ChIP-Atlas: Target genes

Potential target genes for SOX2

Query protein: SOX2
Distance from TSS: ± 1 kb  ± 5 kb  ± 10 kb
Sort key: SRX277134 | T.T
 
Color legends
  1000 750 500 250 1 0  (Values = Binding scores of MACS2 and STRING)

Download: TSV (text)
Links: Movie and Document for ChIP-Atlas Target Genes
SOX2's Target genes

◢ SOX2: Average

◢ SRX130061: BJ

◢ SRX10407083: Esophageal squamous carcinoma cell line

◢ SRX10407084: Esophageal squamous carcinoma cell line

◢ SRX5286338: ES cells

◢ SRX5286339: ES cells

◢ SRX5286342: ES cells

◢ SRX5286343: ES cells

◢ SRX11904439: H29

◢ SRX11904440: H29

◢ SRX6852812: HCC2814

◢ SRX277137: HCC95

◢ SRX6852810: HCC95

◢ SRX3205373: Head and neck squamous cell carcinoma 

◢ SRX702105: hESC derived mesendodermal cells

◢ SRX702106: hESC derived mesendodermal cells

◢ SRX702108: hESC derived mesendodermal cells

◢ SRX1047416: hESC derived neural cells

◢ SRX11919277: hESC derived neuromesodermal cells

◢ SRX011616: hESC H1

◢ SRX1047413: hESC H9

◢ SRX277140: hESC H9

◢ SRX6101128: hESC H9

◢ SRX6101129: hESC H9

◢ SRX266860: hESC HUES64

◢ SRX266861: hESC HUES64

◢ SRX702107: hESC HUES64

◢ SRX702109: hESC HUES64

◢ SRX20532164: hESC HUES8

◢ SRX20532165: hESC HUES8

◢ SRX5286340: hESC WIBR2

◢ SRX5286341: hESC WIBR2

◢ SRX5286344: hESC WIBR2

◢ SRX10101684: hESC WIBR3

◢ SRX10101685: hESC WIBR3

◢ SRX8026053: hESC WIBR3

◢ SRX8026055: hESC WIBR3

◢ SRX968908: iPSC derived neural cells

◢ SRX968909: iPSC derived neural cells

◢ SRX968910: iPSC derived neural cells

◢ SRX968911: iPSC derived neural cells

◢ SRX968912: iPSC derived neural cells

◢ SRX1813586: iPS cells

◢ SRX1813587: iPS cells

◢ SRX20140858: iPS cells

◢ SRX20140859: iPS cells

◢ SRX512370: iPS cells

◢ SRX6852811: KNS-62

◢ SRX10035162: KYSE-140

◢ SRX10407085: KYSE-70

◢ SRX277131: KYSE-70

◢ SRX6852808: LK-2

◢ SRX6852813: LK-2

◢ SRX6852814: LK-2

◢ SRX026880: LN-229

◢ SRX359955: LoVo

◢ ERX2260038: Lung cancer

◢ ERX2260040: Lung cancer

◢ ERX2260044: Lung cancer

◢ ERX2260046: Lung cancer

◢ SRX2731713: Lung cancer cell line

◢ SRX6750797: MDA-MB-231

◢ SRX6750798: MDA-MB-231

◢ SRX1813580: MRC-5

◢ SRX1813581: MRC-5

◢ SRX1813582: MRC-5

◢ SRX1813583: MRC-5

◢ SRX1813584: MRC-5

◢ SRX1813585: MRC-5

◢ SRX2732210: MRC-5

◢ SRX2732211: MRC-5

◢ SRX5771664: N2102Ep

◢ SRX5771666: N2102Ep

◢ SRX5771668: N2102Ep

◢ SRX11904443: NCI-H1836

◢ SRX11904444: NCI-H1836

◢ SRX6852809: NCI-H520

◢ SRX11904441: NCI-H82

◢ SRX11904442: NCI-H82

◢ SRX10445285: Neural crest cells

◢ SRX10445293: Neural crest cells

◢ SRX10445303: Neural crest cells

◢ SRX10445312: Neural crest cells

◢ SRX20140860: Neural progenitor cells

◢ SRX20140861: Neural progenitor cells

◢ SRX20140862: Neural progenitor cells

◢ SRX20140890: Neural progenitor cells

◢ SRX20140891: Neural progenitor cells

◢ SRX20140892: Neural progenitor cells

◢ SRX5716451: Neural progenitor cells

◢ SRX5716452: Neural progenitor cells

◢ SRX5716453: Neural progenitor cells

◢ SRX330107: ReN-VM

◢ SRX330108: ReN-VM

◣ SRX277134: T.T

◢ SRX3367070: TE-5

◢ SOX2: STRING

NRARP
NAV2
FAM227A
CBY1
NOTCH1
LFNG
PYCR2
SINHCAF
HMGB1
PLPP2
KDM2A
MED25
FUZ
TGIF1
NDST1
MTF2
NDUFB5
MRPL47
DNM1L
PTMA
NEUROD1
TMEM88B
ANKRD65
MYEOV
ZSCAN2
FRG2
SMCO1
DPP3
ARIH1
FRG2C
CLCF1
FGF19
ESRP1
KMT2B
ITGB4
WDFY2
ARID2
FHL2
PHF5A
ACO2
MTDH
MUC1
MCCC1
ISL2
TINAGL1
MYL12A
VWCE
LIMK2
SPINT1
FBXL19
LYPD1
TIAF1
F11R
TMEM205
CCDC159
RAB3D
CNP
ARSG
SMIM3
DISP3
JUP
SIX2
ZNF775
KCNN2
IQCH
AAGAB
RFLNA
DDX17
ASMTL
ALDH7A1
VASH2
OLFML3
GLI2
SH3GL3
CHD6
CAPNS2
HIPK1
KLF7
CPT1A
TCF12
ERGIC2
DST
TIA1
CYTH2
SRI
OAZ2
HNRNPDL
ENOPH1
N4BP1
NDUFS5
CCT2
CEP41
SLC16A13
SOX5
ZNF428
PLEKHA3
FKBP7
IFRD1
POLR3E
ETV1
CPNE2
NUP160
EP300
CUEDC1
MUS81
CFL1
MAP3K2
OTUB2
GRK6
YWHAZ
TTF2
CAPRIN1
ESRRA
CATSPERZ
PER2
PELATON
CYP1A1
UNK
H3-3B
SHF
KLK6
SOX6
COL23A1
C11orf58
PMEPA1
ZFC3H1
THAP2
SPHK1
SUFU
ACTR1A
POLB
SLC4A7
KIF26B
ZNF268
CDH13
CDCP2
PDIA4
HNRNPC
ZSCAN9
SYNCRIP
MS4A2
LRRC25
EFHC1
DUX4
PIMREG
RHOBTB2
TIAL1
GTPBP6
NPIPB12
AHNAK2
ZFAND3
ZNF506
C6orf132
SUN1
BCAS2
ETNK1
RSF1
AAMDC
GPR39
CDC42EP3
VAMP5
TSPAN14
SLC2A4
SLC33A1
CNOT3
TNRC18
LOC100129484
ITGB1
ATAT1
LPIN1
H2BC4
H2AC6
TJP2
ABCC10
ARHGAP5
ST8SIA1
EXOC5
AP5M1
PDP1
FBRS
NPIPB5
ZNF195
ETV5
FXR1
SHISA7
SLC25A36
SRSF7
NASP
UBTD2
ACOT1
EFNA1
TENT5C
BMF
DMRTA2
TTC13
HID1
KNTC1
SOX2
CNIH4
PIN4
TNFRSF21
EXOSC2
OR7A10
ZNF608
HES1
ABCC1
JMJD7-PLA2G4B
JMJD7
SLC7A5
IVNS1ABP
TRIB1
RTBDN
MAST1
EIF1AX
PRKAB2
CHD1L
IRAG2
ACSL6
PSME2
EMC9
EPB41L4B
EIF4A2
KIAA0040
PRDM2
ID1
MEF2C
BCAS1
NPIPB8
NPIPA3
NPIPA2
MYL12B
ONECUT2
WDR36
S100A16
MBNL1
TMCC1
RBFOX2
DHRS3
ZNF627
FGF1
HMGN1
ZNF37A
TMEM200C
ZDHHC5
LYRM1
DCUN1D3
UBR2
RALGDS
CEP63
ANAPC13
FOXO6
SNX16
TBC1D31
ADRM1
LSG1
RASAL2
ABCC2
CSRNP2
EBAG9
PGBD2
CLDN4
GDF5
CEP250
TOP1
GSN
HSPH1
CSDE1
PPP1R2
FAM83B
LMNA
RAPGEFL1
DOCK5
FAM83G
AKNA
PRORP
PPP2R3C
KDM3A
ZBTB6
GPSM3
NTN5
H4C15
H4C14
C15orf40
FZR1
NRCAM
DHX32
TES
CAST
ZNF2
MAST4
LNX1
RBBP6
FMNL3
NCOA4
MOB3C
MT1B
ST6GAL1
HEXIM2
G3BP2
NFE2L2
ETFRF1
CFAP94
PTPN12
PTX3
ID3
DGLUCY
NEBL
TEX9
RFX7
MARCKS
NWD1
RRBP1
VDAC2
CASQ2
RABEP2
TLX3
C2CD5
ETFBKMT
PSME3IP1
C1QTNF7
RSPRY1
PLA2G6
GPR158
SPAG4
GREB1
GADD45A
CCND1
SRSF6
ZNF806
TMEM184A
ADAR
KRT6A
PIGX
CEP19
RAPGEF5
POU2F1
MCM7
AP4M1
HNRNPU
C15orf62
SPRY4
MSANTD4
CCDC88A
HLTF
TAX1BP3
EMC6
ZNF84
RIOX1
TMEM107
PDE4D
MAP3K9
CREM
EXD1
CHP1
ARNTL2
DCLRE1B
AP4B1
MTRNR2L8
OGA
NIBAN2
S100A5
S100A4
S100A3
TOMM40
TSPAN13
GTF2H4
DDX5
RPS6KB2
CD55
NPIPB3
CLDN10
PNN
TRAPPC6B
FAR1
KCNK15
GET3
ZNF763
TUT7
WDR33
OIT3
H2AJ
AMN1
ZSWIM4
SNAPC3
DDR1
ARF4
PSMB7
PHACTR2
ZNF669
DENND4A
NPIPB13
PIF1
SPATA12
RNF20
GGPS1
ARID4B
MTA3
KCNG3
ZNF433
KMT5B
CA5B
KMT5A
AGPS
SLC25A21
PTPRH
ZBTB26
GSG1
SLC25A45
FRMD8
CFAP20
NR1D1
CYP2S1
SPAAR
M6PR
KLRG1
BAHCC1
THAP10
LRRC49
TMEM249
SLC52A2
FBXL6
DCBLD2
CD248
BORCS6
MEX3D
LDHB
RTN4
MIDEAS
SF3B5
PTGES2
ZNF140
TNPO1
YLPM1
IFT27
RNF13
ARID5A
STAG3
GPC2
VPS50
HEPACAM2
LAMP1
HOPX
NT5C
WDR54
C2orf81
DKK3
EEF1AKNMT
LOC100505841
TNFAIP8
RNF103-CHMP3
RMND5A
CPNE8
BCL2L11
SPRING1
RNFT2
BRMS1L
CDCA4
FAM107B
ANKRD12
SLCO1A2
CLEC2B
SPEN
PARP2
PHAX
NEFH
BTG1
LNPEP
KIAA0895L
LTO1
ZNF720
ABHD2
LARS1
CTXN3
LAMC2
SMARCA2
REST
CDX2
NES
TMPRSS11E
SACS
DPPA5
PIPOX
ARHGEF38
METTL11B
DNMBP
ZNF483
CACHD1
AGO1
DUSP6
TCF7L1
NRG1
RMND5B
ANKRD1
LRRN1
HDAC9
CD99L2
GOLGA6D
SFRP2
SOCS3
NTRK2
MTRNR2L1
GIMAP5
FAM222B
SPATA45
PF4
GDF11
PPBP
PHC1
SRRM4
SHCBP1L
BCOR
PRICKLE1
LMCD1
SNRPN
MFSD4B
RPH3A
OBI1
SAMHD1
MTHFD1L
BTG2
OR5AR1
CLDN9
EDDM3B
POU5F1
GAD2
SLTM
FLAD1
ZSWIM3
ACOT8
APOBEC3F
FBXW11
DNMT3B
TALDO1
ZFHX3
TDGF1
MED12
HESX1
SHISA5
RIIAD1
RASGRF2
ETS1
VENTX
ZNF398
MRPL20
NADK
NFE2L3
FGD3
UTF1
SCGB3A2
PSMD9
HPD
VCAN
DDX43
NANOG
ETV4
CELF3
GOLGA6B
WFDC8
ZNF343
NCDN
KIAA0319L
TRAPPC8
GOLGA6A
FGD4
LEFTY2
LZTS1
RCN1
FGFR2
CER1
GADD45G
USP44
DAGLB
IER5L
CELF4
CNPY1
TRIM24
FAM120B
MYSM1
HES3
FIGNL2
FGF2
FZD8
LIN28B
GPRC5B
MTRNR2L2
MSH3
DHFR
FBP1
PPP1R16B
ICMT
GNAI2
PARP1
SNURF
GOLGA6C
IL34
RIF1
SLA2
KIFBP
PLAGL1
LEFTY1
MRS2
FRAT2
SGMS2
SAMD5
ITPRIP
BFSP1
GXYLT2
FBXO40
PRDM14
PALM2AKAP2
FZD2
TRIM2
FOXP1
HGS
ARL16
MACROH2A1
TRIP4
RASA1
HOXD13
HOXD12
CCDC169-SOHLH2
CCDC169
DHDDS
DND1
LRRTM3
WNT5B
SLC35A5
ATG3
LIPK
ZNF532
CRYGB
JPT1
PDPN
MDN1
LIMCH1
LINGO1
GJA1
SCAF4
TRIML2
ECE1
APOBEC3D
APOBEC3C
SLC2A14
MAD2L2
RFX4
PREX2
SOX14
PRR15
SPIC
ECT2
WBP1L
ST18
SYT2
PDCL
POSTN
UNC13B
CDC14B
TUBB
MDC1
EEF1A1
CD24
BEND3
PCBP1
CHFR
VOPP1
FAM180A
DCAF4L1
AASS
ZNF436
HMOX1
TGIF2-RAB5IF
TGIF2
TMC5
SALL3
GDF3
ALDH1A2
MTM1
DRAXIN
ZNF335
ITGB5
DLL1
LRRTM4
PCLAF
L1TD1
TIMP4
FAM200B
ZSCAN10
FOXD1
SH3BP4
CARHSP1
DPH6
GABRQ
WDHD1
SOCS4
SRCIN1
ADA2
STK31
HBG2
ZNF781
IFT80
DDX3X
TBC1D16
CHN2
MOG
DENR
TIAM2
ITGB3
RGS3
ISOC2
CCDC130
PEAK1
HMG20A
PUF60
ZNF304
SORBS2
KDM2B
SENP2
MMACHC
CCDC163
SYN3
SLC39A8
PGPEP1
TTYH1
SASH1
PGK1
AK4
CACNA2D1
CAMTA1
TNC
EXT1
C8orf58
AHCYL2
USP7
DUSP12
GCNT2
WDR49
C1orf127
SLC46A1
PTAR1
PLEKHG1
TSKS
AP2A1
AEBP2
PNRC1
GTF2I
KCNJ1
AKIRIN2
LYPD6B
C10orf95
PXMP4
ACVR1
EMSY
DOK7
UGT1A6
C20orf96
ABCB5
GABRB3
SNX19
UFD1
CDC45
ZCCHC3
TNFSF8
TMEM47
NDUFV1
LRIG1
CAPN3
PACSIN2
ZNF536
ANK2
FAM24B
ZNF296
GEMIN7
CCN2
PSIP1
ABL2
VANGL2
NECTIN1
TRIB2
LIN28A
FZD5
KLF3
PITPNM2
TPST2
TCF7L2
MYCL
SLC20A2
REV3L
ESR2
TIAM1
TESK2
INSM1
AASDH
SMAD3
PDE1B
AUH
UBAP2
ZNF875
PRODH
LOC102724788
ZBTB45
OSBPL1A
DIDO1
HHIP
CCL26
MVB12A
KRT8
GLDC
ZNF600
NDUFAB1
PRKAG2
ZNF649
NPSR1
PPP2R3A
DPPA4
SLFN12
ATP6V1G1
ZNF664-RFLNA
ZNF664
CCDC92
BCL9
RPL8
TRPC4AP
SLC3A2
ZNF565
SMIM14
SLC23A2
TFE3
MAGEB2
CDH10
TMEM43
DICER1
CHCHD4
PGBD5
NEUROG3
SUCO
TRPM1
SAPCD2
PXDC1
CNOT11
CHMP7
PRRC2B
H3C15
H3C14
H2AC19
H2AC18
LRAT
SOAT1
RNASE9
CDYL
TLE1
TFAP2A
TET3
ESX1
PYGB
BIN2
FAM20A
FAM153B
TNRC6A
OR2T1
EPB41L1
KLF6
TMUB2
MTHFD1
MMP10
B3GALT5
STOX2
LRRC47
BFAR
ZBTB18
VPS37B
WDR74
CRISPLD1
CFLAR
PDGFA
LRTM1
DTNA
MAP6
KLF5
ACSL1
SORT1
TNFRSF6B
SELPLG
PIK3R3
BCAT1
INO80D
CSF2RB
BRINP2
NXPH2
YIPF4
PREP
G3BP1
CNGA1
PAK1
KRTAP3-1
ETV6
STMN1
PLPP3
CTNNA1
LRRTM2
KCNIP4
ZNF517
GAST
CCDC85A
GSAP
GPC4
TRMT2A
RANBP1
RMND1
ARMT1
ADAMTS16
ARHGAP42
ZNF202
SACM1L
PIK3C2A
LRGUK
ACOXL
BBC3
DACT3
PNCK
APOBEC3G
UBQLN4
LAMTOR2
DEFB114
DEFB113
ZNF814
F11
ZMAT2
CXADR
CELSR3
TKT
NIPAL1
CTNND2
IFI16
DHX8
SAXO1
TACC2
EPHB3
PTPRN
EXOSC9
CD2BP2
ZFP3
HES5
PANK4
TP53
ANAPC15
YAF2
MRPL18
TOX3
NUAK1
SLAMF1
SDCBP
TRDMT1
ADGRL2
PLEKHB1
OSBPL2
SHC3
ERMN
MBOAT2
HOXB1
SDHC
SALL4
CAAP1
DNAJC7
TRIM13
CP
ARSL
PAFAH2
ERBB2
SLCO5A1
PLCH1
LYPLAL1
MEIS2
C22orf39
VEZT
UPF1
FGD6
SPTLC2
MAMDC2
ANKRD6
CD200
ASIP
OR6C3
LLGL1
SLC6A8
AJAP1
RABGAP1L
TUT1
NKIRAS2
CCDC200
SLC25A11
RNF167
SNAP23
EPHA4
STRA6
GALNT8
DCLK1
LONRF3
RAB30
PPME1
C2CD3