ChIP-Atlas: Target genes

Potential target genes for SOX2

Query protein: SOX2
Distance from TSS: ± 1 kb  ± 5 kb  ± 10 kb
Sort key: SRX20532164 | hESC HUES8
 
Color legends
  1000 750 500 250 1 0  (Values = Binding scores of MACS2 and STRING)

Download: TSV (text)
Links: Movie and Document for ChIP-Atlas Target Genes
SOX2's Target genes

◢ SOX2: Average

◢ SRX130061: BJ

◢ SRX10407083: Esophageal squamous carcinoma cell line

◢ SRX10407084: Esophageal squamous carcinoma cell line

◢ SRX5286338: ES cells

◢ SRX5286339: ES cells

◢ SRX5286342: ES cells

◢ SRX5286343: ES cells

◢ SRX11904439: H29

◢ SRX11904440: H29

◢ SRX6852812: HCC2814

◢ SRX277137: HCC95

◢ SRX6852810: HCC95

◢ SRX3205373: Head and neck squamous cell carcinoma 

◢ SRX702105: hESC derived mesendodermal cells

◢ SRX702106: hESC derived mesendodermal cells

◢ SRX702108: hESC derived mesendodermal cells

◢ SRX1047416: hESC derived neural cells

◢ SRX11919277: hESC derived neuromesodermal cells

◢ SRX011616: hESC H1

◢ SRX1047413: hESC H9

◢ SRX277140: hESC H9

◢ SRX6101128: hESC H9

◢ SRX6101129: hESC H9

◢ SRX266860: hESC HUES64

◢ SRX266861: hESC HUES64

◢ SRX702107: hESC HUES64

◢ SRX702109: hESC HUES64

◣ SRX20532164: hESC HUES8

◢ SRX20532165: hESC HUES8

◢ SRX5286340: hESC WIBR2

◢ SRX5286341: hESC WIBR2

◢ SRX5286344: hESC WIBR2

◢ SRX10101684: hESC WIBR3

◢ SRX10101685: hESC WIBR3

◢ SRX8026053: hESC WIBR3

◢ SRX8026055: hESC WIBR3

◢ SRX968908: iPSC derived neural cells

◢ SRX968909: iPSC derived neural cells

◢ SRX968910: iPSC derived neural cells

◢ SRX968911: iPSC derived neural cells

◢ SRX968912: iPSC derived neural cells

◢ SRX1813586: iPS cells

◢ SRX1813587: iPS cells

◢ SRX20140858: iPS cells

◢ SRX20140859: iPS cells

◢ SRX512370: iPS cells

◢ SRX6852811: KNS-62

◢ SRX10035162: KYSE-140

◢ SRX10407085: KYSE-70

◢ SRX277131: KYSE-70

◢ SRX6852808: LK-2

◢ SRX6852813: LK-2

◢ SRX6852814: LK-2

◢ SRX026880: LN-229

◢ SRX359955: LoVo

◢ ERX2260038: Lung cancer

◢ ERX2260040: Lung cancer

◢ ERX2260044: Lung cancer

◢ ERX2260046: Lung cancer

◢ SRX2731713: Lung cancer cell line

◢ SRX6750797: MDA-MB-231

◢ SRX6750798: MDA-MB-231

◢ SRX1813580: MRC-5

◢ SRX1813581: MRC-5

◢ SRX1813582: MRC-5

◢ SRX1813583: MRC-5

◢ SRX1813584: MRC-5

◢ SRX1813585: MRC-5

◢ SRX2732210: MRC-5

◢ SRX2732211: MRC-5

◢ SRX5771664: N2102Ep

◢ SRX5771666: N2102Ep

◢ SRX5771668: N2102Ep

◢ SRX11904443: NCI-H1836

◢ SRX11904444: NCI-H1836

◢ SRX6852809: NCI-H520

◢ SRX11904441: NCI-H82

◢ SRX11904442: NCI-H82

◢ SRX10445285: Neural crest cells

◢ SRX10445293: Neural crest cells

◢ SRX10445303: Neural crest cells

◢ SRX10445312: Neural crest cells

◢ SRX20140860: Neural progenitor cells

◢ SRX20140861: Neural progenitor cells

◢ SRX20140862: Neural progenitor cells

◢ SRX20140890: Neural progenitor cells

◢ SRX20140891: Neural progenitor cells

◢ SRX20140892: Neural progenitor cells

◢ SRX5716451: Neural progenitor cells

◢ SRX5716452: Neural progenitor cells

◢ SRX5716453: Neural progenitor cells

◢ SRX330107: ReN-VM

◢ SRX330108: ReN-VM

◢ SRX277134: T.T

◢ SRX3367070: TE-5

◢ SOX2: STRING

NRARP
GOLGA6D
POU5F1
SRRM4
FRG2C
DNMBP
CLDN9
NES
LFNG
ID3
MTF2
CDX2
MUC1
GOLGA6B
TCF7L1
EEF1A1
SOX2
PF4
PPBP
SMARCA2
NANOG
SACS
PIPOX
AGO1
PLPP2
FRG2
GOLGA6A
FGF1
GOLGA6C
DUX4
RMND5B
PRICKLE1
SHISA5
REST
FAM227A
CBY1
SOX6
GNAI2
NADK
ZNF483
GAD2
FBXO40
FGF2
HMGB1
CARHSP1
NFE2L3
ARHGEF38
SFRP2
TLE1
PTMA
SPATA45
UTF1
DPPA5
ANKRD1
DUSP6
CDC14B
TMEFF1
NEUROG3
CYTH2
TES
APOBEC3D
APOBEC3C
SCGB3A2
TGIF2-RAB5IF
TGIF2
CNPY1
FOXD1
FAM120B
DLL1
ETS1
WNT5B
SNRPN
OBI1
GPRC5B
DDX17
ESRP1
ZNF536
PHC1
ZNF398
GIMAP5
CACHD1
SOX5
RPH3A
CD99L2
NAV2
ZNF775
TALDO1
IER5L
RIF1
MDN1
ZSCAN2
PARP1
LZTS1
NCDN
KIAA0319L
MEX3D
NDUFB5
MRPL47
LEFTY1
PMEPA1
NTRK2
PCBP1
EDDM3B
MLLT6
IQCH
AAGAB
ZNF532
TRIM13
SGMS2
BTG2
KCNN2
DDX3X
CDH10
ISOC2
ZNF649
LIN28B
TRIML2
SAMHD1
FZR1
HGS
ARL16
LRRTM3
MAD2L2
SHCBP1L
MRS2
TRIM24
SACM1L
C20orf96
METTL11B
LIN28A
GPSM3
ZBTB45
FBP1
CER1
ARID2
DPH6
HMGN1
ZFHX3
GTF2I
AASS
SMIM14
PHF5A
ACO2
L1TD1
GADD45G
PDGFA
FBXL19
POSTN
GCNT2
FAM24B
CRYBB1
HDAC9
USP7
TFE3
USP44
IL17RD
SNAPC3
SINHCAF
ZSWIM3
ACOT8
GLB1L3
ZFC3H1
THAP2
PODXL
FAT1
LRRN1
PRAC2
PRAC1
FGD4
ONECUT2
TFAP2A
VANGL2
GDF3
PCDHB5
RIIAD1
CELF3
RFX4
DDX43
BCOR
SNURF
ESX1
CHFR
SAMD5
KMT2B
HOXD13
HOXD12
SCAF4
DRAXIN
AHCYL2
TACC2
LINGO1
PREX2
SENP2
PSMD9
HPD
SLTM
STOX2
TKT
CAPZB
PRDM14
HMOX1
SALL3
CNMD
TJP2
NOTCH1
MEIS2
IGDCC3
SOX14
SRCIN1
TRAPPC8
TMPRSS11E
SOCS3
FGFR2
AKIRIN2
SLC2A14
BORCS6
CEP41
FAM180A
ZNF304
MOG
CCDC169-SOHLH2
CCDC169
DPPA4
ZNF506
FAM110D
GRK6
SLFN12
AEBP2
LRRC47
MFSD4B
ZNF202
MARCKS
ERBB2
PGAP3
RNF213
AJAP1
ETV4
IL34
RTBDN
MAST1
ZNF484
HSPA13
HNRNPU
ZNF664-RFLNA
ZNF664
CCDC92
ID1
AFF1
NRG1
A2ML1
TSKS
AP2A1
SLC46A1
SLCO5A1
JMJD1C
SLC25A36
BBC3
RIPK4
KCNJ1
PRKAG2
ARIH1
TDGF1
SRSF7
ISL2
TSPAN5
MDK
HES3
ICMT
DISP3
IFI16
ARHGEF19
TRAK2
STRADB
BRINP2
UBQLN4
LAMTOR2
GSAP
GABRB3
KLF7
ZNF608
E2F7
F11
SMCO1
PDPN
ZNF296
GEMIN7
OR5F1
LEFTY2
ADA2
SLC39A8
DIDO1
ZBTB8OS
RBBP4
BEND3
CELF4
HESX1
DAGLB
ZNF781
CCN2
CHMP7
SP9
GJA1
DCAF4L1
EXOC7
DEFB114
DEFB113
CDH6
CAPRIN1
RAB17
KBTBD2
VASH2
PSIP1
TUBB
MDC1
PGBD5
MED25
FUZ
ZSCAN10
PLPP3
SH2D3C
PNCK
SLC6A8
PDP1
ALDH7A1
C7orf57
SLC16A13
TNRC6A
ADD2
C6orf132
ZEB2
PTPN9
FOXO6
PLCG1
PDIA4
CNOT11
POLB
MVB12A
PAG1
MUS81
CFL1
CPT1A
FERMT1
LITAF
MTRNR2L1
CD24
BRINP1
ACVR1
ETV1
KIFBP
PDCL
GSTT2B
GSTT2
SPRY4
CCT2
AFAP1
LOC389199
AASDH
GABRQ
NOG
RASA1
OAZ2
EP300
COL23A1
GRIN3A
LIPK
HEY2
RASGRF2
CD200
HEBP2
HDAC2
TMUB2
C1orf127
HBP1
FAM222B
GRID2
MYSM1
SMAD3
CYP1A1
FZD8
PDE1B
TSNAXIP1
RANBP10
FAM153B
QSER1
CASP12
TNRC18
LOC100129484
TESK2
ARID5A
VOPP1
HES6
ZNF428
ZNF627
KDM2B
CSRNP2
ARSD
ZIC5
SNX27
FBXW11
SYNCRIP
ZNF140
NFIX
ANAPC15
ESR1
PPP1R16B
SIX2
TUT7
COX20
IFRD1
AMOTL2
ASMTL
ITGB5
TRMT2A
RANBP1
SET
HNRNPDL
ENOPH1
OR7D2
NUP160
CTTNBP2NL
CHCHD3
PLAGL1
AMN1
TBC1D16
MSANTD4
LRIG1
FOS
CFAP20
VCAN
TIAL1
ZDHHC5
SLC16A12
SYNDIG1L
CTBS
UNK
H3-3B
KLF3
RBP1
VENTX
FZD5
PAK1
KANSL1L
PBX1
EBF3
MRPL20
TCAF1
RPSA
IGSF9
ADRM1
ANK2
DPP3
TRIM38
CDK5R1
ZNF576
IRGQ
BBS7
TRIB1
YEATS2
CYP2S1
SALL4
TCHP
CCDC124
TMC5
DTX2
ZFAND6
SLAMF1
CDH9
WBP11
C12orf60
KXD1
SDCCAG8
CEP170
SMARCB1
EPHA2
SPRR2F
RNASE9
ADAMTS16
RAPGEF2
DDR1
TMEM43
CHCHD4
GPBP1
FAM98A
CHD6
TSPAN14
TAX1BP3
EMC6
LBP
SCRT1
PPP1R18
NRM
TFAP2C
HBG2
VGF
CLCC1
SFRP1
SASH1
OTX1
ZFAND3
PTPRK
TRIM2
GET3
RGS3
POLR3G
MBLAC2
PER2
DHX32
RAD54B
FSBP
GID4
ATPAF2
CTH
NELFCD
SLC24A3
LDB1
UBD
PACSIN3
SH3GL3
ESRRA
CATSPERZ
SEPHS1
LRRTM4
PLCH1
LGR6
PES1
TCN2
DLX5
ZNF121
IP6K2
ARAP3
BCL9
S100A16
GATA3
GPT2
PPME1
C2CD3
NASP
MAPKAPK2
ATP6V1G1
ZBTB6
PTX3
PDHA2
OR5AR1
OGA
ZIC4
RRBP1
ZIC1
FOXP1
WDFY2
INSM1
CCDC88C
RARG
N4BP2L2
POLR3E
PLAAT3
GADD45A
SP8
SKIL
ANO1
LRGUK
PLEKHG5
HK2
USP53
LRP8
FZD2
CAPN3
NECTIN1
TEAD4
DAAM1
RORB
WASF1
CDC40
ZNF763
TIMP4
TPST2
DMRT1
CAMKV
ETV6
ITGB1
ZSWIM4
CYP4F11
PPP2R3A
OLFM2
AKR1D1
MYCN
ZMIZ1
MMACHC
CCDC163
CELSR3
CMAS
NIN
ZNF195
HOXB1
NARF
EXOC5
AP5M1
FZD10
MIDN
FAM76B
CEP57
PEX11G
MACROH2A1
APOBEC3F
TCF7L2
FOXN3
NEUROG1
UNC13B
STRA6
INKA2
HRG
KLKB1
TRPM3
YWHAQ
RSF1
AAMDC
SCD5
GDF11
AK4
ZCCHC3
ATAT1
SPAG4
CCNG2
RAB5C
CHRNA5
SBK1
FGD3
DHX8
TNFRSF21
CBX1
LIMCH1
HECW1
ADNP
LMCD1
MCCC1
SYN3
SKIDA1
SYNPO2
KLRC1
MLLT10
ST18
AUH
EIF1AX
ANKRD66
USP37
CNOT9
LLGL1
GUCA1A
ARF4
RBBP6
JARID2
GNAS
RPUSD4
FAM118B
KIF3C
SCD
OLFML3
NXPH2
TNPO1
TMEM44
ZBTB26
CCDC146
KNTC1
UQCRQ
GDF9
SPAAR
EPHA1
GALNT8
RAB30
ROR1
MTRNR2L8
C10orf95
SVOPL
TSSK4
RND2
PRKCA
CCDC88A
C9orf135
ZNF3
CABYR
HNRNPAB
VRTN
DUSP29
LGALS12
ZNF606
CHN2
HLTF
SALL2
CPVL
MUC3A
ATXN3
SERPINH1
SUFU
ACTR1A
GSPT2
THBS2
DGLUCY
DCLK1
NMNAT3
LRFN3
RPL23A
RAB34
DUSP16
FRAT2
TTYH1
TBC1D17
AKT1S1
ZFHX2
THTPA
WBP1L
WDR49
ACSL1
ZNF43
IQSEC2
KCNN1
VEZT
FGD6
TRAPPC3
MAP7D1
ZNF197
PRDM2
SEC22C
SS18L2
EMSY
SPRING1
RNFT2
FLAD1
C8orf58
ADGRA1
NR4A3
QPRT
SESN2
NFYC
TEX46
TMEM132A
KDM1A
YWHAZ
RBM17
SPINDOC
SHROOM3
IREB2
ZNF85
NCL
KEAP1
RPL27
ELOVL5
PIM1
RUNX1T1
GTPBP6
RAB15
ZNF101
ATP13A1
NR2F1
PILRA
PTPN2
ABCB5
ZNF358
FAM81B
OTUD5
LMNA
MEX3A
NKIRAS1
RPL15
SLC2A4
PLEKHG2
SRSF6
PDCD2
ISYNA1
LPIN1
TRPM1
PAXBP1
ATOH1
ZNF135
MTM1
TTC13
CELSR1
TOMM40
LPCAT4
METTL7A
TAL1
PSME2
EMC9
MOSPD3
NOL4
TDRP
PLA2G3
CBX2
MMD
GLDC
CCND3
TAF8
CHCHD10
CCP110
ARHGAP42
NOSTRIN
ESR2
MTHFD1
CD2BP2
MRPS23
PHF19
CAVIN3
SC5D
JADE1
VIPR2
LYPD6B
STK32C
LRRC27
KDM5B
DAZAP1
CCDC85A
DPYSL3
FILIP1L
CALD1
SLC4A2
CDK5
ZNF589
PTPRR
FN1
DNAH2
ID2
ZNF469
DPPA2
MIA3
ACTL6B
CNNM4
MYD88
ACAA1
PIMREG
ZFP36L1
GPR137
ABI2
HSPB7
SOGA1
ERGIC2
ADGRL1
GSG1
PRR15
SUCO
GAST
TLX3
EGR3
RAB4B
MIA
NOTCH3
PBK
ZNF528
IPO11
FBXO46
MEIOSIN
PGM2L1
KCNJ15
TFAP2D
RPL17-C18orf32
RPL17
C18orf32
TRIM71
RTN4
PNRC1
DHRS3
SDCBP
UBE2T
HAS3
CLDN23
PRSS16
ZSCAN9
FBLN1
PJA2
PALM2AKAP2
CDYL
INO80D
ZNF518B
BDH1
RAD23B
STEAP3
WDHD1
SOCS4
DOK7
TSGA10IP
DNM1L
PTP4A1
GSK3A
ZNRF1
KCNIP4
DACT3
TUT1
HELLS
SRPRA
HOXA11
SAPCD2
RABGAP1L
H2AZ2
DCSTAMP
HECTD4
CSRP2
PSME3IP1
KRT8
DNAJC7
NKIRAS2
LEKR1
KLHL24
ST6GAL1
RSPRY1
PRODH2
REEP6
PCSK4
PDZK1IP1
MXD1
ZNF708
CDH7
DDHD1
TP53BP2
HERC2
VSNL1
RAB3GAP2
ZNF300
JAG1
KLHL5
HOXA1
PTCD2
MRPS27
C1orf100
SLX4IP
MKKS
RBMS2
TNFSF8
SHC3
H4C15
H4C14
SCOC
PWWP2A
EMD
ASF1A
CDKL1
DNMT3B
GALNT3
PHC2
KMT5A
ZNF8
E2F1
PPARGC1B
PSKH2
MYH2
CENPF
ANKRD9
PACSIN2
MBNL2
XAB2
PCP2
CHMP4B
SLC35B4
TP53I11
TOX2
SLC33A1
ERVH48-1
STAU2
DDX20
RIOX1
GJC1
IRX5
CRNDE
TEX19
TIAM2
CACNB2
DYNLL1
TEAD2
DKKL1
RBM6
EMC3
PXDC1
TRIM39
DMTN
PROSER1
NHLRC3
VASP
KDM2A
GOLGB1
DLX6
ACYP2
HNRNPUL1
TSPAN13
PSME4
OXNAD1
DPH3
BAZ1B
ZBTB8B
ZNF180
ZNF416
MAPK8
GAS1
ZIK1
ZNF697
GTF2IRD1
STMN1
TCF4
NKX2-2
RAD18
YWHAG
RPA2
UCHL5
RO60
UGT2B4