ChIP-Atlas: Target genes

Potential target genes for SOX2

Query protein: SOX2
Distance from TSS: ± 1 kb  ± 5 kb  ± 10 kb
Sort key: SRX5286344 | hESC WIBR2
 
Color legends
  1000 750 500 250 1 0  (Values = Binding scores of MACS2 and STRING)

Download: TSV (text)
Links: Movie and Document for ChIP-Atlas Target Genes
SOX2's Target genes

◢ SOX2: Average

◢ SRX130061: BJ

◢ SRX10407083: Esophageal squamous carcinoma cell line

◢ SRX10407084: Esophageal squamous carcinoma cell line

◢ SRX5286338: ES cells

◢ SRX5286339: ES cells

◢ SRX5286342: ES cells

◢ SRX5286343: ES cells

◢ SRX11904439: H29

◢ SRX11904440: H29

◢ SRX6852812: HCC2814

◢ SRX277137: HCC95

◢ SRX6852810: HCC95

◢ SRX3205373: Head and neck squamous cell carcinoma 

◢ SRX702105: hESC derived mesendodermal cells

◢ SRX702106: hESC derived mesendodermal cells

◢ SRX702108: hESC derived mesendodermal cells

◢ SRX1047416: hESC derived neural cells

◢ SRX11919277: hESC derived neuromesodermal cells

◢ SRX011616: hESC H1

◢ SRX1047413: hESC H9

◢ SRX277140: hESC H9

◢ SRX6101128: hESC H9

◢ SRX6101129: hESC H9

◢ SRX266860: hESC HUES64

◢ SRX266861: hESC HUES64

◢ SRX702107: hESC HUES64

◢ SRX702109: hESC HUES64

◢ SRX20532164: hESC HUES8

◢ SRX20532165: hESC HUES8

◢ SRX5286340: hESC WIBR2

◢ SRX5286341: hESC WIBR2

◣ SRX5286344: hESC WIBR2

◢ SRX10101684: hESC WIBR3

◢ SRX10101685: hESC WIBR3

◢ SRX8026053: hESC WIBR3

◢ SRX8026055: hESC WIBR3

◢ SRX968908: iPSC derived neural cells

◢ SRX968909: iPSC derived neural cells

◢ SRX968910: iPSC derived neural cells

◢ SRX968911: iPSC derived neural cells

◢ SRX968912: iPSC derived neural cells

◢ SRX1813586: iPS cells

◢ SRX1813587: iPS cells

◢ SRX20140858: iPS cells

◢ SRX20140859: iPS cells

◢ SRX512370: iPS cells

◢ SRX6852811: KNS-62

◢ SRX10035162: KYSE-140

◢ SRX10407085: KYSE-70

◢ SRX277131: KYSE-70

◢ SRX6852808: LK-2

◢ SRX6852813: LK-2

◢ SRX6852814: LK-2

◢ SRX026880: LN-229

◢ SRX359955: LoVo

◢ ERX2260038: Lung cancer

◢ ERX2260040: Lung cancer

◢ ERX2260044: Lung cancer

◢ ERX2260046: Lung cancer

◢ SRX2731713: Lung cancer cell line

◢ SRX6750797: MDA-MB-231

◢ SRX6750798: MDA-MB-231

◢ SRX1813580: MRC-5

◢ SRX1813581: MRC-5

◢ SRX1813582: MRC-5

◢ SRX1813583: MRC-5

◢ SRX1813584: MRC-5

◢ SRX1813585: MRC-5

◢ SRX2732210: MRC-5

◢ SRX2732211: MRC-5

◢ SRX5771664: N2102Ep

◢ SRX5771666: N2102Ep

◢ SRX5771668: N2102Ep

◢ SRX11904443: NCI-H1836

◢ SRX11904444: NCI-H1836

◢ SRX6852809: NCI-H520

◢ SRX11904441: NCI-H82

◢ SRX11904442: NCI-H82

◢ SRX10445285: Neural crest cells

◢ SRX10445293: Neural crest cells

◢ SRX10445303: Neural crest cells

◢ SRX10445312: Neural crest cells

◢ SRX20140860: Neural progenitor cells

◢ SRX20140861: Neural progenitor cells

◢ SRX20140862: Neural progenitor cells

◢ SRX20140890: Neural progenitor cells

◢ SRX20140891: Neural progenitor cells

◢ SRX20140892: Neural progenitor cells

◢ SRX5716451: Neural progenitor cells

◢ SRX5716452: Neural progenitor cells

◢ SRX5716453: Neural progenitor cells

◢ SRX330107: ReN-VM

◢ SRX330108: ReN-VM

◢ SRX277134: T.T

◢ SRX3367070: TE-5

◢ SOX2: STRING

TMPRSS11E
NRARP
ZNF483
SOX2
SMARCA2
REST
NTRK2
DPPA5
PIPOX
GOLGA6D
METTL11B
VCAN
TCF7L1
DNMT3B
APOBEC3F
ZSWIM3
ACOT8
CDX2
LEFTY1
FAM222B
ZSCAN2
FGF1
PHC1
SLC7A5
CACHD1
SACS
ETS1
HESX1
LEFTY2
SOX6
LZTS1
ARHGEF38
NES
SLTM
MTF2
RASGRF2
BCOR
FAM227A
CBY1
DUSP6
SRRM4
NRG1
MFSD4B
ANKRD1
SFRP2
FLAD1
TGIF2-RAB5IF
TGIF2
NANOG
POU5F1
DAGLB
DIDO1
GIMAP5
GAD2
SPATA45
ZNF608
NFE2L3
SLC46A1
GOLGA6C
PRICKLE1
PSMD9
HPD
DNMBP
SAMHD1
CD99L2
DEFB114
DEFB113
RMND5B
FZR1
DUX4
VENTX
FRG2C
HES3
ICMT
SHCBP1L
MTHFD1L
DHDDS
APOBEC3D
APOBEC3C
AGO1
NDUFS5
ZNF343
LRRTM4
GOLGA6B
RNASE9
IFRD1
OBI1
HDAC9
ZFHX3
NAV2
TIMP4
HMGB1
E2F7
PTMA
RIIAD1
CELF3
FZD8
RPH3A
DUSP29
CER1
ID3
SLA2
PHF5A
ACO2
CD200
SOCS3
CYP2S1
SORBS2
DDX43
RTBDN
MAST1
OR5AR1
SALL3
FAM180A
GOLGA6A
PF4
PPBP
ALDH1A2
SMCO1
FRG2
BRINP2
ZIC4
ZNF398
TSKS
AP2A1
ZNF532
SUCO
CLDN9
ANP32A
SCGB3A2
SLC2A14
MTRNR2L8
GDF11
KIFBP
CSGALNACT1
LRRN1
EDDM3B
AJAP1
IL34
HES5
PANK4
ARID2
SNRPN
PPP1R16B
NMNAT3
PMEPA1
CANT1
GATA3
FGF2
DDX17
CHMP7
PQBP1
TIMM17B
MTRNR2L1
CDC42EP3
SGMS2
MED25
FUZ
LIPK
ITGB5
VOPP1
ESR1
PNRC1
TDGF1
PCBP1
DDX3X
FGD3
TRIM24
PDZRN4
MUC1
OLFML3
LMCD1
MYSM1
PIP5K1C
MAGEB2
SNURF
CHFR
PAK1
ADGRG7
BTG2
PLPP2
TKT
TRAPPC8
TRIML2
GADD45G
ZCCHC3
ARHGAP42
FOXP1
VCPKMT
TFAP2A
NDUFB5
MRPL47
TALDO1
POSTN
SDCBP
SAMD5
GPSM3
WDR49
TFE3
GNAI2
PRPS1
AKR1D1
ZNF775
ACVR1
GABRB3
RAB4B
MIA
ZNF781
ARSL
SALL4
BEND3
PLEKHG5
EXOC7
MRPL20
WFDC8
PYGM
MICA
CDC14B
ONECUT2
DNAJC25-GNG10
DNAJC25
GRK6
ART3
MAD2L2
TMEM47
EXOSC9
SMAGP
LINGO1
MACROH2A1
ABCC2
SYTL2
TNIP1
MED12
FBP1
RAB17
IL17RD
FAM81B
PXMP4
AASS
AKIRIN2
PDE1B
MMP10
FAM120B
WNT5B
DLL1
TPCN2
GCNT2
DACH2
UTF1
ACOXL
REV3L
TIAM1
PGBD5
RASA1
AHCYL2
RGSL1
ZFC3H1
THAP2
C20orf96
ERBB2
PGAP3
SCAF4
TNRC18
LOC100129484
PLPP3
CHCHD3
NFYC
PITX2
ABCB5
USP7
NUAK1
CDK6
NADK
PDCL
H3C15
H3C14
H2AC19
H2AC18
SNX19
PAG1
FAM24B
TMEFF1
GJA10
ZNF831
FAM200B
HGS
ARL16
DGLUCY
PEAK1
HMG20A
DOK7
HLA-A
CLCF1
EXT1
PRAC2
PRAC1
SHROOM3
ZNF600
ZCCHC12
FBXW11
ISOC2
RNF24
SNX16
LHFPL4
MOV10
FZD2
SYN3
INSM1
PRMT2
CTSF
ESRP1
KCNJ1
ACSL6
PARP1
CCT2
C1orf127
HIP1R
TNRC6A
TES
DOCK5
KCNN2
UNC13B
SINHCAF
SHISA5
PRKAG2
FAM136A
GABRR2
NXN
PREX2
TJP2
KLF7
CAPZB
TEAD4
CELF4
NOTCH1
TUBB
MDC1
CACNA2D1
HOXA1
C7orf57
HOXA2
GRID2
KLHL31
GPRC5B
DPH6
HK2
UQCRH
LRRC41
ETV1
FZD5
CNOT11
TLE1
WASF1
CDC40
RIF1
MDN1
TMC5
GJC1
WDR36
DHX8
LNX1
GPC6
AK4
TRPC4AP
FZD10
GLRB
CBX2
GJA1
ATP6V1G1
STMN1
FZD7
ISL1
BIN2
HRG
LONRF3
GABBR1
ZNF367
ZBTB45
KCNIP4
ISL2
PTX3
MED4
HOXB1
TRIM13
SYNPO2
BCL2L11
NELFCD
GRIN3A
AGFG2
PPP3CC
GCSAM
AKIRIN1
UBTD2
CAV1
ADA2
DNAJC7
NKIRAS2
TNC
MRO
MGAT4C
NXPH2
LRRTM3
NUP160
ANKRD40
RTN4
ASIP
PRDM14
MAST4
MARCKS
SOX5
LIMCH1
KLF3
PITPNM2
TRAPPC3
MAP7D1
HBG2
GCG
SH3BP4
GABRQ
NEBL
PSIP1
C9orf135
UNK
H3-3B
MYT1
TTYH1
CARHSP1
SENP2
TGIF1
NPAS3
MEX3D
MRS2
KDM2B
TBC1D17
AKT1S1
PDIA4
LFNG
GSN
ETV4
NCDN
KIAA0319L
CYP1A1
COL23A1
FGD4
NRCAM
RCN1
FGFR2
USP44
IER5L
CNPY1
FIGNL2
LIN28B
MTRNR2L2
MSH3
DHFR
KMT2B
CYTH2
IQCH
AAGAB
MCCC1
FBXL19
PER2
PLAGL1
FRAT2
AMN1
ITPRIP
BFSP1
GXYLT2
TMCC1
FBXO40
PALM2AKAP2
TRIM2
TRIP4
SNAPC3
HOXD13
HOXD12
CCDC169-SOHLH2
CCDC169
DND1
SLC35A5
ATG3
CRYGB
JPT1
PDPN
SPRY4
ECE1
CEP41
CAPRIN1
RFX4
SOX14
PRR15
SPIC
ECT2
WBP1L
ST18
DHX32
SYT2
VWCE
EEF1A1
CD24
PIN4
DCAF4L1
ZNF436
HMOX1
GDF3
MTM1
DRAXIN
DDR1
ZNF335
PCLAF
ARIH1
L1TD1
WDFY2
GET3
ZSCAN10
FOXD1
KDM2A
WDHD1
SOCS4
SRCIN1
SRSF7
STK31
IFT80
TBC1D16
CHN2
MOG
DENR
TIAM2
ITGB3
RGS3
CCDC130
PUF60
ZNF304
MMACHC
CCDC163
PYCR2
SLC39A8
RBFOX2
PGPEP1
DST
SASH1
PGK1
CAMTA1
C8orf58
DUSP12
ADAR
PTAR1
PLEKHG1
AEBP2
GTF2I
ALDH7A1
TOMM40
LYPD6B
C10orf95
LMNA
OAZ2
NDST1
SHF
EMSY
UGT1A6
UFD1
CDC45
KDM3A
TNFSF8
NDUFV1
LRIG1
CAPN3
PACSIN2
ZNF536
ANK2
CHD6
ZNF296
GEMIN7
CCN2
ABL2
PSME3IP1
VANGL2
RASAL2
NECTIN1
TRIB2
LIN28A
SIX2
TPST2
TCF7L2
MYCL
SLC20A2
ZNF195
ESR2
HES1
TESK2
AASDH
SMAD3
AUH
UBAP2
ZNF875
PRODH
LOC102724788
OSBPL1A
SLC33A1
HHIP
CCL26
MVB12A
KRT8
GLDC
F11R
NDUFAB1
TSPAN14
SLC25A36
ZNF649
FOXO6
NPSR1
PPP2R3A
MSANTD4
DPPA4
SLFN12
ZNF664-RFLNA
ZNF664
CCDC92
BCL9
RPL8
SLC3A2
ZNF565
NTN5
SMIM14
DISP3
SLC23A2
CDH10
TMEM43
DICER1
CHCHD4
NEUROG3
TRPM1
SAPCD2
PXDC1
LIMK2
MUS81
CFL1
VASH2
PRRC2B
LRAT
SOAT1
SPHK1
CDYL
TET3
ESX1
PYGB
ZSCAN9
FAM20A
SLC16A13
ABCC10
FAM153B
OR2T1
EPB41L1
KLF6
TMUB2
MTHFD1
B3GALT5
STOX2
ZNF428
LRRC47
BFAR
ZBTB18
VPS37B
BORCS6
WDR74
CRISPLD1
CFLAR
CFAP20
PDGFA
LRTM1
DTNA
MAP6
KLF5
ACSL1
SORT1
ID1
TNFRSF6B
SELPLG
PIK3R3
BCAT1
INO80D
OGA
CSF2RB
YIPF4
PREP
G3BP1
CNGA1
KRTAP3-1
ETV6
CPT1A
CTNNA1
LRRTM2
ZNF517
GAST
CCDC85A
S100A16
GSAP
GPC4
DPP3
TRMT2A
RANBP1
RMND1
ARMT1
ADAMTS16
ZNF202
SACM1L
PIK3C2A
LRGUK
BBC3
DACT3
RFLNA
PNCK
APOBEC3G
UBQLN4
LAMTOR2
ZNF814
F11
HSPH1
POLB
ZMAT2
CXADR
CELSR3
SYNCRIP
NIPAL1
CTNND2
PIF1
IFI16
GLI2
SAXO1
TACC2
EPHB3
BAHCC1
PTPRN
CD2BP2
DHRS3
ZFP3
TP53
HMGN1
ANAPC15
CSRNP2
YAF2
MRPL18
TOX3
SLAMF1
NWD1
KNTC1
TRDMT1
ADGRL2
PLEKHB1
OSBPL2
SHC3
ERMN
MBOAT2
SDHC
SH3GL3
ESRRA
CATSPERZ
CAAP1
PSME2
GADD45A
CP
MYEOV
PAFAH2
TIAL1
SLCO5A1
PLCH1
LYPLAL1
MEIS2
C22orf39
VEZT
UPF1
FGD6
SPTLC2
MAMDC2
ANKRD6
OR6C3
LLGL1
SLC6A8
RABGAP1L
EMC9
TUT1
CCDC200
SLC25A11
RNF167
SNAP23
EPHA4
STRA6
GALNT8
DCLK1
TLX3
RAB30
YLPM1
PPME1
C2CD3
TMEM107
DDX39A
LEKR1
AIRE
ARID5A
TBC1D23
DPYSL3
TLE3
AFF1
SDCCAG8
PIMREG
CEP170
ABLIM1
PPP1R18
NRM
KLHL24
ST6GAL1
CNMD
IL7R
TSPAN5
ZFYVE1
SPATC1L
TLL2
CCL2
MSL2
RNF43
CTBP2
RAB23
SRP68
NEDD9
ZNF140
SLC10A2
RNF213
TCHP
FOXN3
OCSTAMP
ERGIC2
C1QTNF7
PTPN12
SLC25A16
SYBU
NACAD
CHD7
GUCA1A
HELLS
KRBA2
CNR2
ZBTB40
HSBP1L1
RBM20
DTX2
ITPK1
CTTNBP2NL
ITGB1
NEPRO
JUP
ZFAND3
CCDC33
SFPQ
MIDEAS
TCF4
SP5
COPZ1
CEP63
ANAPC13
RARB
SPATA22
RAD54B
KIAA1522
ARMC12
STK32C
LRRC27
ZNF552
GOLGB1
ZNF627
H4C15
H4C14
AP2B1
SET
PROM1
FAM181A
RAPGEF5
TAGLN3
ZSWIM4
NCOA7
MATR3
PHLDB2
RRAGA
MEF2C
CCDC88C
ETFB
ZDHHC5
LGR6
TP53INP1
RAX
ATG9B
ASH2L
IFIT3
NKX2-2
RPL27
LYPD1
CACNA1S
YEATS2
SPATA12
EGR3
SCOC
ALDH2
TCAF1
THEM4
EP300
NATD1
ERVH48-1
PCDHB8
CCDC167
LCOR
PES1
ROR1
PRND
NARF
ARSG
PCYT1B
KIAA0895L
HEXIM2
CDC25A
TMX2
MED19
PRKCA
NKX1-2
PEA15
PWWP2A
ADRM1
VSIG10
NCBP2AS2
NCBP2
ACCS
GDF5
ZFAND6
RNF19A
DNAJB1
GABPB2
GLIPR2
KRT6B
CUEDC1
RESF1
RBBP9
MTUS1
SEC14L5
ATAT1
TRPM3
PCDHB16
POLDIP3
MDK
GALNT3
ZBTB8OS
RBBP4
PDE4D
RGPD1
ETV5
CMTM4
C1R
FGF4
FAM126A
SPAG9
ENO1
HNRNPDL
ENOPH1
OAT
IGBP1
FSBP
ARHGAP19
CNP
NSA2
GFM2
HBP1
ZFP64
ZNF318
SUFU
ACTR1A
CCDC88A
GBX2
TSNAXIP1
RANBP10
SKIDA1
JAG1
MBNL3
HLTF
ZBTB2
EPB41L4B
EPB41L2
ABCB8
PAN2
IL23A
UHRF1BP1L
MEX3A
WDR44
NR6A1
TIA1
LOC150051
ZNF37A
FAT1
MOSPD3
CDC42EP4
HSPA13
ZFP36L1
ZBTB6
FAM107A