ChIP-Atlas: Target genes

Potential target genes for SOX2

Query protein: SOX2
Distance from TSS: ± 1 kb  ± 5 kb  ± 10 kb
Sort key: SRX3205373 | Head and neck squamous cell carcinoma
 
Color legends
  1000 750 500 250 1 0  (Values = Binding scores of MACS2 and STRING)

Download: TSV (text)
Links: Movie and Document for ChIP-Atlas Target Genes
SOX2's Target genes

◢ SOX2: Average

◢ SRX130061: BJ

◢ SRX10407083: Esophageal squamous carcinoma cell line

◢ SRX10407084: Esophageal squamous carcinoma cell line

◢ SRX5286338: ES cells

◢ SRX5286339: ES cells

◢ SRX5286342: ES cells

◢ SRX5286343: ES cells

◢ SRX11904439: H29

◢ SRX11904440: H29

◢ SRX6852812: HCC2814

◢ SRX277137: HCC95

◢ SRX6852810: HCC95

◣ SRX3205373: Head and neck squamous cell carcinoma 

◢ SRX702105: hESC derived mesendodermal cells

◢ SRX702106: hESC derived mesendodermal cells

◢ SRX702108: hESC derived mesendodermal cells

◢ SRX1047416: hESC derived neural cells

◢ SRX11919277: hESC derived neuromesodermal cells

◢ SRX011616: hESC H1

◢ SRX1047413: hESC H9

◢ SRX277140: hESC H9

◢ SRX6101128: hESC H9

◢ SRX6101129: hESC H9

◢ SRX266860: hESC HUES64

◢ SRX266861: hESC HUES64

◢ SRX702107: hESC HUES64

◢ SRX702109: hESC HUES64

◢ SRX20532164: hESC HUES8

◢ SRX20532165: hESC HUES8

◢ SRX5286340: hESC WIBR2

◢ SRX5286341: hESC WIBR2

◢ SRX5286344: hESC WIBR2

◢ SRX10101684: hESC WIBR3

◢ SRX10101685: hESC WIBR3

◢ SRX8026053: hESC WIBR3

◢ SRX8026055: hESC WIBR3

◢ SRX968908: iPSC derived neural cells

◢ SRX968909: iPSC derived neural cells

◢ SRX968910: iPSC derived neural cells

◢ SRX968911: iPSC derived neural cells

◢ SRX968912: iPSC derived neural cells

◢ SRX1813586: iPS cells

◢ SRX1813587: iPS cells

◢ SRX20140858: iPS cells

◢ SRX20140859: iPS cells

◢ SRX512370: iPS cells

◢ SRX6852811: KNS-62

◢ SRX10035162: KYSE-140

◢ SRX10407085: KYSE-70

◢ SRX277131: KYSE-70

◢ SRX6852808: LK-2

◢ SRX6852813: LK-2

◢ SRX6852814: LK-2

◢ SRX026880: LN-229

◢ SRX359955: LoVo

◢ ERX2260038: Lung cancer

◢ ERX2260040: Lung cancer

◢ ERX2260044: Lung cancer

◢ ERX2260046: Lung cancer

◢ SRX2731713: Lung cancer cell line

◢ SRX6750797: MDA-MB-231

◢ SRX6750798: MDA-MB-231

◢ SRX1813580: MRC-5

◢ SRX1813581: MRC-5

◢ SRX1813582: MRC-5

◢ SRX1813583: MRC-5

◢ SRX1813584: MRC-5

◢ SRX1813585: MRC-5

◢ SRX2732210: MRC-5

◢ SRX2732211: MRC-5

◢ SRX5771664: N2102Ep

◢ SRX5771666: N2102Ep

◢ SRX5771668: N2102Ep

◢ SRX11904443: NCI-H1836

◢ SRX11904444: NCI-H1836

◢ SRX6852809: NCI-H520

◢ SRX11904441: NCI-H82

◢ SRX11904442: NCI-H82

◢ SRX10445285: Neural crest cells

◢ SRX10445293: Neural crest cells

◢ SRX10445303: Neural crest cells

◢ SRX10445312: Neural crest cells

◢ SRX20140860: Neural progenitor cells

◢ SRX20140861: Neural progenitor cells

◢ SRX20140862: Neural progenitor cells

◢ SRX20140890: Neural progenitor cells

◢ SRX20140891: Neural progenitor cells

◢ SRX20140892: Neural progenitor cells

◢ SRX5716451: Neural progenitor cells

◢ SRX5716452: Neural progenitor cells

◢ SRX5716453: Neural progenitor cells

◢ SRX330107: ReN-VM

◢ SRX330108: ReN-VM

◢ SRX277134: T.T

◢ SRX3367070: TE-5

◢ SOX2: STRING

MTF2
NAV2
NRARP
IQCH
AAGAB
VANGL2
RCOR1
TRMT2A
RANBP1
INTS12
GSTCD
CCDC88A
FZD1
BAHCC1
SLC33A1
NOTCH1
UNC13B
JMJD7-PLA2G4B
JMJD7
WDFY2
MLEC
VWCE
NSA2
GFM2
TNRC18
LOC100129484
ATXN7L2
ZBTB40
PTMA
POLB
KDM3A
ARID2
PEX3
ADAT2
TJP2
MTRNR2L1
NDUFB5
MRPL47
WDR36
TRMT1
NACC1
RAET1E
HEXIM1
KLF7
GBA
ZFAND3
IPO4
CEP63
ANAPC13
RFLNA
TUT1
CFAP20
MRPS14
PER2
OGA
ZNF335
STAU2
PGK1
SYNCRIP
LIMK2
ZSCAN2
RTRAF
SNX16
PTCHD4
MRPL48
F11R
RASAL2
HSPH1
PPDPF
TSC1
GFI1B
ASF1A
BARHL2
PIK3CA
FAM168A
TMCC1
MTRNR2L8
HSPA4L
COL9A2
SLC9A9
CCDC152
HMGB1
USPL1
PYCR2
ACOT1
TUT7
PACSIN2
ZNF195
KLHL6
FAM227A
CBY1
RAB23
HEBP2
KRT6A
MRPL44
SOX14
SECISBP2
CYTH2
ZNF37A
GSN
LGR6
MYEOV
FRA10AC1
YLPM1
FNBP1L
H4C12
NDST1
LSG1
ARIH1
DDX17
SSBP1
TMEM88B
ANKRD65
KMT2A
MTRNR2L2
MSH3
DHFR
CCDC200
MOB3C
GABPB1
FANCI
CHD8
CAPRIN1
NOXA1
FGF19
PAN2
IL23A
TMEM205
CCDC159
RAB3D
ZBTB6
BZW2
ANKMY2
CELA3B
PTPRK
FMNL3
MRPL3
LY6G6D
KDM2A
UBTD2
MED23
PAXBP1
OGT
ITGB1
JUP
ZNF426
ANAPC15
SKIL
ZNF440
BCAS1
AP4E1
CLPB
DKK1
ANXA11
GRK6
PHF5A
ACO2
RMND1
ARMT1
NREP
DSTYK
SHC3
GBP6
DUX4
MUS81
CFL1
CYP2S1
SHF
BMS1
EIF4A2
FRG2
ITPRIP
DKK3
PPP1R18
NRM
NUPR1
KMT5B
C8orf58
CLTC
POLR3E
TMPRSS4
SLC29A3
MSANTD4
GREB1
PGBD2
INSM1
SOD2
WTAP
PRKCI
TMEM132A
MRPL21
IGHMBP2
USP30
SPIN1
C17orf75
RAPGEF5
ADRM1
FSCN1
CHD6
STMN1
PAFAH2
H4C15
H4C14
GPR137
DGLUCY
DUSP6
ALCAM
ESRP1
LMX1B
RARB
H4C11
ID1
TRAK2
STRADB
NCOA7
C19orf67
FAM83G
EDN1
MCCC1
EIF3F
SLCO1B3
IRX4
CEP41
CAV2
GALK2
COPS2
TIPARP
MTMR1
AAR2
RPL27
TMEM242
TMEM41A
SLC25A45
FRMD8
ZNF524
FIZ1
TRDMT1
PSME2
EMC9
RNF31
PTGES2
SUGCT
MPLKIP
CYB5R2
RBBP5
SINHCAF
ADAR
SNAP23
ZNF106
MNAT1
PPIP5K2
GIN1
SPHK1
PHIP
BRMS1
B4GAT1
COX16
STX16
COL17A1
OTUB2
TES
ALDH7A1
NFIX
KNL1
MRPS31
GET3
GAS1
RBFOX2
YWHAQ
N4BP1
NUF2
NPIPB5
NPIPB3
NPIPB4
GPSM3
FBXL19
ABCA13
NUP160
POLG
ZNF791
ZNF490
ZNF408
ARHGAP1
SPATA12
EXOC5
AP5M1
SLC44A1
TMEM101
MTDH
NSUN6
ARL5B
SLC35A3
ZBED5
SRPRA
NDUFS3
KBTBD4
ZSCAN9
CSRNP2
PLPP2
MIDEAS
CCDC116
MRPL42
LNX1
YEATS2
CEMIP
NPIPB8
KLF1
GCDH
MYMK
MARCKS
HEXIM2
ATAD2
FAM220A
NIBAN2
ZBTB8OS
RBBP4
GTF2H4
CACYBP
UBB
UBE2B
CDKL3
MAP3K9
ITGB4
GTF2H2C_2
GTF2H2
C15orf62
MAPK6
CHMP4B
NCBP2AS2
NCBP2
SPRED1
NR6A1
OLFML2A
GTF3C5
GPR84
PPP1CC
VTA1
NMBR
NASP
LTBP1
ARMCX5-GPRASP2
ARMCX5
TEFM
RTTN
TBC1D13
TBPL1
ARL2BP
SGCA
COMMD2
ZNF627
WDPCP
MDH1
CELA3A
NPAS4
TCF12
CALM2
EIF3E
SRSF6
SMUG1
NFKB1
PNRC1
DNTTIP2
C11orf49
ZBTB26
FAM227B
DTWD1
GTF2H2C
SCOC
NFE2L2
TRUB2
COQ4
MAPRE2
SMARCE1
STK35
KLHL24
NPIPB12
NPIPB13
ANKRD22
DISP3
PIMREG
ASXL1
ANKRD40
PRKDC
MCM4
USE1
RALGDS
SELENOH
CCT2
RTN4
HMGN1
PSMB7
PTX3
GTPBP3
ANO8
PHF21A
NDUFS5
EFHC1
UBE2F
C2orf42
CUEDC1
MEGF9
ZMPSTE24
ID4
NTMT1
CHD2
ADGRF4
FGD3
ETV4
MNT
LPP
SLC24A1
BCAR3
GLIPR1L2
DRG2
RBL1
INTS14
PALD1
KAT6A
NME1-NME2
NME1
RUVBL1
CCNG2
CD55
UNK
H3-3B
CLCF1
RCOR2
ZER1
PAIP2
COPS7B
PDE6D
UFD1
CDC45
EXOSC2
MS4A2
FGF7
EGFR
SSBP2
TRIP4
CHST15
PCNP
TCF7L2
SNAI2
SFT2D2
BORCS6
POR
PPP5D1
CALM3
SLC3A2
POLDIP3
BRF2
ESRRA
CATSPERZ
POLR2M
ACOT2
LRRC37A3
GARS1
CCNL1
SPRY4
ZNF443
ALG10
WDR24
SMARCB1
C16orf46
FAM98B
RABGAP1L
UQCRQ
GDF9
ARL14EP
RAPGEFL1
ZKSCAN8
OAZ2
GOLIM4
FCHSD2
IFRD1
HNRNPDL
ENOPH1
TSNAXIP1
RANBP10
FHL2
DMAP1
RPS7
AGO1
ZNF391
PPP1R2
AADAC
CLEC2B
VIT
LFNG
SMCO1
NELFCD
GADD45GIP1
FGF1
PDIA4
IREB2
DLX5
BRWD1
FIBP
MAP4K4
CTSW
EDARADD
KMT2B
PSMD3
TYSND1
MACROH2A2
PIH1D2
NKAPD1
RAD23A
ABCC10
GTPBP6
ZNF561
CCND1
NSFL1C
NHLRC2
DCLRE1A
ID2
H4C9
MEIG1
PC
CREM
SLC35E2A
UBASH3B
FOSB
C18orf21
NAB1
HR
ERAP2
NEFH
HSPE1-MOB4
HSPE1
HSPD1
PLEKHO1
RAB20
ZDHHC5
CDK5R1
ANXA2
AQR
IQSEC3
RFFL
CTNNB1
KLF12
CAMSAP1
TPR
ODR4
ZNF326
CSTF2T
CCDC88C
TMSB10
AHSG
USP6NL
PPIA
RAB18
GATA6
STK32C
LRRC27
PRXL2A
ZNF76
NPIPB11
SERPINB5
CPT1A
SNX27
CPNE2
ALS2
MRPL16
AP2B1
FXR1
PRMT5
ATF4
EPC2
BACH2
TTC32
EIF1AD
BANF1
VCPKMT
SDK1
BHLHE40
ZNF33A
USP47
LRP6
USP14
PDXDC1
KSR1
ONECUT2
FAM83B
FANCF
PEMT
NR1H3
ACP2
C1D
SLC25A36
PPP1R9B
PSMD14
ERLIN2
TMEM68
TGS1
GPR39
ZBTB25
ZBTB1
RBBP8NL
C11orf95
IST1
PHKA2
HDAC9
SRSF7
TSPAN14
HBP1
PBLD
HNRNPH3
SYT2
WASF1
CDC40
CDK12
LTA4H
YWHAZ
KRT80
ISL2
POU2F1
TMEM87A
GANC
ZNF292
SCPEP1
SRSF3
POC1B-GALNT4
GALNT4
CHMP1B
ISY1-RAB43
ISY1
ATAD5
DSG3
SOX2
FOXP1
LRRC8A
KYAT1
BLOC1S5
FAM3C
SMC2
DNASE1L2
RILPL1
DPY19L4
CCDC24
TINAGL1
METTL9
IGF2BP2
GADD45G
C15orf40
CEP120
DAPP1
ZFC3H1
THAP2
LY6G6F-LY6G6D
LY6G6F
ABHD16A
TP53I3
PCSK5
MTBP
MRPL13
EPB41L1
TIA1
ZNF518A
TMEM102
FGF11
OPA1
GFM1
TOP3B
SFPQ
PPARGC1B
SPINT1
FAM171A2
RASA2
ALKBH3
TMEM230
WDR74
JMJD1C
C2CD5
PALMD
CCNJ
PPFIBP2
FIGNL1
UCKL1
TRIM29
WDR27
C6orf120
BCL9L
DUSP1
STX10
IER2
PTPN6
C12orf57
ERCC6L2
MLLT11
CDC42SE1
FAM83A
ZNHIT2
FAU
TEX9
ZNF354C
RFX7
ZC3H6
CENPE
ZNF184
CLP1
NUDCD1
ZNF117
FARSA
CALR
CCDC117
PMEPA1
DPP3
RAD51AP1
C12orf4
TTC14
RPS26
FETUB
TSEN54
CASKIN2
KIAA0895L
SPRING1
RNFT2
FANCC
RAB14
WDR11
HSPB3
GTF3A
FRY
FURIN
MKRN2OS
SF3A3
TMEM249
SLC52A2
FBXL6
PSMF1
MKRN2
PSMD1
EIF2D
LLGL1
TPM1
GSG1
MAN2C1
ANKK1
FKBP5
SHOX2
RSRC1
COPS7A
MAPK8
TMC1
UBALD2
ZNF124
NPIPA3
NPIPA2
DHX36
ANKRD12
PRPF18
YIPF2
TIMM29
TIMM22
SLC36A3
HGS
ARL16
ABLIM1
ELOVL5
ELAPOR2
WDR54
C2orf81
ANKRD39
PHF14
SMG5
EMC4
PLEKHG4B
SNX8
TMEM79
ACOT7
HNRNPA1L2
SCAF4
FOS
ZSCAN12
FRAT1
PRKCSH
CCDC151
PKM
CASC3
HES1
TLE3
ZNF24
PRDM10
ADO
AHNAK2
ANAPC5
RCC1
SLC39A3
SAXO1
RRAGA
DOCK9
ICE1
BAZ1B
LAMP1
HEG1
KIAA1217
ZNF775
ZNF668
ZNF646
SPO11
CA12
NR4A1
DHX8
ETV5
ZFP36L1
KANSL1L
SLC4A7
VDAC2
GPR158
FAM228B
SLC38A2
SF3B6
ITGB3BP
EFCAB7
DEK
WSB1
MED25
FUZ
SIX2
MIDN
MRPS30
MCM7
AP4M1
NADK2
KHDRBS1
LRRC8B
RPS29
AURKAIP1
BACH1
RMI1
HNRNPK
JRK
AP3S2
OR2T1
ARHGAP42
NUP93
PTEN
KLLN
ZDHHC6
VTI1A
SIRT4
GNA12
ETNK2
MAPK10
SMC3
HNRNPAB
STAT3
PRDM2
RPL5
ZNF785
BIRC3
FEM1B
METTL15
KIF18A
ZXDC
KLF6
CD2BP2
TSPAN5
RNF19A
GABPB2
HS6ST1
TOR1A
LSM5
AVL9
GMEB2
COP1
SPRR4
NBPF1
MEOX1
DNAJC25-GNG10
DNAJC25
BNIP1
HUS1
CGAS
KLF3
TLE1
RBM25
TANK
NR2E1
ATP5MC3
WDR97
MAF1
KLF4
GOLGB1
POMGNT1
GID4
ATPAF2
HOXA9
ZNF84
RGMA
CORO2B
SUGP1
MAU2
SECISBP2L
H3C3
H2BC3
MTIF2
FRAT2
MRPS23
TRIB1
ZFHX2
THTPA
NCOA5
ZNF189
MRPL50
INPP4B
ETV1
GNAL
ANKRD50
ATG10
SCAND1
SS18
PRADC1
CCT7
PRND
SKIDA1
G3BP2
GEMIN4
CDH13
COPB1
CALM1
ARHGEF12
GRHL2
FKBP3
FANCM
MEF2A
GSTA4
LONRF1
ZNF799
ZDHHC2
COL5A2
SLC20A2
TIAL1
DNM1L
NME7
BLZF1
KDM7A
NUDT3
MPHOSPH10
MCEE
SNRPD3
GUCD1
PIWIL1
MTERF1
FADD
COL4A6
COL4A5
ERGIC2
TCTEX1D4
ARHGDIB
BTBD19
FAM133B
FAM107B
NIPBL
TXNDC9
EIF5B
LPCAT4
ZNF277
DOCK4
DNAH5
LDLR
MRPL53
YTHDF2
H3-3A
EEF1A1
SLC16A13
TNFRSF21
PCBP2
VPS8
RPS3A
UBOX5
FASTKD5
ZNF675
TADA1
U2SURP
ST3GAL2
TRA2B
OR2A1
SYT1
ZSCAN30
CIPC
RHEB
STAT6
BBS1
OR2A42
BARHL1
ANXA8
ZSWIM4
PDE4D
ZNF750
UCHL5
RO60
SRP14
CTXN3
SASS6
TTC21B
EPC1
UBE2D1
ZFAND5