ChIP-Atlas: Target genes

Potential target genes for SOX2

Query protein: SOX2
Distance from TSS: ± 1 kb  ± 5 kb  ± 10 kb
Sort key: SRX5771668 | N2102Ep
 
Color legends
  1000 750 500 250 1 0  (Values = Binding scores of MACS2 and STRING)

Download: TSV (text)
Links: Movie and Document for ChIP-Atlas Target Genes
SOX2's Target genes

◢ SOX2: Average

◢ SRX130061: BJ

◢ SRX10407083: Esophageal squamous carcinoma cell line

◢ SRX10407084: Esophageal squamous carcinoma cell line

◢ SRX5286338: ES cells

◢ SRX5286339: ES cells

◢ SRX5286342: ES cells

◢ SRX5286343: ES cells

◢ SRX11904439: H29

◢ SRX11904440: H29

◢ SRX6852812: HCC2814

◢ SRX277137: HCC95

◢ SRX6852810: HCC95

◢ SRX3205373: Head and neck squamous cell carcinoma 

◢ SRX702105: hESC derived mesendodermal cells

◢ SRX702106: hESC derived mesendodermal cells

◢ SRX702108: hESC derived mesendodermal cells

◢ SRX1047416: hESC derived neural cells

◢ SRX11919277: hESC derived neuromesodermal cells

◢ SRX011616: hESC H1

◢ SRX1047413: hESC H9

◢ SRX277140: hESC H9

◢ SRX6101128: hESC H9

◢ SRX6101129: hESC H9

◢ SRX266860: hESC HUES64

◢ SRX266861: hESC HUES64

◢ SRX702107: hESC HUES64

◢ SRX702109: hESC HUES64

◢ SRX20532164: hESC HUES8

◢ SRX20532165: hESC HUES8

◢ SRX5286340: hESC WIBR2

◢ SRX5286341: hESC WIBR2

◢ SRX5286344: hESC WIBR2

◢ SRX10101684: hESC WIBR3

◢ SRX10101685: hESC WIBR3

◢ SRX8026053: hESC WIBR3

◢ SRX8026055: hESC WIBR3

◢ SRX968908: iPSC derived neural cells

◢ SRX968909: iPSC derived neural cells

◢ SRX968910: iPSC derived neural cells

◢ SRX968911: iPSC derived neural cells

◢ SRX968912: iPSC derived neural cells

◢ SRX1813586: iPS cells

◢ SRX1813587: iPS cells

◢ SRX20140858: iPS cells

◢ SRX20140859: iPS cells

◢ SRX512370: iPS cells

◢ SRX6852811: KNS-62

◢ SRX10035162: KYSE-140

◢ SRX10407085: KYSE-70

◢ SRX277131: KYSE-70

◢ SRX6852808: LK-2

◢ SRX6852813: LK-2

◢ SRX6852814: LK-2

◢ SRX026880: LN-229

◢ SRX359955: LoVo

◢ ERX2260038: Lung cancer

◢ ERX2260040: Lung cancer

◢ ERX2260044: Lung cancer

◢ ERX2260046: Lung cancer

◢ SRX2731713: Lung cancer cell line

◢ SRX6750797: MDA-MB-231

◢ SRX6750798: MDA-MB-231

◢ SRX1813580: MRC-5

◢ SRX1813581: MRC-5

◢ SRX1813582: MRC-5

◢ SRX1813583: MRC-5

◢ SRX1813584: MRC-5

◢ SRX1813585: MRC-5

◢ SRX2732210: MRC-5

◢ SRX2732211: MRC-5

◢ SRX5771664: N2102Ep

◢ SRX5771666: N2102Ep

◣ SRX5771668: N2102Ep

◢ SRX11904443: NCI-H1836

◢ SRX11904444: NCI-H1836

◢ SRX6852809: NCI-H520

◢ SRX11904441: NCI-H82

◢ SRX11904442: NCI-H82

◢ SRX10445285: Neural crest cells

◢ SRX10445293: Neural crest cells

◢ SRX10445303: Neural crest cells

◢ SRX10445312: Neural crest cells

◢ SRX20140860: Neural progenitor cells

◢ SRX20140861: Neural progenitor cells

◢ SRX20140862: Neural progenitor cells

◢ SRX20140890: Neural progenitor cells

◢ SRX20140891: Neural progenitor cells

◢ SRX20140892: Neural progenitor cells

◢ SRX5716451: Neural progenitor cells

◢ SRX5716452: Neural progenitor cells

◢ SRX5716453: Neural progenitor cells

◢ SRX330107: ReN-VM

◢ SRX330108: ReN-VM

◢ SRX277134: T.T

◢ SRX3367070: TE-5

◢ SOX2: STRING

SMARCA2
MTHFD1L
ZNF483
NRG1
CD99L2
REST
LRRN1
TMPRSS11E
SPATA45
ZSCAN2
BTG2
ECE1
FLAD1
SAMHD1
SFRP2
SLA2
SOX6
TCF7L1
APOBEC3F
OR5AR1
RMND5B
TIMP4
ID3
FAM222B
DPPA5
ZNF343
FGF1
SNRPN
ARHGEF38
SHISA5
ZSWIM3
ACOT8
SHCBP1L
METTL11B
CACHD1
TRAPPC8
CRYGB
CELF4
DNMT3B
EDDM3B
DCAF4L1
ZNF398
HOXD13
HOXD12
GDF11
PEAK1
HMG20A
NES
IFT80
MRPL20
IL34
ACOXL
VENTX
PHC1
RCN1
MED12
GDF3
PARP1
FBP1
PIPOX
WFDC8
GAD2
SLTM
HESX1
RASGRF2
CAPN3
BCOR
LMCD1
TDGF1
DUSP6
TRIM2
PUF60
GIMAP5
NTRK2
NCDN
KIAA0319L
SACS
ANKRD1
LEFTY2
LIN28B
FAM20A
CDX2
FBXW11
ZNF608
PRICKLE1
LHFPL4
FZR1
MYSM1
CDYL
DND1
SMAGP
RPH3A
AMN1
VCAN
SEC14L5
PSMD9
HPD
SYT2
C22orf39
SNURF
MAGEB2
SLC23A2
TALDO1
KRT6B
MFSD4B
GLDC
TMEM43
CHCHD4
GOLGA6D
ETV1
FGD4
SLC35A5
ATG3
ABCB5
ESRP1
SYN3
MTRNR2L8
CLDN9
ZFHX3
EXT1
JAML
L1TD1
FZD8
TRIM24
PYGB
MAD2L2
DRAXIN
PNRC1
ISOC2
HBG2
CD24
TRIML2
AK4
TRIT1
TET3
ZNF296
GEMIN7
FBXO40
UGT1A6
CNGA1
NIPAL1
NEPRO
CDC42EP4
NPSR1
USP44
C10orf95
WDHD1
SOCS4
GSN
LIN28A
SELPLG
NATD1
ITGB3
DOK7
FRAT2
PRDM14
JPT1
MRPL18
PCDHB8
PCDHB16
FZD2
ZNF875
PDGFA
RAD18
PCDHGC5
PCDHGC4
TRPC4AP
PRODH
LOC102724788
LEKR1
AGO1
ALDH1A2
NECTIN1
PITPNM2
STX16
ASIP
DNMBP
FGFR2
ALDH2
RASA1
DPPA4
ZNF318
REV3L
ESX1
SMPDL3B
TRPM1
UTF1
PSIP1
RESF1
GOLGA6A
BIRC6
PREX2
ASH2L
TRIP4
MTM1
PCLAF
CDC14B
SNX19
IGBP1
NFE2L3
EPHA4
MDN1
NDUFV1
INO80D
TMEM47
TCHP
TMEM167B
LONRF3
FGD3
MOG
PCBP1
TNFSF8
LIPK
ZNF436
NDST1
PAK1
ADAMTS16
NACAD
SENP2
NRG2
TBC1D16
PTAR1
NAV2
SALL3
APOBEC3G
KRBA2
SRCIN1
IER5L
DIDO1
YIPF4
ANKRD40
RNF186
GPRC5B
PPP1R16B
RHBDD2
OBI1
CSF2RB
SLC25A16
PCDHB13
ACCS
GIGYF1
GOLGA6C
PTPRN
SOX14
KCNMB2
HDAC9
FGF4
LYPD6B
GOLGA6B
UNC13B
ZNF565
SPIC
GXYLT2
OLFML3
AEBP2
GABBR1
PLEKHA5
GTF2I
DDX39A
SP7
KCNIP4
WDR44
PPP2R3A
UHRF1BP1L
FIGNL2
MACROH2A1
SLAMF1
MEIS2
BCAT1
YAF2
KRT8
PALM2AKAP2
USP7
CNR2
CMAS
LRRC47
ITGB5
PGPEP1
MBOAT2
MAP6
BEND3
SLC38A9
KIAA1522
PSMG3
NDUFAB1
B3GALT5
MBNL3
ANP32A
SAMD5
HES3
ICMT
LRRTM4
HECW1
PWWP3A
CNPY1
NADK
DDX43
LRAT
PRUNE2
ZNF335
CSHL1
MUC1
ZNF90
METTL7A
CHFR
TMC5
NKX1-2
CCDC169-SOHLH2
CCDC169
MRS2
SYNPO2
ZNF781
ZNF814
CAAP1
MCCC1
JARID2
PDCL
SGMS1
CCDC130
SPHK1
ZFYVE1
ABCC2
FGF6
AIRE
PDE1B
H3C15
H3C14
H2AC19
H2AC18
REXO4
ADAMTS13
IFIT3
KLHL4
AADACL3
KRTAP5-9
PF4
PPBP
GJA1
AUH
GSPT2
CDC42EP3
PRR15
DHX32
LINGO1
PIN4
RAX
CSGALNACT1
KCNJ1
AQP2
HELLS
TMEM9B
LYPD1
TIAM1
ZFP3
GYG1
SLC20A2
LHCGR
KLF17
DENR
TSPAN18
SLFN12
UPF1
RAPGEF5
SESTD1
MTF2
CCDC33
COPZ1
ADAR
KDM2B
F11
NFKB2
GADD45G
SOCS3
MVB12A
GABRQ
PCDH1
FAM24B
CCL2
CCDC144A
HYOU1
DUSP12
MMACHC
CCDC163
MGAT4C
SASH1
RMND1
ARMT1
CFAP410
IL21
OR6C3
AP2B1
SCAF4
RIF1
CDC25A
FAM180A
WDR49
GAST
PLAGL1
DNAJB1
SCGB3A2
SGMS2
SOX2
AASS
HHIP
OCSTAMP
NEUROG3
SLC46A1
ZNF664-RFLNA
ZNF664
CCDC92
RNASE9
PLPP3
SOX15
SLC7A5
TRIM16L
PCGF6
ABL2
SYTL2
SALL4
ZNF438
SDHC
MT1E
SLC39A8
ETV4
EPB41L4B
LHFPL5
CLPS
HSBP1L1
CCDC167
IQCF2
MINAR1
TBC1D1
GRAMD2B
SERINC3
ATP6V1G1
PBDC1
KCNN2
LRGUK
CEP135
ZNF536
SOAT1
ETNK2
ZNF600
CFLAR
SLC35F6
GABRB3
ARSL
ZNF649
RNASE10
CDH26
TINAGL1
ZC3H12B
TBC1D23
TLL2
KAT8
POU5F1
PRRC2B
NANOG
ELOVL6
SLN
PDPN
KLHL5
CCNT1
FAM126A
MS4A12
CCDC85A
DNAJC7
NKIRAS2
GCSAM
OR6J1
PPP1R18
NRM
ZNF552
SOX5
DHRS3
AGL
ZNF624
PRMT2
SRSF4
CDH4
BCKDK
PXDC1
GJA10
IL22RA2
ZMAT2
SMAD3
ARHGAP36
GPC4
RAB40AL
CCDC172
SHF
MAD1L1
TP53
LRRC74A
RAD54L2
NAXD
GPR149
FHL1
ZNF202
ERVH48-1
SRRM4
PMEPA1
CER1
FZD5
CCL26
C19orf25
TRPM3
DEFB107B
DEFB107A
PRR14L
SULT6B1
CEBPZOS
FAM200B
TUT4
GATA3
HOXB1
HCAR2
THBS2
ATP5F1E
SMIM11B
SMIM11A
SMIM14
DCLK1
RTN4
SPATA22
NCOA7
VOPP1
KRTAP3-1
NUP205
BEST3
ETS1
SVOPL
SLC13A2
EPHB3
C1R
SURF6
MSH6
GALNT8
IGSF1
PADI4
LEFTY1
THOC2
RASAL2
SERPINB6
DCXR
ACSL1
IFRD1
RPS10-NUDT3
RPS10
EIF4EBP2
EPB41L1
NEB
RPSA
SLC35E4
EFCAB8
SPP1
LOC150051
ELAC2
EEA1
ZIC5
CAVIN3
OR2S2
PRKAA1
ZSCAN12
ZNF532
ANK2
MSX2
BIN2
SUCLA2
TMEM68
TGS1
KMT2B
LAPTM5
PROM1
RGSL1
POLR1F
SUB1
TNRC6A
TFAP2C
RIMBP2
MOV10
CLEC7A
GPR160
VSIG10
MECOM
CACNA2D1
ABCC10
HLA-F
CDH10
PAN2
IL23A
DPH6
PNLDC1
LRRC4C
SPAG9
IHH
TMEM220
LPCAT4
GPR179
FAM153B
PCDHGB2
PCDHGA5
TMEM229B
IRF6
RPL8
ZNF517
ITPK1
KIF19
PRSS41
TRIM34
FAM83F
ZMIZ2
TRIB2
S100A13
SIGLEC11
LANCL3
INSM1
DPYSL3
CHD7
ZNF200
UBAP2
MRGPRX3
CXCR1
CHCHD3
KLF5
MAP2K5
PPP1R3B
CYP2S1
TRIM64B
SORBS2
CCN2
RIPK4
EMD
TIAM2
PTPN12
SLC10A2
JAG1
FAM189A2
SPRY4
STMN1
DTX2
SNX16
CD9
TKT
GLIPR2
TTLL6
ZCCHC3
KLF6
OAT
PHF19
DRD1
SUCO
GLI2
WBP1L
ST18
NCALD
TOX3
TSGA10IP
ACSBG2
SLC25A35
RANGRF
SLC2A14
ADA2
TACC2
SLC2A10
RIPOR3
TAF13
PLAC8
SFT2D3
SLC3A2
BFAR
LMAN2L
ZNF260
MSL2
TMEM266
PPP1R17
TMEM87A
GANC
EZH1
WNT5B
SLC2A11
USP48
PCSK1
RPE65
ARHGAP19
MANSC1
FBLN1
SPEN
PPP1R8
MAGEB17
IL20
SYNDIG1L
POSTN
GLRB
DYDC2
DYDC1
NRCAM
TPCN2
CSDE1
DERA
MYF5
TMCC1
ZDHHC1
REX1BD
EEPD1
CNOT11
PLAAT3
DTD1
OVCH1
TNFSF4
LOC102723623
GOLGA6L22
HOXA11
PPP5C
SPRY2
GCLC
VMO1
GLTPD2
VAPB
PMS2
AIMP2
ARID5A
LBP
SLC22A23
OLAH
C16orf78
RBM5
ITIH1
PCDHB5
SCGB1D1
AHCYL2
FUBP1
DNAJB4
DACT3
ZNF729
RPUSD3
HOXB2
HSD17B14
GCNT2
GPC6
DCLRE1C
ZYG11A
FOXP1
GRM4
ITM2B
OR8B3
EGFR
TNP1
CLCC1
PGAP6
SPATA12
TAGLN3
NEBL
CAPN10
ADGRA1
SELENOT
CHD1L
IQSEC2
MARCHF2
TFE3
RNF213
KLRC1
MRPS36
NIT2
RAP1A
RAB42
PFKP
DGLUCY
CCDC200
ZBTB2
FRS2
SLCO4C1
PSEN2
RGS3
RBFOX2
TRIM22
TRIM5
SP9
ANO10
ABHD5
ZSCAN10
MPI
AASDH
PIK3C2A
GUCA1A
RPS14
MTA2
DNTT
MTHFD1
GINS3
RORC
OR1A1
RNF19A
CMTM4
PLEKHA7
ITPRIP
C1orf167
CASP2
TMEM139
MED4
KRT82
UPRT
SP4
LRRC59
KRT18
KLF3
TBCA
NFIX
PITX2
SLC36A1
MYOM1
GOLGA6L1
ERICH3
BRINP1
TRIM54
ETV6
HGC6.3
LIFR
ANKRD66
HLCS
CTNNA3
MRPS15
LRRTM3
RNF24
SLC35G4
ZNF566
PLIN2
USP50
RAB19
SLC37A3
PGBD5
SPTLC2
TTC39B
CNBP
ZNF25
GPAA1
EXOSC4
ZNF391
COLEC11
CMC2
SCD5
NGRN
FGFR4
RBM20
THY1
AJAP1
S100A16
BBC3
SYBU
SPATA4
DIRAS3
LGR6
ZCCHC12
STOM
DST
COX8C
PPARGC1B
IPMK
CISD1
UTS2
STOX2
NSD1
ATG9B
ABCB8
NLGN1
GGTLC1
TMEM53
ARMH1
COL23A1
HLTF
NODAL
PPP2R2C
PER2
TSPAN14
RFX4
SP5
HEY2
RIMKLB
SH2D4B
RND1
TMC1
KDM4A
TJP2
MIDEAS
CCR8
ATP9B
NSMAF
OLIG3
ADCK1
RIIAD1
SRSF7
SKIDA1
MLLT10
RTP3
GGTLC2
RASSF8
PPARG
PHC2
TEAD4
MAEL
ILDR2
VSNL1
H3-2
ZNF584
DIAPH1
VPS37B
CLCF1
ARSG
MFSD6
GFRA4
HMGCL
SLC16A8
APOBEC3D
APOBEC3C
TFPI
SEC22B
RAB7A
SBSN
GAPDHS
DHDDS
PLA2G4D
PLD5
ADGRF2
TGIF2-RAB5IF
TGIF2
RPL23A
RAB34
SLC24A1
EMSY
HROB
HYAL1
GLUL
LBH
BARX1
GTF3C4
DDX31
ISL1
RPL32
SET
SLC16A12
MUC3A
GREB1
OAZ3
KCNA1
FOXD1
THEM4
GP5
IGFBPL1
OR1E3
MB21D2
PLD2
PBLD
HNRNPH3
DEFB108B
EIF4E3
PRSS8
FOXC1
LRP5L
SLC5A5
INPP5F
COL26A1
ARID2
AIFM1
FRMD3
HADH
GPSM3
RNF43
HAUS6
ARRDC2
KRT77
ATR
FOXE1
SPAG5
UBASH3B
MFF
NMNAT3
PNISR
CAMTA1
IFITM3
IFITM1
RNF17
KMT5C
TRIM39
RBPJ
DES
TRAF2
CTBP2
TBC1D9
SLC6A12
SLC9A4
ID1
FZD10
CCT2
MDK
ARAP3
SYT16
TTLL7
ODF2
FMN1
NHEJ1