ChIP-Atlas: Target genes

Potential target genes for SOX2

Query protein: SOX2
Distance from TSS: ± 1 kb  ± 5 kb  ± 10 kb
Sort key: SRX6852813 | LK-2
 
Color legends
  1000 750 500 250 1 0  (Values = Binding scores of MACS2 and STRING)

Download: TSV (text)
Links: Movie and Document for ChIP-Atlas Target Genes
SOX2's Target genes

◢ SOX2: Average

◢ SRX130061: BJ

◢ SRX10407083: Esophageal squamous carcinoma cell line

◢ SRX10407084: Esophageal squamous carcinoma cell line

◢ SRX5286338: ES cells

◢ SRX5286339: ES cells

◢ SRX5286342: ES cells

◢ SRX5286343: ES cells

◢ SRX11904439: H29

◢ SRX11904440: H29

◢ SRX6852812: HCC2814

◢ SRX277137: HCC95

◢ SRX6852810: HCC95

◢ SRX3205373: Head and neck squamous cell carcinoma 

◢ SRX702105: hESC derived mesendodermal cells

◢ SRX702106: hESC derived mesendodermal cells

◢ SRX702108: hESC derived mesendodermal cells

◢ SRX1047416: hESC derived neural cells

◢ SRX11919277: hESC derived neuromesodermal cells

◢ SRX011616: hESC H1

◢ SRX1047413: hESC H9

◢ SRX277140: hESC H9

◢ SRX6101128: hESC H9

◢ SRX6101129: hESC H9

◢ SRX266860: hESC HUES64

◢ SRX266861: hESC HUES64

◢ SRX702107: hESC HUES64

◢ SRX702109: hESC HUES64

◢ SRX20532164: hESC HUES8

◢ SRX20532165: hESC HUES8

◢ SRX5286340: hESC WIBR2

◢ SRX5286341: hESC WIBR2

◢ SRX5286344: hESC WIBR2

◢ SRX10101684: hESC WIBR3

◢ SRX10101685: hESC WIBR3

◢ SRX8026053: hESC WIBR3

◢ SRX8026055: hESC WIBR3

◢ SRX968908: iPSC derived neural cells

◢ SRX968909: iPSC derived neural cells

◢ SRX968910: iPSC derived neural cells

◢ SRX968911: iPSC derived neural cells

◢ SRX968912: iPSC derived neural cells

◢ SRX1813586: iPS cells

◢ SRX1813587: iPS cells

◢ SRX20140858: iPS cells

◢ SRX20140859: iPS cells

◢ SRX512370: iPS cells

◢ SRX6852811: KNS-62

◢ SRX10035162: KYSE-140

◢ SRX10407085: KYSE-70

◢ SRX277131: KYSE-70

◢ SRX6852808: LK-2

◣ SRX6852813: LK-2

◢ SRX6852814: LK-2

◢ SRX026880: LN-229

◢ SRX359955: LoVo

◢ ERX2260038: Lung cancer

◢ ERX2260040: Lung cancer

◢ ERX2260044: Lung cancer

◢ ERX2260046: Lung cancer

◢ SRX2731713: Lung cancer cell line

◢ SRX6750797: MDA-MB-231

◢ SRX6750798: MDA-MB-231

◢ SRX1813580: MRC-5

◢ SRX1813581: MRC-5

◢ SRX1813582: MRC-5

◢ SRX1813583: MRC-5

◢ SRX1813584: MRC-5

◢ SRX1813585: MRC-5

◢ SRX2732210: MRC-5

◢ SRX2732211: MRC-5

◢ SRX5771664: N2102Ep

◢ SRX5771666: N2102Ep

◢ SRX5771668: N2102Ep

◢ SRX11904443: NCI-H1836

◢ SRX11904444: NCI-H1836

◢ SRX6852809: NCI-H520

◢ SRX11904441: NCI-H82

◢ SRX11904442: NCI-H82

◢ SRX10445285: Neural crest cells

◢ SRX10445293: Neural crest cells

◢ SRX10445303: Neural crest cells

◢ SRX10445312: Neural crest cells

◢ SRX20140860: Neural progenitor cells

◢ SRX20140861: Neural progenitor cells

◢ SRX20140862: Neural progenitor cells

◢ SRX20140890: Neural progenitor cells

◢ SRX20140891: Neural progenitor cells

◢ SRX20140892: Neural progenitor cells

◢ SRX5716451: Neural progenitor cells

◢ SRX5716452: Neural progenitor cells

◢ SRX5716453: Neural progenitor cells

◢ SRX330107: ReN-VM

◢ SRX330108: ReN-VM

◢ SRX277134: T.T

◢ SRX3367070: TE-5

◢ SOX2: STRING

NRARP
SRP68
LFNG
ARID2
GABPB2
RIIAD1
CELF3
PLPP2
CCPG1
C15orf65
NTN5
PTMA
TES
NAV2
PIPOX
C2CD4D
NOTCH1
PYM1
DGKA
ZMAT4
LRP12
SMCO1
FAM227A
CBY1
MTF2
WFDC8
CTNNA1
LRRTM2
GGH
ARPIN-AP3S2
ARPIN
ZNF335
GRK6
PXYLP1
CDX2
CLUAP1
TSKU
HDAC4
SH3BP4
IL21
CDH18
VWCE
NFIB
KIAA0040
HGS
ARL16
MATR3
TMCC1
ANKRD6
ECT2
ZSCAN2
SNAPC3
PRR15
PER2
VWA2
IFRD1
TARS3
ZBTB45
DCSTAMP
LOXL3
DOK1
ID2
LMCD1
PLEKHG1
PLCH1
SYBU
NDUFB5
MRPL47
TASP1
ZNF775
LPP
CDK5R1
MED25
FUZ
ZNF750
HES1
HMGB1
MUC1
GSN
ODF4
CCT2
HMGN1
KIAA2012
CLDN14
YEATS2
MYEOV
EPHB3
ESRRA
CATSPERZ
EPHX3
SINHCAF
RNF217
SAPCD2
KCNN2
EPYC
STK31
LRIG1
HES5
PANK4
SIX2
SRGAP1
GSTP1
VASH2
SLC20A2
KDM2A
SEPTIN9
GEMIN4
BCL9
C1QTNF7
LTK
CCL26
ALDH1A1
CRYGD
CRYGC
ESYT3
ETV3
MARCKS
SLCO5A1
IQCH
AAGAB
SLC12A7
CEMIP
SH3GL3
SNX27
KMT2B
BMPR2
ZDHHC3
EXOSC7
AUH
ERMN
SPDYE14
SPDYE10P
DPYSL3
UPF1
TLR4
CLEC4F
CYP1A1
SACS
H4C15
H4C14
LTBP1
LOC100506422
SYNCRIP
AKIRIN2
TGIF1
RAB23
HDAC9
TIA1
KLF7
NEBL
RORC
KRT8
TMPRSS7
YWHAQ
PTGR1
FBXL19
MUS81
CFL1
LYPLAL1
TJP2
DNAJB1
HSF2
PTP4A3
POLB
SPRY4
SYNE2
ST7
LY6G6D
KIF21B
TRMT12
HAO2
DHX8
ARIH1
STAU2
MACROH2A1
SOX2
CEP85L
CYTH2
VEZT
FGD6
SLC25A36
MSANTD4
CHN2
CPVL
EHD4
ZSCAN10
METTL11B
TLE3
HOXA9
TMEM132A
DDX17
POGZ
ST6GAL1
CALHM4
ESRP1
OAZ2
CBX1
HNRNPLL
ZDHHC5
LRATD2
WIPI1
CRISPLD1
SDHC
FOXJ3
ST3GAL4
CD46
STAG3
GPC2
TMPRSS4
ABL2
RNF20
GTF3C3
PRSS23
CSRNP2
PHF5A
ACO2
DOCK9
GBX2
HAUS6
PPIA
ZNF687
MAT1A
HNRNPDL
ENOPH1
PDIA4
TMUB2
SLC16A13
MKRN3
HTR1A
PMEPA1
POLI
ONECUT2
SMARCA2
NADK
FGF19
HES6
ELAPOR1
C1orf194
BAHCC1
TBL1XR1
UBE2G1
PXDC1
NIBAN2
TRAK2
STRADB
SRRM4
ANKHD1-EIF4EBP3
ANKHD1
BCL2L11
SC5D
CPSF4L
CLEC9A
SOX14
ALDH1B1
DAGLB
MTDH
TRPC3
ZFC3H1
THAP2
JUP
USP54
HSD3B1
ETV1
PPDPF
SHF
TNFAIP2
RAB30
LAMC1
LMO3
ATXN1
ZBTB8OS
RBBP4
APOBEC3F
CTTNBP2NL
NARF
CPA5
TRIB1
KLHL24
FGD3
SLC33A1
NUP160
BORCS6
TIAL1
ZNF304
RBM20
EYA1
MGST3
ZNF358
LPAR6
ZNF608
CPT1A
ARID5A
H3C8
H2BC10
S100A2
CELF2
SF3A2
PLEKHJ1
DDX58
APOD
KCNE3
LIMK2
CLCN3
MEX3D
TMEM17
DISC1
TMEM205
CCDC159
RAB3D
ANKRD44
MBLAC1
ID3
VGF
MTA2
TANC1
ALDH3A1
ZNF428
SYTL2
GADD45A
CLIC5
CLRN3
CHD6
GPSM3
TNRC18
LOC100129484
UBQLN4
LAMTOR2
HEBP2
RIMBP2
IGF1
PGK1
DDX43
GDF5
CEP250
MCM7
AP4M1
UBE2T
GPR1
PSMG4
FAM120B
DLL1
HIP1R
ANP32E
PTHLH
FNBP1L
MRO
MTA3
KCNG3
SH2B2
GRIK3
NRCAM
ITGB4
MNT
TBC1D16
FMNL3
MSRB3
NHSL1
OPN3
CHML
MCCC1
MANSC1
DMRTA2
GADD45G
SPHK1
CELSR3
LPCAT4
EPB41L4B
TMEM68
TGS1
CDC42EP3
PIF1
SLC2A4
TSPAN13
NCOA4
UGT1A5
HMOX1
ROPN1B
CLK3
MDM4
GRAMD2A
SH3PXD2B
PTPRO
SNTB1
CRYGB
FMN1
FTH1
AFAP1
LOC389199
MEGF9
WDFY2
SAXO1
RRAGA
FGFRL1
PDIK1L
ETV6
ERV3-1-ZNF117
ERV3-1
ZSCAN9
SCN1A
KIAA1671
TPD52L1
SEC16B
SH3PXD2A
CEMIP2
GTF2IRD1
UNK
H3-3B
LGR6
ZNF277
DOCK4
DLX5
MFSD6
GABRR2
ZNF184
MAEA
ANAPC15
CNP
GIMAP5
PCDHB8
PCDHB16
STK32C
LRRC27
INSM1
USP6NL
PARVG
NBPF26
ZNF273
ZNF180
SYNE3
ZBTB6
EIF3E
THEM4
BAZ2A
CDR2
RFX5
C20orf96
HACL1
BTD
TUBB
MDC1
KNTC1
PAN2
IL23A
H3C6
CDC27
SELE
CALN1
TLX3
LDB1
ZCCHC12
ZSCAN31
THEMIS
MAP4K4
LYPD6B
ID1
CCDC33
H2AZ2
YPEL1
ZFYVE21
XRCC3
OR4C6
KLF6
TRIM13
TTC23L
TDGF1
SYT2
EMSY
MIDEAS
SRSF7
FOXO6
PTX3
GPX6
TOMM40
PSMB7
BTG1
VAV3
TUFT1
ZNRF3
RNF157
ZC3H7A
GLI2
TLN2
BAZ1B
ANXA2
SCRT1
TUT7
PROSER2
ADAMTS19
TPRG1
ZNF195
NKIRAS1
RPL15
NEFH
USP22
BBS7
DPP3
CCDC88A
MAFG
CEP68
ADRM1
SDHD
CITED2
SNAP23
ZNF106
ZBTB38
ACTB
BRINP2
SPATA12
STAT3
WIPF1
RNF145
RNF38
LIMCH1
MIDN
ZNF250
CIART
BMERB1
PRUNE2
FAM136A
LZTS1
LMO4
ARHGEF38
HSBP1L1
RRBP1
GREB1
ZNF107
LMO2
SEMA6C
MGAT5B
FOXD1
LNX1
PWWP2A
PLEKHG4B
CD24
VOPP1
NFE2
RBP1
ZFP62
TCF4
CDK5RAP2
POLR2M
RAB11B
FAM91A1
TAX1BP3
EMC6
NTMT1
HNRNPAB
PPFIBP2
FIGLA
GOLGB1
SLC1A3
KCNA6
ELK3
PRKX
SASH1
SLC9A2
MAST4
TMEM211
HSPA13
PDP1
DUSP7
PNRC1
TRMT2A
RANBP1
OARD1
NFYA
EIF4A2
POC1A
DIO2
FAM76B
CEP57
NAXD
HECTD4
NAP1L4
HDDC2
EPHX1
RFLNA
SLC25A11
RNF167
PPME1
C2CD3
EXPH5
TAF1A
MRPS2
C9orf116
CDCP2
TLE1
BARHL2
ZFP69B
PLS1
GPER1
ST6GALNAC1
AGO1
DST
TOMM40L
APOA2
CCNJ
STMN1
ZSWIM4
NELFCD
EID1
SACM1L
FILIP1L
RERE
ARMC3
PON2
MROH1
WDR36
SDE2
DNMBP
NDUFS5
POFUT1
PLAGL2
CASTOR2
OSBPL1A
PLXNB2
H2AJ
LINGO4
PARP1
ZCCHC14
KANSL1L
CDIN1
GOLIM4
WASHC3
PELATON
VCAM1
HOXC8
ZBTB2
SLC35E2B
YWHAG
CSRNP3
DMRT3
BAG3
KCNMA1
GET3
TESK2
SLC7A11
ZNF92
TXNDC16
GPR137C
PPP1R14D
EGR3
ZNF84
ZBED5
FAM83A
SCNM1
LYSMD1
AMELX
CTSV
CAPRIN1
SFPQ
RAI14
C6orf132
MALT1
ACSS3
ZNF736
LGALS9
EXOC5
AP5M1
RPUSD4
FAM118B
CRYAB
C11orf52
HSPB2
RAB36
RSPH14
MSX2
ZNF630
RNF115
POLR3C
CTDSP1
MRPS30
NAGPA
CACHD1
CD2BP2
CNOT11
CTH
VANGL2
PELI1
DGKD
HOXD3
S100A16
PAIP2
RBFOX2
TMEFF1
HEXIM2
PPP1R2
GPR137
TCIM
C15orf40
HES2
ESPN
R3HCC1
TMX2
MED19
MAP2
ZCCHC8
ETS2
SLC39A8
SDCCAG8
CEP170
CNKSR3
JMJD7-PLA2G4B
JMJD7
MID1
POU2F1
VPS50
HEPACAM2
LRRC8A
KYAT1
KRT15
AGTPBP1
AMN1
ACSL6
MOSPD3
GP5
NFX1
GDPD1
PTK2
SLC9A8
SERTAD4
ETV4
DDX3X
SUFU
ACTR1A
SHROOM3
VEPH1
CBX2
STK4
MUC15
OR5AP2
GXYLT2
FZD2
HK2
GSG1
FBRS
ZNF720
ZSCAN16
KMT5A
CAST
PACSIN3
SUMO2
NASP
COPS7A
ARNT
STC2
PKMYT1
KRTAP3-1
ISL2
GRB10
PPP1CB
ZNF506
GOLPH3L
C6orf118
ZFHX3
ADAR
IP6K2
CDC7
PHF3
TMEM44
MAT2A
PHLPP1
ERGIC2
CUEDC1
WBP11
C12orf60
SRPRA
AGPAT3
SESN2
RIN2
PIWIL1
NOTUM
CHRNA1
NAA40
SCAF4
DYRK1B
PRKRIP1
MICAL3
NNT
DIPK1A
FGFBP1
CSRP3
ECE1
DIABLO
PEX11G
HILPDA
EGFLAM
DUSP12
RTBDN
MAST1
PIMREG
DDX5
PTPRK
PRKAB2
CHD1L
PPFIBP1
RGS7BP
MT1X
NPDC1
MMD
SNAI2
QSOX2
PHC2
EXOC6
LPIN1
AKR1C2
GPR15
RTN4
HSPH1
NACAD
SCAF11
SLC12A9
EPHB4
PEBP1
HOXA7
CXADR
AP3M2
RPS6KA2
PLXNB1
ZNF680
ILVBL
DIPK2A
PCDHB13
PHF12
GSX1
CACYBP
CLDN20
NR4A1
LUC7L
VPS37B
ACTR2
SUN1
SLC30A8
MAPKAPK3
CISH
ESPNL
IGSF9
CHMP4B
USP30
SVOP
RABGAP1L
CCDC88C
FZD1
ICE1
VRK2
CYP17A1
GOLGA6B
PRRC2B
ZFAND3
SKIL
CD300LB
CYTH1
PRKDC
MCM4
MKRN2OS
HOXB3
HOXB4
CTSK
GAD2
ITGB1
KIAA0895L
AKAP9
TRIM38
USPL1
S100A5
S100A4
EIF4A1
S100A3
PRSS56
ARHGEF18
ASNS
ITPRIP
YLPM1
ETV5
STON1-GTF2A1L
STON1
PRR19
PAFAH1B3
LEF1
GOLGA6L3
EXOSC2
THSD4
PRB4
KDM3A
SPO11
RGL1
ICOS
PDE6A
ERBB4
ANO6
PDCD6
NRSN1
HOMER2
COX8A
PGM2L1
RAB5C
NEK2
ACLY
CDC14B
IFT80
SMC4
ZNF124
PI4KB
RCOR2
SUSD2
PPIAL4C
GNB1
DUSP6
PTP4A1
PRDM1
ZBTB7C
SOCS3
RGS3
KRT23
KLF12
TNFSF9
RAB2A
DLX1
FAM166C
OTOF
FAM181B
LLGL1
MYL12A
NBPF12
FDXR
ADAM10
FGF18
IL7R
FERMT1
TNIP1
SLC4A7
ST8SIA1
NBPF11
SORD
OGA
ZMAT2
ARF4
RSF1
AAMDC
CHD2
SCD
NUP93
EFHC1
DNM1L
ADD2
DMWD
SIRT1
C7
WIPI2
USP25
SPIN1
HID1
FUT4
CCNG2
ZBTB26
NUFIP2
ZNF268
CHST12
RPA2
HSD17B12
UTP25
TFAP2A
KDM5B
ZNF524
FIZ1
BMF
NBPF20
YES1
CEP295NL
ZBTB10
KPNA4
TPM1
ZNF292
TNPO1
CACNB3
ATOH8
HBP1
GATA3
ZMIZ2
GNA12
RAPGEF2
METTL9
DNAH1
RNF152
PDE7A
BACH2
TPK1
RXRG
CSNK1E
TWIST2
PCBP1
PIM1
MLLT6
FAM114A1
HES3
ICMT
SOX5
AASDH
FSCN1
C1orf100