ChIP-Atlas: Target genes

Potential target genes for SOX2

Query protein: SOX2
Distance from TSS: ± 1 kb  ± 5 kb  ± 10 kb
Sort key: SRX6101129 | hESC H9
 
Color legends
  1000 750 500 250 1 0  (Values = Binding scores of MACS2 and STRING)

Download: TSV (text)
Links: Movie and Document for ChIP-Atlas Target Genes
SOX2's Target genes

◢ SOX2: Average

◢ SRX130061: BJ

◢ SRX10407083: Esophageal squamous carcinoma cell line

◢ SRX10407084: Esophageal squamous carcinoma cell line

◢ SRX5286338: ES cells

◢ SRX5286339: ES cells

◢ SRX5286342: ES cells

◢ SRX5286343: ES cells

◢ SRX11904439: H29

◢ SRX11904440: H29

◢ SRX6852812: HCC2814

◢ SRX277137: HCC95

◢ SRX6852810: HCC95

◢ SRX3205373: Head and neck squamous cell carcinoma 

◢ SRX702105: hESC derived mesendodermal cells

◢ SRX702106: hESC derived mesendodermal cells

◢ SRX702108: hESC derived mesendodermal cells

◢ SRX1047416: hESC derived neural cells

◢ SRX11919277: hESC derived neuromesodermal cells

◢ SRX011616: hESC H1

◢ SRX1047413: hESC H9

◢ SRX277140: hESC H9

◢ SRX6101128: hESC H9

◣ SRX6101129: hESC H9

◢ SRX266860: hESC HUES64

◢ SRX266861: hESC HUES64

◢ SRX702107: hESC HUES64

◢ SRX702109: hESC HUES64

◢ SRX20532164: hESC HUES8

◢ SRX20532165: hESC HUES8

◢ SRX5286340: hESC WIBR2

◢ SRX5286341: hESC WIBR2

◢ SRX5286344: hESC WIBR2

◢ SRX10101684: hESC WIBR3

◢ SRX10101685: hESC WIBR3

◢ SRX8026053: hESC WIBR3

◢ SRX8026055: hESC WIBR3

◢ SRX968908: iPSC derived neural cells

◢ SRX968909: iPSC derived neural cells

◢ SRX968910: iPSC derived neural cells

◢ SRX968911: iPSC derived neural cells

◢ SRX968912: iPSC derived neural cells

◢ SRX1813586: iPS cells

◢ SRX1813587: iPS cells

◢ SRX20140858: iPS cells

◢ SRX20140859: iPS cells

◢ SRX512370: iPS cells

◢ SRX6852811: KNS-62

◢ SRX10035162: KYSE-140

◢ SRX10407085: KYSE-70

◢ SRX277131: KYSE-70

◢ SRX6852808: LK-2

◢ SRX6852813: LK-2

◢ SRX6852814: LK-2

◢ SRX026880: LN-229

◢ SRX359955: LoVo

◢ ERX2260038: Lung cancer

◢ ERX2260040: Lung cancer

◢ ERX2260044: Lung cancer

◢ ERX2260046: Lung cancer

◢ SRX2731713: Lung cancer cell line

◢ SRX6750797: MDA-MB-231

◢ SRX6750798: MDA-MB-231

◢ SRX1813580: MRC-5

◢ SRX1813581: MRC-5

◢ SRX1813582: MRC-5

◢ SRX1813583: MRC-5

◢ SRX1813584: MRC-5

◢ SRX1813585: MRC-5

◢ SRX2732210: MRC-5

◢ SRX2732211: MRC-5

◢ SRX5771664: N2102Ep

◢ SRX5771666: N2102Ep

◢ SRX5771668: N2102Ep

◢ SRX11904443: NCI-H1836

◢ SRX11904444: NCI-H1836

◢ SRX6852809: NCI-H520

◢ SRX11904441: NCI-H82

◢ SRX11904442: NCI-H82

◢ SRX10445285: Neural crest cells

◢ SRX10445293: Neural crest cells

◢ SRX10445303: Neural crest cells

◢ SRX10445312: Neural crest cells

◢ SRX20140860: Neural progenitor cells

◢ SRX20140861: Neural progenitor cells

◢ SRX20140862: Neural progenitor cells

◢ SRX20140890: Neural progenitor cells

◢ SRX20140891: Neural progenitor cells

◢ SRX20140892: Neural progenitor cells

◢ SRX5716451: Neural progenitor cells

◢ SRX5716452: Neural progenitor cells

◢ SRX5716453: Neural progenitor cells

◢ SRX330107: ReN-VM

◢ SRX330108: ReN-VM

◢ SRX277134: T.T

◢ SRX3367070: TE-5

◢ SOX2: STRING

SMARCA2
DPPA5
GDF11
ZNF483
TMPRSS11E
SOX6
ZNF343
TRIP4
PCLAF
REST
SPIC
RIF1
MED12
UGT1A6
ARHGEF38
JPT1
OBI1
NRG1
ESR2
FBXW11
FAM222B
DND1
NCDN
KIAA0319L
MTF2
CD99L2
CELF4
FAM200B
KLF5
UBAP2
SOAT1
SLC35A5
ATG3
CMTM4
ZSWIM3
ACOT8
MSL2
ITGB3
NADK
PUF60
RMND5B
TNFSF8
ZBTB18
SPTLC2
MFSD4B
TIAM2
MRPL20
MRPL18
PNLDC1
TUBB4A
NDUFV1
BIN2
DDX43
MYSM1
SLA2
CFLAR
PRICKLE1
RPL8
ZNF517
SLC23A2
PROM1
BTG2
SAMHD1
APOBEC3F
UTF1
ANKRD1
AIRE
EVA1B
AGO1
TRIM2
ETS1
SPATA45
VSIG10
NES
TALDO1
C10orf95
OAT
SLC16A10
ABCC10
DUSP12
PCLO
IER5L
CCDC130
WDHD1
SOCS4
MBOAT2
PALM2AKAP2
ABL2
ZNF696
LDAH
SCHIP1
CNR2
PRDM14
MT1E
FLAD1
ZFP3
MBNL2
NDUFAB1
GSN
MRS2
APOBEC3G
PRODH
LOC102724788
SNAPC3
ZNF398
SCGB1D1
MTHFD1L
GLDC
BFAR
HOXD13
HOXD12
CRYGB
ATG9B
ABCB8
SRSF12
YIPF4
ATAD3B
SNX19
RASGRF2
FGD4
UNC13B
LRRTM4
PARP1
SNRPN
NLRP7
PMEPA1
SOX5
ZNF552
PTAR1
DDX39A
TDGF1
UPP1
PDCL
RMND1
ARMT1
GABRQ
MOG
ZNF318
SLC2A11
TFAP2C
PTPRN
MMACHC
CCDC163
PDCD7
CCDC169-SOHLH2
CCDC169
PRKAA1
FAM20A
TMC5
SHCBP1L
ZFP64
TRAPPC8
RCN1
LARP1
FRAT2
SFRP2
RASA1
ZCCHC4
SDHC
ZNF875
GINS3
CSAD
ZNF740
ARRDC2
GNAI2
KRBA2
SH2D4B
TET3
AGL
FAM227A
CBY1
SLC35F6
DERA
CACNA2D1
OR6C3
PRAMEF17
ARHGAP19
TMEM229B
RNASE10
GAST
BCOR
KRT82
ATG5
PHC1
ITGB5
ID3
RASSF8
HLA-F
ZNF469
ZNF729
SLCO4C1
AP2B1
PMS2
AIMP2
SLC25A16
LHFPL5
CLPS
PRRC2B
ZNF532
GALNT8
TPCN2
NCBP2AS2
NCBP2
DTD1
CNGA1
NIPAL1
PTPN12
SOX2
ASH2L
DENR
KIFBP
IFRD1
SYN3
ZNF460
CATIP
ZNF565
MGLL
ZSCAN10
PITPNM2
CNOT11
PRPS1
SESTD1
BRDT
WDR25
WARS1
ZNF335
PEAK1
HMG20A
NPSR1
FUBP1
DNAJB4
SLC7A7
RTP3
SAPCD2
UAP1L1
LRRC74A
MRGPRX3
NTAQ1
TRIM22
TRIM5
TAF13
OR1E3
VANGL2
C1R
PIN4
DLX6
NFKB2
AASS
SLC35G4
RPUSD3
PYGB
FAM107A
LIPK
TRIML2
HCAR2
FBXO40
MVB12A
MROH7
PNCK
SLC6A8
FOXP1
GJA10
C19orf25
SLTM
DCAF4L1
SLC30A9
ZNF649
TP53
LRTM2
FZD8
PSORS1C2
PINK1
CCDC85A
IQCF2
IL34
DEFB124
EXT1
SNAP23
NEPRO
TBL1XR1
ALDH1A2
VIT
ZNF385B
MYRFL
AKIRIN2
GRAP2
STMN2
YAF2
ZNF90
RNF212B
OR6S1
FGFR3
SRRM4
TULP4
GIMAP5
SALL3
LEFTY2
ADAR
S100A16
ST18
RFC4
ATMIN
GUCA1A
THOC2
ZCCHC3
MS4A12
PRDX3
SULT1B1
ELP6
CLDN9
KRT8
RAB3GAP1
FASTKD1
SLC3A2
RIMKLB
DISP3
FGF4
NOTCH1
DNMBP
GJA1
F11
PCDHGB2
PCDHGA5
IHH
SMAGP
SPRY2
COL26A1
GLIPR2
TBC1D1
PPP1R2
LRRC47
KHDC1L
CEP85L
SHISA5
FEZ2
L1TD1
SLC35G5
ZMAT2
OR6J1
DAGLB
ADA2
AHCYL2
RIIAD1
CELF3
SLC2A14
CYP1A1
MACROH2A1
SET
STX18
CHMP7
LCA5
PRKAR1A
LINGO1
RMDN2
GAD2
SPATA4
GP5
GDF3
C8orf58
ZNF781
PPP1R3B
OR5AR1
TRIM24
HDAC9
FOXN3
ZC3H12B
RTN4
CDYL
CLPP
CHI3L2
DNTT
GOLGA6D
FAM193B
AK4
SLC38A9
IGFALS
BCKDK
DUSP6
CCDC60
ACOT6
APOBEC3D
APOBEC3C
SDCBP
CAPN3
SLC35E4
FZD5
CCDC200
DEFB107B
DEFB107A
HLA-DRB5
CAAP1
DUSP29
SOX4
FAM169A
ZNF281
NCOA7
NEB
PSRC1
INSM1
STMN1
CSPP1
CLEC2L
PRR15
ZMIZ2
SLFN12
CCNT1
TEX49
SPAG5
ARHGAP42
IFT80
CTNNA3
MARCHF8
MED15
ACYP2
PSME4
MPI
LPCAT4
LYPD6B
TACC2
AMOTL2
MAPRE3
DEFB108B
PRKAG2
CCL2
ACBD7
HOXB2
SYT2
ETV4
MX2
CCR8
XBP1
OMP
CACHD1
BEND3
C22orf39
ATP9B
HLA-DRB1
DPPA2
PGBD2
NR6A1
SNURF
RPL11
LDLRAD1
ZSCAN2
HYAL1
NFE2L3
ADCK1
ZNF600
DUSP8
DPH6
GNAL
TMEM202
TSKS
AP2A1
FGFR2
TRIM13
TMEM150C
SERPINB6
SRPK2
TTC5
ZNF664-RFLNA
ZNF664
CCDC92
OR8B3
ETV1
CEP41
ATP6V1G1
HYOU1
PRR13
SSH1
DUSP16
SLC35G3
ARL13A
MAD2L2
DRAXIN
FERMT1
FZR1
RPGRIP1L
FTO
HES2
ESPN
METTL16
FLVCR2
SELENOV
TRIM60
DDX3X
PXDC1
ATP6AP2
SCAPER
ZNF584
EMSY
TRAF3
ZNF624
AUH
CLEC9A
SEPHS2
GAS6
VN1R4
SEC22B
BLOC1S4
SRCIN1
LGR6
GSAP
GPR1
FBP1
COX8C
GTF2A1L
ZNF432
SHPK
CTNS
CA13
TGIF2-RAB5IF
TGIF2
AASDH
ZNF140
NECTIN4
MTRNR2L1
C2
FOXE1
ORC2
CKAP5
PPP2R5A
ZFP42
IFNE
SUCO
EPB41L1
NANOG
ADAMTS16
DUX4
SGMS2
CDX2
NACAD
THEM4
ZNF566
POM121
SPDYE7P
SEC63
RAPH1
CD101
LRIG1
PPP2R3A
ANKDD1B
TAGLN3
SLC35A2
HSBP1L1
VENTX
IFITM3
IFITM1
PCBP1
KIF11
PUS1
ZNF296
GEMIN7
SNX16
RUNX1T1
CD200
CACNB2
KRTAP21-3
NDUFAF3
DALRD3
PNISR
SLC25A18
WDFY2
OLAH
YWHAE
ESX1
DCLK1
E4F1
PGP
ZNF814
OAZ3
CREBL2
NKX1-2
ZNF260
H3-2
TCF7L1
ZNF436
SELENOT
ASIP
SAXO1
BIRC6
TAX1BP1
RBM5
NUP205
GXYLT2
RAB40AL
TM4SF1
TRIM64B
PRSS41
UHRF1BP1
POGLUT2
LRGUK
NARF
TMX2
MED19
RESF1
CYBC1
CRYZL2P-SEC16B
TMEM263
FRG2C
SENP2
CCDC69
IFI16
ACOXL
PEA15
USP44
SH3PXD2B
DGLUCY
HEY2
HEXIM1
RUFY1
GXYLT1
RBAK-RBAKDN
RBAK
CAPRIN1
VPS37C
C5orf34
DLAT
SOCS3
ACSBG2
PDE4C
SPDYE21
TRPC4AP
PPARG
GBP1
EEPD1
C8G
LCN12
FBXW5
MRPS36
FARSB
NAV2
EXOSC9
SCGB3A2
TBC1D23
RBM41
IGSF1
KDM2B
SERINC5
SLC6A12
EML2
CSNK1D
CFAP410
OR7D2
HESX1
LMAN2L
MRPS7
GGA3
FBXL19
OLFML3
ERVH48-1
FANK1
TUBB
MDC1
ZNF37A
ITFG2
OVOL2
EEA1
EIF4EBP2
C5orf60
LGALS4
CDH10
TRIT1
VAMP1
REX1BD
NBPF9
NCR1
UBE4B
TMEM160
ZNF429
SLAMF1
THRA
H3C15
H3C14
H2AC19
H2AC18
CD300LB
HEG1
SLC20A2
SMARCB1
SLC2A3
PLAC8
ATG7
PSME3IP1
HNRNPL
OR10AD1
ATP5F1E
CABP1
MRPS5
ZNF878
PRMT2
RPL32
SERF2
ELF2
ELL3
CHCHD3
PDHB
POM121C
SPDYE5
NNT
CLIC4
RUFY3
NPAS3
GCSAML
ECE1
GNA12
EPB41L4B
ETNK2
AARS2
ZC3H4
NRBF2
ZNF777
IQCF1
TGIF1
CAMKV
CDK17
AADACL3
TSSK4
ERBB3
CENPS-CORT
CENPS
CLEC4A
PRPF8
SUCLA2
NFYC
SOX14
GCNT2
COLEC11
OR14I1
SACS
NECTIN1
H3C13
H2BC18
SORBS1
PLAGL1
SRSF7
VSNL1
VMO1
GLTPD2
PGAP6
VPS35
GADD45G
GPRC5B
RAP1A
LIN28A
CALD1
CNMD
TRIM38
MTA2
GEMIN2
TMEM68
TGS1
HACD2
SYK
UBQLN1
IL4R
LZTS1
CPSF4L
EEF2
SUPT6H
SDF2
PCDHA10
SPANXC
NIT2
LPCAT3
OR2G2
TLR1
REXO4
ADAMTS13
CLEC7A
PAQR3
F11R
CDC25A
ZIC4
TSKU
MIER2
SH3BP4
PLPP3
LHB
HES3
ICMT
PLEKHA3
FKBP7
GGTLC3
ZNF608
RBBP9
IGF1
LACTBL1
ANK3
NF2
S100A13
GAB2
CCDC83
POF1B
PRSS47
S100A1
ESRP1
CLDN20
TNFAIP8L1
CCDC167
MRPS23
LONP1
CATSPERD
HSP90AA1
WDR20
FOXB1
BTG1
ALAD
YBEY
MCM3AP
GRK6
ZNF329
PRAC2
PRAC1
PHLDB2
PRND
CPB2
HSPH1
PLSCR4
C14orf180
NATD1
ECT2
PPA1
EFR3B
FOXR1
IQGAP2
CCS
CCDC87
PPP1R8
RAB7A
FIG4
AK9
TBCD
GPD2
SOX13
KCNT2
GLS2
ZNF114
PCSK1
INPP5F
CHFR
DDR1
SNX30
MPPE1
FUS
SOHLH2
C17orf98
NCALD
PTHLH
CHD1L
TMEM50A
PRDM1
SLC41A3
ANXA3
POU5F1
CTSF
CLEC12A
SLC7A5
CYTH2
JAM3
GFRA4
LEMD2
STK38
SH2D5
TTC23L
MSLN
MYOCOS
RPS10-NUDT3
RPS10
GPR146
ZNF701
LYPD1
MRPL48
CYB561
WDR36
RNASEH1
DNAJC28
LAIR1
LRRN1
GOLGA6B
MAP6
KIAA0895L
TSTD2
NCBP1
DHRS3
RAD54B
FSBP
WDR44
KBTBD6
LINGO4
SPART
KLHL12
SIRT2
NFKBIB
ATF6
TMCC1
RORC
ZNF662
SLC12A3
DES
GGTLC2
XPO5
POLH
TRAP1
TMEM107
TDRP
ONECUT2
CEP78
LLPH
GOLGA6C
SLC39A8
TMEM109
PADI6
PRR23D2
PRR23D1
MYLPF
EID3
ZNF48
LGALS12
GLT1D1
FAM122C
NTN5
SVOPL
TMEM167B
DLG3
ITPRIPL2
KDM4E
TJP2
ABCF3
GABRR2
IGSF9
SLC36A1
UACA
CHMP5
BAG1
ARSL
LAMC1
PALB2
DCTN5
LPP
MX1
PRLHR
LAX1
GUCA1B
CCNDBP1
PDGFA
PPARGC1B
MS4A1
GREM2
KCNH5
CLYBL
RAB14
DNMT3L
MAGEB2
ENO1
CDC42EP4
GCGR
SRGAP1
ZNF200
PNKD
ZNF614
CNTRL
C5
AAMP
ATP12A
SCAF4
RNASE9
GALNT3
TXLNG
DUSP13
BCL2L1
RIN2
EFHC1
S100P
RFT1
SLC6A15
LYPLA1
MRPL52
VPS37B
MAGEB17
MRPS15
PIGK
PRAMEF10
RCOR1
H2BC15
H2AC15
LOC100289561
SPDYE6
RALGDS
THOC5
TIMM50
ZFP36L1
H1-7
CMYA5
PLEKHM2
FOLR3
LEFTY1
KLF7
PHF19
ZNF341