACS2 and STRING)

Download: TSV (text)
Links: Movie and Document for ChIP-Atlas Target Genes
SOX2's Target genes

◢ SOX2: Average

◢ SRX130061: BJ

◣ SRX10407083: Esophageal squamous carcinoma cell line

◢ SRX10407084: Esophageal squamous carcinoma cell line

◢ SRX5286338: ES cells

◢ SRX5286339: ES cells

◢ SRX5286342: ES cells

◢ SRX5286343: ES cells

◢ SRX11904439: H29

◢ SRX11904440: H29

◢ SRX6852812: HCC2814

◢ SRX277137: HCC95

◢ SRX6852810: HCC95

◢ SRX3205373: Head and neck squamous cell carcinoma 

◢ SRX702105: hESC derived mesendodermal cells

◢ SRX702106: hESC derived mesendodermal cells

◢ SRX702108: hESC derived mesendodermal cells

◢ SRX1047416: hESC derived neural cells

◢ SRX11919277: hESC derived neuromesodermal cells

◢ SRX011616: hESC H1

◢ SRX1047413: hESC H9

◢ SRX277140: hESC H9

◢ SRX6101128: hESC H9

◢ SRX6101129: hESC H9

◢ SRX266860: hESC HUES64

◢ SRX266861: hESC HUES64

◢ SRX702107: hESC HUES64

◢ SRX702109: hESC HUES64

◢ SRX20532164: hESC HUES8

◢ SRX20532165: hESC HUES8

◢ SRX5286340: hESC WIBR2

◢ SRX5286341: hESC WIBR2

◢ SRX5286344: hESC WIBR2

◢ SRX10101684: hESC WIBR3

◢ SRX10101685: hESC WIBR3

◢ SRX8026053: hESC WIBR3

◢ SRX8026055: hESC WIBR3

◢ SRX968908: iPSC derived neural cells

◢ SRX968909: iPSC derived neural cells

◢ SRX968910: iPSC derived neural cells

◢ SRX968911: iPSC derived neural cells

◢ SRX968912: iPSC derived neural cells

◢ SRX1813586: iPS cells

◢ SRX1813587: iPS cells

◢ SRX20140858: iPS cells

◢ SRX20140859: iPS cells

◢ SRX512370: iPS cells

◢ SRX6852811: KNS-62

◢ SRX10035162: KYSE-140

◢ SRX10407085: KYSE-70

◢ SRX277131: KYSE-70

◢ SRX6852808: LK-2

◢ SRX6852813: LK-2

◢ SRX6852814: LK-2

◢ SRX026880: LN-229

◢ SRX359955: LoVo

◢ ERX2260038: Lung cancer

◢ ERX2260040: Lung cancer

◢ ERX2260044: Lung cancer

◢ ERX2260046: Lung cancer

◢ SRX2731713: Lung cancer cell line

◢ SRX6750797: MDA-MB-231

◢ SRX6750798: MDA-MB-231

◢ SRX1813580: MRC-5

◢ SRX1813581: MRC-5

◢ SRX1813582: MRC-5

◢ SRX1813583: MRC-5

◢ SRX1813584: MRC-5

◢ SRX1813585: MRC-5

◢ SRX2732210: MRC-5

◢ SRX2732211: MRC-5

◢ SRX5771664: N2102Ep

◢ SRX5771666: N2102Ep

◢ SRX5771668: N2102Ep

◢ SRX11904443: NCI-H1836

◢ SRX11904444: NCI-H1836

◢ SRX6852809: NCI-H520

◢ SRX11904441: NCI-H82

◢ SRX11904442: NCI-H82

◢ SRX10445285: Neural crest cells

◢ SRX10445293: Neural crest cells

◢ SRX10445303: Neural crest cells

◢ SRX10445312: Neural crest cells

◢ SRX20140860: Neural progenitor cells

◢ SRX20140861: Neural progenitor cells

◢ SRX20140862: Neural progenitor cells

◢ SRX20140890: Neural progenitor cells

◢ SRX20140891: Neural progenitor cells

◢ SRX20140892: Neural progenitor cells

◢ SRX5716451: Neural progenitor cells

◢ SRX5716452: Neural progenitor cells

◢ SRX5716453: Neural progenitor cells

◢ SRX330107: ReN-VM

◢ SRX330108: ReN-VM

◢ SRX277134: T.T

◢ SRX3367070: TE-5

◢ SOX2: STRING

NRARP
PYCR2
TGIF1
NAV2
MYEOV
SMIM3
SINHCAF
NDUFB5
MRPL47
MTF2
MED25
FUZ
FAM227A
CBY1
CDC42EP3
PTMA
CAPNS2
LFNG
PLPP2
CLCF1
HMGB1
FHL2
RFLNA
FBXL19
NOTCH1
ZSCAN2
VWCE
TMEM200C
OR7A10
CDH13
MAP3K2
NEUROD1
NDST1
IQCH
AAGAB
DST
SRI
PTPRH
PHLDB2
VAMP5
GLI2
PUS10
PEX13
KMT2B
ERGIC2
HNF4A
STK31
CUEDC1
CYP1A1
LYPD1
PTGFRN
ABCC1
ARHGAP5
MBLAC1
CEP63
ANAPC13
ABCC2
DNM1L
CASQ2
F11R
MYL12A
VOPP1
CELA3B
TRPV4
MAST4
CLOCK
LRRC25
DDX17
GPR39
CPNE2
ID3
MAP3K20
WDFY2
PHACTR2
H4C15
H4C14
CHD6
SHISA7
HGS
ARL16
SYBU
TMEM107
DPP3
ABLIM1
GRK6
LIMK2
IRAG2
RALGDS
ITPRIP
CBLC
FGD3
KRT6A
MUC1
PLA2G6
IL1F10
PER2
MS4A2
HAO2
TMEM205
CCDC159
RAB3D
NEBL
CNP
DENR
MUS81
CFL1
OGA
ISL2
SPRY4
LYRM1
DCUN1D3
MBP
MCM7
AP4M1
FGF19
AGPS
GREB1
IFRD1
CPT1A
FAM220A
ST8SIA1
PHF5A
ACO2
TMEM88B
ANKRD65
FRY
SPTSSA
OPHN1
ARIH1
CA6
SLC33A1
RGS2
ZNF57
RHOBTB2
HIPK1
HES1
VIT
MCCC1
VAPA
FAM50B
HSD17B3
SYT2
DOCK5
ZFC3H1
THAP2
KRT15
PSME3IP1
RSPRY1
NDUFS5
TNFRSF21
RNF13
NDE1
MARF1
SPHK1
ITGB1
NSA2
GFM2
LOC105370980
CCDC88A
HERPUD2
AMN1
BCAS1
MEF2C
KIAA0040
ST6GALNAC2
PIF1
JMJD7-PLA2G4B
JMJD7
OIT3
DAPP1
SLC7A5
RBFOX2
ZNF428
DCLRE1B
AP4B1
PRR15
ALDH7A1
MTRNR2L8
OGT
UNK
H3-3B
CYP2S1
SLC12A7
DNAH5
DCTN1
FOXJ3
TAGAP
SMCO1
NTMT1
ARNTL2
G3BP1
PKP2
TPRKB
TMCC1
SPATS2L
MRPL21
IGHMBP2
FURIN
SLC25A11
RNF167
ZNF37A
ACP3
RTBDN
MAST1
CCL26
PTPRM
EIF2AK4
TINAGL1
TNFAIP8
MELTF
DNASE1L2
TLX3
IPO4
MTRNR2L1
NRCAM
PTCHD4
MT1B
TMEM154
EFHC1
AHCY
CDK12
EGFR
HDAC9
FZR1
FAM107B
HID1
XCR1
CLDN17
VASH2
NPIPB12
MYL12B
OLFML2A
WBP11
C12orf60
SPINT1
COPS7A
LECT2
CAPRIN1
TJP2
ZNF710
PTHLH
CFAP54
MAP3K9
EVA1A
BCL9
TSNAXIP1
RANBP10
FZD1
DENND4A
PRKAB2
OARD1
NFYA
ELFN2
SUFU
ACTR1A
LAMP1
NPIPA3
NPIPA2
LOC100509620
ECT2
COA6
AHNAK2
NR1D1
CCDC192
GET3
KDM2A
RASA3
ARPC1A
ESRP1
IFT80
SMC4
GDF5
CEP250
NIBAN2
KDM3A
FAM83G
IL23R
RAB5C
PIK3C2G
SIX2
SLC20A2
NCBP2AS2
NCBP2
AKAP9
HNRNPC
SLC25A45
FRMD8
OLFML3
OAZ2
TSPAN14
TOMM40L
APOA2
SVIL
N4BP1
CTNNAL1
JUP
SLC39A12
TIA1
SLX4IP
MKKS
KLRK1
NUP160
SLC16A13
SPATA12
CNIH4
RAPGEFL1
TMUB2
KNTC1
ADGRG1
CDCP2
NDUFS2
ADAMTS4
PRUNE2
TBC1D17
AKT1S1
ANKRD36C
MTHFD1L
TTF2
ATXN1
PSME2
EMC9
HNRNPDL
ENOPH1
TFB1M
RPS6KB2
ITGBL1
SH3GL3
RBBP8NL
CDHR2
ZNF608
FIGNL1
AADAC
CLSPN
PDIA4
KPNA4
ZSCAN9
ABCC10
KLHL24
MTMR1
ANO1
ADGRF4
FLNB
CD2BP2
POLDIP3
SLC22A23
VGF
SLC4A7
SPRED2
EXPH5
APOBEC3B
SMAD3
MTUS1
G3BP2
C2CD5
POLG
ZNF195
ACSL1
EIF1AD
BANF1
NFIB
CFAP20
KRTAP3-1
MAP4
PLEKHG1
SOX6
C11orf58
LMNTD1
CYTH2
BORCS6
BCAS2
ETV4
FOXP1
OTUB2
MOB3C
ADH5
STAMBP
SPAG4
ZNF785
SIPA1L1
ING4
LGALS8
CSF2RA
ZBTB6
METRN
IL4R
MMP10
NCOA4
GNAL
H4C12
CTXN3
LDHB
PKM
SPAG9
CSDE1
PRDM10
SOX9
ETV1
CCDC33
MICAL2
NEK10
RIN1
PACSIN2
SUN1
CCDC30
HMGCS1
SPINK1
ASB5
SAPCD2
DHX8
YLPM1
UAP1L1
VRK2
ENSA
CDCA4
FAM83B
PSMD3
INPP4B
DGKZ
SHF
WDR36
EP300
PHAX
POLR2E
NUTM2F
GPX4
RNF43
SFPQ
MAN1A2
SNAP23
ZNF106
LTBP2
GUCA1B
IRF2BP2
TBX4
TMCO3
DCUN1D2
DVL3
SIRT4
INTS9
HMBOX1
UBR2
KSR1
KLK6
MSANTD4
ZCCHC14
RIPOR3
LNX1
ETV5
CTSV
H2AJ
YARS2
SH3RF3
NDUFS8
ASCC2
DMRT2
TUBB8
SCNN1A
LTBR
EIF3E
CNKSR1
TBC1D31
SDCCAG8
CEP170
FJX1
LRRC23
PPP1R3G
MTRNR2L2
MSH3
DHFR
TOMM40
H4C9
GBA
IL31RA
FGF1
ARSG
NFE2L2
ATG2A
NCEH1
ATP1A1
SESTD1
KRT33A
WBP1L
WDR33
RPL27
SLC25A25
ZNF268
PCCA
SFR1
HSPA13
SART1
SIGLEC15
ST6GALNAC4
CWC22
GPR150
DIABLO
PGM2L1
STON1-GTF2A1L
STON1
NPIPB6
GPR68
WFDC3
DNTTIP1
PTCRA
MIA3
LOC100505841
UFD1
CDC45
BAHCC1
SMO
ANKRD36
LMNA
BCL9L
CCDC146
NUDT19
COMMD2
GPR87
TCTEX1D2
HSPH1
AP2B1
UQCRQ
GDF9
NPB
ARHGEF1
PHB2
SRP54
CTTN
VWA5B2
CNKSR3
ANXA2
OR10S1
NPDC1
NFKBIA
TRIP4
C1QTNF7
ZCCHC8
TUT1
C12orf71
EPHB3
PRORP
PPP2R3C
CLDN16
CCT2
PIK3R3
KIAA0895L
ATAD2
MAP3K7
ANKRD13D
MYO6
TLE3
DNAJB1
TECR
SLC25A32
DCAF13
C19orf33
PARP2
ZFX
LOC105372977
UPP1
TENM2
TMEM221
EGR3
HEXIM2
YWHAG
PRMT5
OSCP1
MTMR11
CLCN3
GGT1
MAP2K1
MIOS
GSN
KCNJ15
KBTBD6
H2BC8
H2AC8
SOST
MRPS23
DAD1
TIMM10
GOLGB1
DDX5
NDUFS7
EMP1
SRSF6
RFFL
GLI3
PUS7L
IRAK4
TRDMT1
PLD1
ASB2
MAGT1
COX7B
TTC6
FOXA1
SMPD3
EPB41L4B
COX8A
CAPS
PLK3
BAZ1B
ARSD
MTA3
KCNG3
C11orf65
ABCC3
ALOX5AP
SNRNP35
H4C3
H1-6
PTPN6
C12orf57
PTPN3
NKIRAS1
NR1D2
TSKS
AP2A1
CREBL2
SMARCA2
REST
CDX2
SOX2
NES
TMPRSS11E
SACS
DPPA5
PIPOX
ARHGEF38
DUX4
METTL11B
DNMBP
ZNF483
FRG2C
CACHD1
AGO1
DUSP6
TCF7L1
NRG1
RMND5B
ANKRD1
LRRN1
CD99L2
GOLGA6D
SFRP2
SOCS3
NTRK2
GIMAP5
FAM222B
SPATA45
PF4
GDF11
PPBP
PHC1
SRRM4
SHCBP1L
BCOR
PRICKLE1
LMCD1
SNRPN
MFSD4B
FRG2
RPH3A
OBI1
SAMHD1
BTG2
OR5AR1
CLDN9
EDDM3B
POU5F1
GAD2
SLTM
FLAD1
ZSWIM3
ACOT8
APOBEC3F
FBXW11
DNMT3B
ARID2
TALDO1
ZFHX3
TDGF1
MED12
HESX1
SHISA5
RIIAD1
ZNF775
RASGRF2
ETS1
VENTX
ZNF398
MRPL20
PMEPA1
NADK
NFE2L3
UTF1
SCGB3A2
PSMD9
HPD
VCAN
DDX43
NANOG
CELF3
GOLGA6B
WFDC8
ZNF343
NCDN
KIAA0319L
COL23A1
TRAPPC8
GOLGA6A
FGD4
LEFTY2
LZTS1
RCN1
FGFR2
CER1
GADD45G
USP44
DAGLB
IER5L
CELF4
CNPY1
TRIM24
FAM120B
MYSM1
HES3
FIGNL2
FGF2
FZD8
LIN28B
GPRC5B
FBP1
PPP1R16B
ICMT
GPSM3
GNAI2
PARP1
SNURF
GOLGA6C
IL34
SOX5
RIF1
SLA2
KIFBP
PLAGL1
LEFTY1
MRS2
FRAT2
SGMS2
SAMD5
BFSP1
GXYLT2
FBXO40
PRDM14
PALM2AKAP2
FZD2
TRIM2
MACROH2A1
RASA1
SNAPC3
HOXD13
HOXD12
CCDC169-SOHLH2
CCDC169
DHDDS
DND1
LRRTM3
WNT5B
SLC35A5
ATG3
LIPK
ZNF532
CRYGB
JPT1
PDPN
MDN1
LIMCH1
LINGO1
GJA1
SCAF4
TRIML2
ECE1
CEP41
APOBEC3D
APOBEC3C
SLC2A14
TNRC18
MAD2L2
RFX4
PREX2
SOX14
SPIC
ST18
DHX32
PDCL
LOC100129484
POSTN
UNC13B
CDC14B
TUBB
MDC1
EEF1A1
CD24
DGLUCY
BEND3
PCBP1
CHFR
PIN4
FAM180A
DCAF4L1
AASS
ZNF436
HMOX1
TGIF2-RAB5IF
TGIF2
TMC5
ONECUT2
SALL3
GDF3
ALDH1A2
MTM1
DRAXIN
DDR1
ZNF335
ITGB5
DLL1
TES
KCNN2
LRRTM4
PCLAF
L1TD1
TIMP4
FAM200B
ZSCAN10
FOXD1
SH3BP4
CARHSP1
DPH6
GABRQ
WDHD1
SOCS4
SRCIN1
SRSF7
RTN4
ADA2
HBG2
ZNF781
DDX3X
TBC1D16
CHN2
MOG
TIAM2
ITGB3
RGS3
ISOC2
CCDC130
PEAK1
HMG20A
PUF60
ZNF304
SORBS2
KDM2B
SENP2
MMACHC
CCDC163
SYN3
SLC39A8
PGPEP1
TTYH1
SASH1
PGK1
AK4
CACNA2D1
CAMTA1
TNC
EXT1
C8orf58
AHCYL2
USP7
DUSP12
GCNT2
ADAR
WDR49
C1orf127
SLC46A1
PTAR1
AEBP2
PNRC1
GTF2I
KCNJ1
AKIRIN2
LYPD6B
C10orf95
PXMP4
ACVR1
EMSY
DOK7
UGT1A6
C20orf96
ABCB5
GABRB3
SNX19
ZCCHC3
TNFSF8
TMEM47
NDUFV1
LRIG1
CAPN3
ZNF536
ANK2
FAM24B
ZNF296
GEMIN7
CCN2
PSIP1
ABL2
VANGL2
RASAL2
NECTIN1
TRIB2
LIN28A
FZD5
KLF3
PITPNM2
TPST2
TCF7L2
MYCL
REV3L
ESR2
TIAM1
TESK2
INSM1
AASDH
PDE1B
AUH
UBAP2
ZNF875
PRODH
LOC102724788
ZBTB45
OSBPL1A
DIDO1
HHIP
MARCKS
MVB12A
KRT8
GLDC
ZNF600
NDUFAB1
PRKAG2
SLC25A36
ZNF649
FOXO6
NPSR1
PPP2R3A
DPPA4
SLFN12
ATP6V1G1
ZNF664-RFLNA
ZNF664
CCDC92
RPL8
TRPC4AP
SLC3A2
ZNF565
NTN5
SMIM14
DISP3
SLC23A2
TFE3
MAGEB2
CDH10
TMEM43
DICER1
CHCHD4
PGBD5
NEUROG3
SUCO
TRPM1
PXDC1
CNOT11
CHMP7
KLF7
PRRC2B
H3C15
H3C14
H2AC19
H2AC18
LRAT
SOAT1
RNASE9
CDYL
TLE1
TFAP2A
TET3
ESX1
PYGB
BIN2
FAM20A
FAM153B