ChIP-Atlas: Target genes

Potential target genes for SOX2

Query protein: SOX2
Distance from TSS: ± 1 kb  ± 5 kb  ± 10 kb
Sort key: SRX20532165 | hESC HUES8
 
Color legends
  1000 750 500 250 1 0  (Values = Binding scores of MACS2 and STRING)

Download: TSV (text)
Links: Movie and Document for ChIP-Atlas Target Genes
SOX2's Target genes

◢ SOX2: Average

◢ SRX130061: BJ

◢ SRX10407083: Esophageal squamous carcinoma cell line

◢ SRX10407084: Esophageal squamous carcinoma cell line

◢ SRX5286338: ES cells

◢ SRX5286339: ES cells

◢ SRX5286342: ES cells

◢ SRX5286343: ES cells

◢ SRX11904439: H29

◢ SRX11904440: H29

◢ SRX6852812: HCC2814

◢ SRX277137: HCC95

◢ SRX6852810: HCC95

◢ SRX3205373: Head and neck squamous cell carcinoma 

◢ SRX702105: hESC derived mesendodermal cells

◢ SRX702106: hESC derived mesendodermal cells

◢ SRX702108: hESC derived mesendodermal cells

◢ SRX1047416: hESC derived neural cells

◢ SRX11919277: hESC derived neuromesodermal cells

◢ SRX011616: hESC H1

◢ SRX1047413: hESC H9

◢ SRX277140: hESC H9

◢ SRX6101128: hESC H9

◢ SRX6101129: hESC H9

◢ SRX266860: hESC HUES64

◢ SRX266861: hESC HUES64

◢ SRX702107: hESC HUES64

◢ SRX702109: hESC HUES64

◢ SRX20532164: hESC HUES8

◣ SRX20532165: hESC HUES8

◢ SRX5286340: hESC WIBR2

◢ SRX5286341: hESC WIBR2

◢ SRX5286344: hESC WIBR2

◢ SRX10101684: hESC WIBR3

◢ SRX10101685: hESC WIBR3

◢ SRX8026053: hESC WIBR3

◢ SRX8026055: hESC WIBR3

◢ SRX968908: iPSC derived neural cells

◢ SRX968909: iPSC derived neural cells

◢ SRX968910: iPSC derived neural cells

◢ SRX968911: iPSC derived neural cells

◢ SRX968912: iPSC derived neural cells

◢ SRX1813586: iPS cells

◢ SRX1813587: iPS cells

◢ SRX20140858: iPS cells

◢ SRX20140859: iPS cells

◢ SRX512370: iPS cells

◢ SRX6852811: KNS-62

◢ SRX10035162: KYSE-140

◢ SRX10407085: KYSE-70

◢ SRX277131: KYSE-70

◢ SRX6852808: LK-2

◢ SRX6852813: LK-2

◢ SRX6852814: LK-2

◢ SRX026880: LN-229

◢ SRX359955: LoVo

◢ ERX2260038: Lung cancer

◢ ERX2260040: Lung cancer

◢ ERX2260044: Lung cancer

◢ ERX2260046: Lung cancer

◢ SRX2731713: Lung cancer cell line

◢ SRX6750797: MDA-MB-231

◢ SRX6750798: MDA-MB-231

◢ SRX1813580: MRC-5

◢ SRX1813581: MRC-5

◢ SRX1813582: MRC-5

◢ SRX1813583: MRC-5

◢ SRX1813584: MRC-5

◢ SRX1813585: MRC-5

◢ SRX2732210: MRC-5

◢ SRX2732211: MRC-5

◢ SRX5771664: N2102Ep

◢ SRX5771666: N2102Ep

◢ SRX5771668: N2102Ep

◢ SRX11904443: NCI-H1836

◢ SRX11904444: NCI-H1836

◢ SRX6852809: NCI-H520

◢ SRX11904441: NCI-H82

◢ SRX11904442: NCI-H82

◢ SRX10445285: Neural crest cells

◢ SRX10445293: Neural crest cells

◢ SRX10445303: Neural crest cells

◢ SRX10445312: Neural crest cells

◢ SRX20140860: Neural progenitor cells

◢ SRX20140861: Neural progenitor cells

◢ SRX20140862: Neural progenitor cells

◢ SRX20140890: Neural progenitor cells

◢ SRX20140891: Neural progenitor cells

◢ SRX20140892: Neural progenitor cells

◢ SRX5716451: Neural progenitor cells

◢ SRX5716452: Neural progenitor cells

◢ SRX5716453: Neural progenitor cells

◢ SRX330107: ReN-VM

◢ SRX330108: ReN-VM

◢ SRX277134: T.T

◢ SRX3367070: TE-5

◢ SOX2: STRING

NRARP
EEF1A1
GOLGA6D
PF4
PPBP
SOX2
SMARCA2
CDX2
TCF7L1
GOLGA6B
NES
SRRM4
ID3
FGF1
RMND5B
PIPOX
FRG2C
DNMBP
OBI1
FOXA2
DUSP6
GOLGA6A
ARHGEF38
DPPA5
GAD2
POU5F1
ANKRD1
LFNG
HMGB1
NANOG
PRICKLE1
MUC1
ZSCAN2
FAM227A
CBY1
ZNF483
GOLGA6C
ETS1
AGO1
FGF2
GPRC5B
PTMA
PHC1
SFRP2
MTF2
RPH3A
CDC14B
UTF1
SNRPN
TALDO1
TMPRSS11E
SOX6
NAV2
GIMAP5
FOXD1
CLDN9
SACS
SAMHD1
SCGB3A2
SGMS2
CACHD1
NADK
NFE2L3
APOBEC3D
APOBEC3C
DDX17
ZNF532
NTRK2
PCBP1
RIF1
TRIML2
IER5L
SPATA45
SACM1L
NCDN
KIAA0319L
ZSWIM3
ACOT8
EDDM3B
ZNF398
LEFTY1
REST
HDAC9
BCOR
SOX5
LRRN1
PLPP2
CHFR
C20orf96
FAM120B
DLL1
DUX4
SLC2A14
ZNF775
SHISA5
ISOC2
TLE1
DPPA4
SOCS3
FAT1
WNT5B
SLTM
DDX43
MYSM1
AHCYL2
TGIF2-RAB5IF
TGIF2
NDUFB5
MRPL47
FBXO40
CYTH2
CAPZB
AASS
CASP12
FAM180A
DPH6
LRIG1
PGK1
FRG2
GNAI2
METTL11B
PSMD9
HPD
TRIM13
CARHSP1
MDN1
SHCBP1L
CER1
ESRP1
CNPY1
POSTN
CDH10
SCAF4
ZFHX3
GTF2I
TMEFF1
TRIM24
MRS2
BTG2
GRK6
GADD45G
ZNF536
ZNF781
PARP1
L1TD1
KIFBP
AEBP2
FGFR2
GCNT2
CNMD
OR5F1
HESX1
RASGRF2
AKIRIN2
JMJD1C
LIPK
ZCCHC3
TNRC6A
AFF1
TFE3
SNURF
HGS
ARL16
LINGO1
TAL1
MFSD4B
FZR1
LIN28B
PCDHB5
AKR1D1
SAMD5
KCNN2
A2ML1
HES3
FBP1
ICMT
ZBTB45
GSAP
NOTCH1
FGD4
LZTS1
DEFB114
DEFB113
ZFC3H1
THAP2
FOXN3
TKT
SINHCAF
NRG1
CD99L2
GDF3
SP9
GLB1L3
MEIS2
RIIAD1
CELF3
ZNF202
ITGB5
FAM153B
MED25
FUZ
FAM24B
ETV4
MEX3D
PRDM14
PDGFA
CHMP7
CD24
SMCO1
KMT2B
SNAPC3
LRRTM3
MS4A4A
BEND3
AJAP1
DIDO1
TIAM2
ETV1
ESR1
SOX14
LRRTM4
E2F7
PRAC2
PRAC1
PMEPA1
CHCHD3
TES
DAGLB
PDCL
QSER1
ERBB2
PGAP3
EXOC7
RFX4
ADAMTS16
TCHP
LRRC47
CCDC169-SOHLH2
CCDC169
TUBB
MDC1
CELF4
ZNF304
TRAPPC8
TMC5
HOXD13
HOXD12
RASA1
TPST2
ZNF649
FAM222B
LIN28A
SP8
F11
TACC2
NEUROG3
LRGUK
PGBD5
PLPP3
TDGF1
USP44
MAD2L2
SLC25A36
LITAF
SYN3
RAD54B
FSBP
GJA1
FZD5
CMAS
IL34
ZIC5
FBXL19
UNK
H3-3B
PPP1R16B
HMOX1
PDE1B
GSTT2B
GSTT2
STOX2
UBQLN4
LAMTOR2
DMRT1
CDH9
HBG2
MOG
MARCKS
CYP2S1
VCAN
ANK2
FBXW11
DRAXIN
RNASE9
CCT2
TFAP2A
BRINP1
ARHGAP42
ZFAND6
SENP2
ARSD
SALL3
KNTC1
LEFTY2
GABRB3
SMIM14
PRR15
PBX1
ZNF140
GET3
VASH2
SLC39A8
ID1
IFI16
PPP2R3A
CTBS
FGD3
PREX2
ATOH1
GABRQ
CLCC1
FZD8
TSKS
AP2A1
C9orf135
DCAF4L1
SIX2
SMAD3
CRYBB1
SLC30A9
SUCO
DDX3X
GPSM3
SLFN12
TRPM1
HMGN1
HSPA13
LRFN3
GID4
ATPAF2
SEPHS1
ZNF608
TFAP2D
KDM2B
CFAP20
IL17RD
C1orf127
ZNF627
PER2
SLCO5A1
SKIDA1
MLLT10
C7orf57
PAK1
RAB17
MLLT6
ARID2
KCNJ1
CD200
GRIN3A
SASH1
RIPK4
SCD5
SRSF7
CAPN3
AASDH
CACNA2D1
BRINP2
FERMT1
PDP1
OLFML3
TRPC4AP
ZSCAN10
ARIH1
SLC46A1
AFAP1
LOC389199
SPRY4
SVOPL
UBD
FAM81B
BDH1
VGF
FOXP1
VSNL1
TCAF1
RPSA
RNF186
PILRA
KLRC1
WDHD1
SOCS4
SERPINA11
OR5AR1
PHF5A
ACO2
TBC1D16
CNOT11
THY1
TESK2
ARF4
S100A16
RNF213
CAPRIN1
ONECUT2
CXADR
EP300
CHD6
SRCIN1
ESX1
NECTIN1
ADD2
IGDCC3
ADA2
PDHA2
IP6K2
CYP1A1
USP7
RRBP1
USP53
PDIA4
DISP3
BORCS6
ARHGEF19
NUAK1
CEP41
PAG1
CSRNP2
ZNF428
CCDC88C
ITM2B
RARG
NR2F2
ITGB1
RTN4
NXPH2
IQCH
AAGAB
ARID5A
CTTNBP2NL
AK4
TRMT2A
RANBP1
KLF7
RPL27
RTBDN
MAST1
ESRRA
CATSPERZ
MRPL20
PDPN
INO80D
DTX2
HEBP2
KLKB1
HOXB1
TIAL1
TRAPPC3
MAP7D1
TRAK2
STRADB
HES6
PIN4
TSPAN5
GUCA1A
GATA3
CDK17
TRIM2
PRKAG2
MIDN
TJP2
POLR3G
MBLAC2
ASMTL
SLC16A13
CPT1A
ATAD2
LMCD1
WDFY2
DPPA2
FOS
HK2
ZNF506
EGR3
UBE2T
ERVH48-1
ADRM1
MUC3A
TSPAN14
ZNF195
MAGEB2
SPAG4
DUSP16
SIX3
ZNF484
TBC1D17
AKT1S1
C6orf132
CSF2RB
ZSWIM4
PLCH1
SYNDIG1L
SFRP1
FAM98A
MACROH2A1
DAAM1
SPRR2F
IFRD1
KLF3
TCF7L2
SLC10A2
ISL2
FOXJ2
VOPP1
ZBTB6
HEY2
FAM110D
SLX4IP
MKKS
FLAD1
LIMCH1
FOXO6
RBP1
DDR1
PNCK
SLC6A8
MUS81
CFL1
MDK
TRIB1
SLC24A3
SLC4A2
CDK5
ISL1
TMUB2
DUSP29
PTX3
ANO1
PXDC1
EXOSC9
ZNF296
GEMIN7
CCN2
KRT8
HECW1
TICRR
DHX32
HNRNPDL
ENOPH1
SULT6B1
CEBPZOS
POGLUT2
CAVIN3
HRG
TFAP2C
TSGA10IP
SET
LDB1
C11orf58
SLC2A4
ZNF518B
PSME2
EMC9
RNF31
BCL9
ST6GAL2
FRAT2
ZBTB8OS
RBBP4
PLCG1
TMEM43
CHCHD4
PRKCA
SH2D3C
AMOTL2
IFITM2
GJC1
OR7D2
UGT2B4
ALDH7A1
POLB
CELSR3
C1R
ZBTB37
TOMM40
STK32C
LRRC27
CACNB2
THBS2
TDRP
DACT3
CD2BP2
WBP11
C12orf60
PSMB7
H2AZ2
FEM1A
CDH6
SUCLA2
SKIL
ST18
EXOC5
AP5M1
ZNF101
ATP13A1
ZNF184
ZEB2
CKB
MTRNR2L1
PIMREG
ZNF121
IQSEC2
USP17L20
USP17L22
AMN1
PALM2AKAP2
ST6GAL1
FZD10
FOXB1
EMSY
TUT1
ADNP
DPYSL3
INSM1
SFPQ
RASSF8
IGSF9
FZD2
PSME3IP1
GAST
RSPRY1
C1orf100
WDR49
YAF2
PRODH2
DDX59
CALR3
C19orf44
KDM5B
SPATA22
TRPM3
DGLUCY
PTAR1
HNRNPUL1
VEZT
FGD6
RAB30
NMNAT3
EPHA2
ZNF343
CCDC172
TRIM38
NOSTRIN
HSPA4
PWWP2A
DNM1L
KANSL1L
GRID2
PPP2R1B
ZIC4
ZNF763
ZNF180
FSCN1
RGS3
PHF19
TMEM132A
HECTD4
HNRNPU
PLAAT4
OTX1
GADD45A
ZNF416
ZIK1
MTRNR2L8
OAZ2
BBC3
SDCBP
C9orf62
ALDH1A2
AUH
ZNF664-RFLNA
ZNF664
CCDC92
RABGAP1L
YEATS2
STAG3
GPC2
PLAAT3
NELFCD
EPHA1
VENTX
KDM2A
TGIF1
BBS7
ZCCHC14
JARID2
NARF
GALNT3
IPO11
NKIRAS1
DLX5
RPL15
PTPN2
THEM4
MYCN
ZNF91
PHOX2B
SYNCRIP
KIAA0895L
IL22RA2
MOV10
UNC13B
LBP
TRIM39
CLEC6A
MSANTD4
ATP6V1G1
WASF1
CDC40
INKA2
ETV6
PPME1
C2CD3
SUFU
ACTR1A
SERINC3
EBF3
GPBP1
ACVR1
DNAJC7
NKIRAS2
ZNF358
QPRT
RBM17
ALPP
COL23A1
ELOVL5
RUNX1T1
ZDHHC5
ZIC1
LPIN1
INTS9
HMBOX1
MTM1
HEXIM2
DST
TMX2
MED19
RBBP6
ZNF697
CHCHD10
LRP8
PIF1
P2RX6
SH3GL3
PCDHGB2
PCDHGA5
DHRS7
ACTL6B
PTPN9
ADGRL2
ZNF250
RBM23
DPP3
ANAPC15
LGR6
GCLC
CLEC19A
WBP1L
PEX11G
PTPRK
HIP1
MVB12A
SFXN1
CCDC85A
ZFP36L1
UBR2
MPPE1
GOLGB1
BAZ2A
EPB41L3
LONRF3
CDK5R1
ADGRA1
SPRED1
OR51H1
PPP1R18
NRM
MEIG1
MMACHC
CCDC163
PTPRN
CSGALNACT1
E2F1
SYT16
KIF3C
RORB
CRYGB
GALNT8
MAPKAPK2
CTIF
PNRC2
SHC3
SCOC
PLEKHG5
HBP1
GDF11
SMARCB1
CITED2
NTN1
KEAP1
VANGL2
SLAMF1
XAB2
PCP2
LGALS12
HOXA11
ABCB5
SYNPO2
RAB15
CHMP4B
SLC33A1
ACSL1
PYDC5
PITX2
SOAT1
HOXA1
PTP4A1
SALL2
AADACL3
RAB5C
MSI2
TIMP4
TSNAXIP1
RANBP10
CD300LB
ZNF8
RAB3GAP2
FBXO46
MEIOSIN
GRIA4
TNRC18
LOC100129484
LRAT
MOSPD3
DLG2
CTH
IL17A
SULF1
ARAP3
SCD
PSIP1
RNF24
PGM2L1
XPC
LSM3
DNAH2
NPAS3
EGFR
PACSIN3
TLX3
FZD7
SPAST
ZSCAN9
NFYC
H2AX
IRX2
C5orf38
DIAPH3
PIK3R3
OGA
ZNF37A
LMO3
PRKRIP1
MLPH
KDM3A
STAU2
AVEN
SDCCAG8
CEP170
GJA10
SCNN1A
LTBR
PIM1
UFD1
CDC45
HELLS
SNX15
SNAP23
ZNF106
SLC26A8
MAPK14
ESYT1
DDAH2
PYGM
ATXN3
PODXL
CAMTA1
TCF4
GSPT2
TPCN1
SLC16A10
RBM47
RASSF10
OCSTAMP
TNFRSF21
GHITM
MB21D2
DHX8
PTGFRN
NDUFS8
LYPD6B
NCL
MYLPF
EHD4
SLC2A12
TBC1D10B
ANKRD66
SHROOM3
UQCRQ
GDF9
SPRING1
RNFT2
DYNLL1
FMO1
SPHK1
G3BP1
GNA12
FBRS
USP17L5
USP17L30
USP17L29
USP17L28
USP17L27
USP17L26
USP17L25
USP17L24
HSDL2
IGFBP3
CCDC33
TUT7
ZNF576
IRGQ
BCAT1
TLE3
ZNF268
ZFHX2
THTPA
JPT1
SORBS2
ABCC2
RBM20
INSYN2B
SESN2
NOTCH3
NBEAL2
CCDC12
CDC25A
ATAT1
TSC22D1
PPARGC1B
APOBEC3F
PHLDB2
SPHK2
RPL18
ZNF469
ZBTB26
PPP1R15A
PLEKHA4
VRTN
LONRF1
PES1
TCN2
RSF1
AAMDC
KXD1
CABYR
LRRC8A
KYAT1
DCAF4L2
LPAR6
G3BP2
REEP6
PCSK4
JADE1
NOCT
C8orf58
ZNF814
BAHCC1
PRR23D2
PRR23D1
HSPB7
LLGL1
IFT27
FBXO11
HAS3
TMEM33
PBK
TRAF7
L3MBTL4