ChIP-Atlas: Target genes

Potential target genes for SOX2

Query protein: SOX2
Distance from TSS: ± 1 kb  ± 5 kb  ± 10 kb
Sort key: SRX6852814 | LK-2
 
Color legends
  1000 750 500 250 1 0  (Values = Binding scores of MACS2 and STRING)

Download: TSV (text)
Links: Movie and Document for ChIP-Atlas Target Genes
SOX2's Target genes

◢ SOX2: Average

◢ SRX130061: BJ

◢ SRX10407083: Esophageal squamous carcinoma cell line

◢ SRX10407084: Esophageal squamous carcinoma cell line

◢ SRX5286338: ES cells

◢ SRX5286339: ES cells

◢ SRX5286342: ES cells

◢ SRX5286343: ES cells

◢ SRX11904439: H29

◢ SRX11904440: H29

◢ SRX6852812: HCC2814

◢ SRX277137: HCC95

◢ SRX6852810: HCC95

◢ SRX3205373: Head and neck squamous cell carcinoma 

◢ SRX702105: hESC derived mesendodermal cells

◢ SRX702106: hESC derived mesendodermal cells

◢ SRX702108: hESC derived mesendodermal cells

◢ SRX1047416: hESC derived neural cells

◢ SRX11919277: hESC derived neuromesodermal cells

◢ SRX011616: hESC H1

◢ SRX1047413: hESC H9

◢ SRX277140: hESC H9

◢ SRX6101128: hESC H9

◢ SRX6101129: hESC H9

◢ SRX266860: hESC HUES64

◢ SRX266861: hESC HUES64

◢ SRX702107: hESC HUES64

◢ SRX702109: hESC HUES64

◢ SRX20532164: hESC HUES8

◢ SRX20532165: hESC HUES8

◢ SRX5286340: hESC WIBR2

◢ SRX5286341: hESC WIBR2

◢ SRX5286344: hESC WIBR2

◢ SRX10101684: hESC WIBR3

◢ SRX10101685: hESC WIBR3

◢ SRX8026053: hESC WIBR3

◢ SRX8026055: hESC WIBR3

◢ SRX968908: iPSC derived neural cells

◢ SRX968909: iPSC derived neural cells

◢ SRX968910: iPSC derived neural cells

◢ SRX968911: iPSC derived neural cells

◢ SRX968912: iPSC derived neural cells

◢ SRX1813586: iPS cells

◢ SRX1813587: iPS cells

◢ SRX20140858: iPS cells

◢ SRX20140859: iPS cells

◢ SRX512370: iPS cells

◢ SRX6852811: KNS-62

◢ SRX10035162: KYSE-140

◢ SRX10407085: KYSE-70

◢ SRX277131: KYSE-70

◢ SRX6852808: LK-2

◢ SRX6852813: LK-2

◣ SRX6852814: LK-2

◢ SRX026880: LN-229

◢ SRX359955: LoVo

◢ ERX2260038: Lung cancer

◢ ERX2260040: Lung cancer

◢ ERX2260044: Lung cancer

◢ ERX2260046: Lung cancer

◢ SRX2731713: Lung cancer cell line

◢ SRX6750797: MDA-MB-231

◢ SRX6750798: MDA-MB-231

◢ SRX1813580: MRC-5

◢ SRX1813581: MRC-5

◢ SRX1813582: MRC-5

◢ SRX1813583: MRC-5

◢ SRX1813584: MRC-5

◢ SRX1813585: MRC-5

◢ SRX2732210: MRC-5

◢ SRX2732211: MRC-5

◢ SRX5771664: N2102Ep

◢ SRX5771666: N2102Ep

◢ SRX5771668: N2102Ep

◢ SRX11904443: NCI-H1836

◢ SRX11904444: NCI-H1836

◢ SRX6852809: NCI-H520

◢ SRX11904441: NCI-H82

◢ SRX11904442: NCI-H82

◢ SRX10445285: Neural crest cells

◢ SRX10445293: Neural crest cells

◢ SRX10445303: Neural crest cells

◢ SRX10445312: Neural crest cells

◢ SRX20140860: Neural progenitor cells

◢ SRX20140861: Neural progenitor cells

◢ SRX20140862: Neural progenitor cells

◢ SRX20140890: Neural progenitor cells

◢ SRX20140891: Neural progenitor cells

◢ SRX20140892: Neural progenitor cells

◢ SRX5716451: Neural progenitor cells

◢ SRX5716452: Neural progenitor cells

◢ SRX5716453: Neural progenitor cells

◢ SRX330107: ReN-VM

◢ SRX330108: ReN-VM

◢ SRX277134: T.T

◢ SRX3367070: TE-5

◢ SOX2: STRING

NRARP
PTMA
FAM227A
CBY1
KIAA2012
RIIAD1
CELF3
GABPB2
STC1
SRP68
ALDH1A1
MTF2
VWCE
BCL9
NTN5
NOTCH1
EPYC
APOD
LFNG
NAV2
ARID2
GEMIN4
NDUFB5
MRPL47
CDX2
MATR3
MED25
FUZ
PRSS23
PYM1
DGKA
RGS2
EPHX3
ANKHD1-EIF4EBP3
ANKHD1
LINGO4
STK31
ZSCAN2
SLC20A2
LMO3
CTNNA1
LRRTM2
SMARCA2
PRR15
GGH
FOXP1
GRK6
PIPOX
C1QTNF7
KRTAP19-2
KRTAP19-1
CDH12
IQCH
AAGAB
TJP2
ANKRD6
HDAC4
HMGB1
SLC12A7
VAV3
IFRD1
SH3GL3
CLEC4F
TMEM17
ZNF750
CYP1A1
SNAPC3
ABCB10
CEP85L
PLEKHG1
SLCO5A1
TPRG1
ETV3
CLEC9A
LRP12
LIMK2
TLX3
DDX17
C2CD4D
TARS3
PLPP2
HAUS6
EHD4
HGS
ARL16
ETV1
TMCC1
ANKRD44
GCNT1
ID3
TES
ZDHHC3
EXOSC7
ARIH1
KCNA6
PER2
POLI
AMN1
H3C6
HAO2
LYPLAL1
HOXA9
PGRMC2
MLLT11
CDC42SE1
SOX14
WFDC13
WFDC10B
AP1M1
KMT2B
PLA1A
UNK
H3-3B
PHF5A
ACO2
CEMIP2
ESYT3
UGT1A5
KRTAP3-1
BAHCC1
FBXL19
ZNF775
PPFIBP1
GLI2
CCPG1
C15orf65
CDC27
CAST
TRIB3
NUP160
SINHCAF
TMEM68
TGS1
CSTB
SH3BP4
H4C15
H4C14
TRIP11
GRAMD4
RTBDN
MAST1
DPYSL3
YEATS2
NARF
TSKU
NADK
LINGO1
ESRRA
CATSPERZ
LAMC1
MARCKS
PRDX1
CLRN3
CLUAP1
C3orf20
TRPC3
HDAC9
WFDC8
MSANTD4
KIAA0040
ZNF335
SYNE2
PRKAB2
HPS4
MAST4
KDM2A
ARHGAP24
MAD2L1BP
GTPBP2
GTF3C3
LOC100506422
ZFC3H1
THAP2
CCT2
LMNA
AUH
RFLNA
RNF217
CHRM3
RORC
IL21
ONECUT2
AKIRIN2
SLC33A1
RNF20
KRT23
PTGR1
NRCAM
ESRP1
ZSCAN10
PLK2
ROCK2
SEPTIN9
C6orf132
GOLPH3L
MROH1
TLE1
KDM3A
PTCH1
MUS81
CFL1
ZNF428
RFX5
MTUS1
MAP3K9
DISC1
MFSD4B
SHC3
HNRNPLL
ECT2
ID2
NDUFS5
BORCS6
PPME1
C2CD3
SPRY4
LRATD2
DUX4
ZNRF3
RAB23
FRA10AC1
ZNF195
NACAD
TBL1XR1
ITGB4
HES3
ICMT
HMGN1
ZNF687
EGFLAM
POLB
ZMAT4
HCRTR2
CEP68
SIX2
CDC42SE2
KCNN2
NRP2
KLF6
HOXB9
CDH18
TPD52L1
USP39
CAV2
FIGLA
FOXP2
ATXN1
RIN2
LCE3A
SLC39A8
C1orf100
SH2B2
LRP1B
IL31RA
MEX3D
LTBP1
NDE1
MARF1
PI4KB
UBTD2
CGN
PLCH1
ZBTB6
TRIB1
STON1-GTF2A1L
STON1
PDZRN3
ZBTB45
AGPS
LTK
TAS2R50
CLCF1
PDP1
JMJD7-PLA2G4B
JMJD7
COX20
ZNF84
BCL2L11
DUSP12
KNTC1
PDIK1L
CYTH2
ADD2
FTH1
EIF4EBP1
RSF1
AAMDC
ZFP69B
PGK1
NUCKS1
ZNF608
MACROH2A1
OAZ2
PSMB7
SRI
AKAP6
DCSTAMP
CEMIP
CRTAP
VCAM1
NPY4R2
NPY4R
TPST2
TIAL1
GOLGB1
TNFAIP2
DDAH1
DPP3
ST6GAL1
SYBU
FIGNL1
SCNM1
LYSMD1
FGF1
SLC25A36
SDHC
SRGAP1
ACTR2
ETV4
CPT1A
ELF1
UTP25
WBP4
TRAK2
STRADB
POGZ
RPS11
CHN2
PIF1
CPVL
CDK5R1
GADD45G
TLR4
HHIPL2
SHF
F11R
SNX27
PHIP
SNRPN
SNURF
CAPRIN1
DST
TMEM132A
ADH5
MBLAC1
TMEM211
CRISPLD1
LIMCH1
PIK3R3
SNAP23
TLE3
ZNF106
ARNT
LMCD1
H3C8
H2BC10
CUEDC1
FOXJ3
FNBP1L
RHOJ
IGF1
CTSV
S100A10
HSPA1B
SNTB2
PDIA4
ATP13A3
CDKN2B
LAMP1
SC5D
FBXO48
APLF
STX6
DMRT3
ZNF304
SPATA12
HACL1
BTD
KANSL1L
MIOS
MDM4
SCN1A
ZBTB40
SPRED2
TM4SF20
MYEOV
ANAPC15
PCDHB8
PCDHB16
TLN2
JUP
CEP63
ANAPC13
MANSC1
ZNF736
RAP2B
TNRC18
LOC100129484
TRMT2A
RANBP1
OR2H2
ANKK1
ACSL6
MRO
SLC30A8
CORO7
DNAJB2
SEMA6C
PADI1
ITPRIP
HMOX1
ETV6
CNIH4
NAA40
PTPRO
AKR1C2
KLF7
DLX5
TCF12
POLR2M
TMPRSS4
ALDH1B1
FGF3
CITED2
LMNTD1
MCCC1
SLC25A11
RNF167
GATA3
SDHD
TMCC3
RAET1L
GSN
EMSY
VANGL2
AGTPBP1
OR10S1
PMEPA1
CDC42EP3
TTI2
CHMP4C
NPTX2
RAI14
TMEM88B
ANKRD65
RPA3
ICOS
AGPAT3
POC1A
TIA1
FGF19
ALDH3B1
RCC2
SELENBP1
SYT2
SHROOM3
PIMREG
VGF
FMN1
HES1
ST7
CHKB
OR2T1
ZNF184
CACHD1
CHD6
LNX1
CEP164
MNAT1
TWIST2
SH3D19
BBS7
ARHGAP5
PRKX
SERTAD4
FGF18
MID1
NEFH
EIF4A2
EMP1
AMELX
UBOX5
FASTKD5
KCNH8
SEC24B
H3C15
H3C14
H2AC19
H2AC18
RBM20
ZDHHC5
RPL27
ZNF292
ANP32E
OTUD7B
FAM83A
MUC15
VASH2
HSF2
HCN4
OR5AP2
ARID5A
HSPB3
BHLHE40
SCT
CDHR5
SYNCRIP
ADRM1
PRDM10
VDAC2
PTP4A3
BRD4
ETS2
TRIM61
ZNF395
RRBP1
MCM7
AP4M1
CDIN1
SST
SPHK1
KLHL24
NFIX
AFAP1
LOC389199
LDB1
SPDYE14
SPDYE10P
ABLIM1
MFSD6
GRAMD2A
ST8SIA1
METRNL
SMCO1
FGFR2
WASF1
CDC40
GBX2
PPP1R2
DENND4A
PTGES2
RCN1
RASAL2
TRIM13
UPF1
ZNF346
SF3A2
PLEKHJ1
KDM5B
NDUFS8
PRUNE1
MINDY1
TDRD1
CD59
CXCL13
PIN4
IFT80
SFPQ
MIDEAS
FILIP1L
TPM1
SMC4
LMO4
ZNF680
RNF187
MYPN
RABGAP1L
CTTNBP2NL
GAD2
PCBP1
CHRNA9
FANCI
OTULINL
OGA
TCF4
AKAP9
IP6K2
TBC1D31
CPSF4L
CHST12
ANXA2
LY6G6D
MS4A2
CLK3
PBXIP1
MRPL42
C18orf21
OPN3
CHML
PAK6
THEMIS
G3BP1
CSRNP2
NSA2
GFM2
SPRING1
RNFT2
EYA1
QSOX2
MT1X
COL6A5
INSM1
ZSCAN9
ZBTB2
LYRM1
DCUN1D3
POFUT1
PLAGL2
KRT8
LPP
MAP2
HEBP2
INTS9
HMBOX1
OR13C2
SLC7A11
SLC26A8
MAPK14
PFKFB3
PHF14
GFOD1
ARHGAP39
FOXO6
SLC3A2
CNP
ZNF268
VPS50
HEPACAM2
DMRTA2
VGLL4
PIP4K2C
GABRR2
KNL1
NOBOX
GPER1
IRF4
NEBL
MTHFD1
RTRAF
C1orf54
APH1A
SLC45A4
RNF152
CBLC
FUCA1
AURKB
TBC1D16
TMUB2
HSD3B1
KDM7A
MT1B
SGK3
C1orf116
PDS5B
MT1F
MUC1
CNKSR3
TAX1BP3
EMC6
RIC8B
LMO2
SOX6
ERMN
ETV5
CCDC88A
C11orf58
CTH
ERV3-1-ZNF117
ERV3-1
ICE1
ST3GAL4
BMERB1
CYP17A1
UBE2QL1
SACS
FZR1
ZBTB10
RGS7BP
RHBDL2
RAB30
TUBA1C
SYTL2
RADIL
DDX41
WBP1L
SAPCD2
ZFAND3
KIAA0895L
UXS1
METTL9
RHOBTB2
FLNB
SPO11
SERP1
EIF2A
PXDC1
GPSM3
SH3PXD2B
ALDH3A1
SEC16B
KPRP
HBP1
EPB41L4B
WIPI1
RNF122
CAMK2N1
DDX43
SRSF7
CDK5RAP2
ZNF277
DOCK4
CRYGS
GET3
ST6GALNAC1
SEMA6A
KRTAP15-1
CRCP
UFD1
CDC45
EIF3F
MALT1
TPM4
MAB21L4
H2AZ2
EBAG9
TPGS1
PHF3
TUBG1
RETREG3
MSRB3
TADA1
UBQLN4
LAMTOR2
SDCCAG8
CEP170
SENP8
MYO9A
GOLIM4
BNIP2
OSBPL1A
EP300
PELI1
CCAR1
RPS6KA2
TANC1
GAL3ST4
GPX6
CADPS
KRT6B
ZSCAN31
SH3PXD2A
ACSS3
COL1A2
TOMM40
CDC7
PRCC
MCC
UBE2G1
CLDN24
CLDN22
ABHD12B
NXPE2
WDR74
FRY
OIT3
FLACC1
CD2BP2
RPL23A
RAB34
PLA2G6
NLK
WDFY2
PSME2
EMC9
MNT
RNF31
MYO1B
STAP2
MPND
OR4C6
VEZT
FGD6
NUPR1
TBXT
RARB
MOSPD3
GP5
COX8A
GORASP2
HSPA13
NKIRAS1
OARD1
NFYA
SLC25A25
NR1D2
TMEM60
PHTF2
ZBED5
TTC23L
ARHGAP42
TSPAN13
MEGF9
UBALD2
INTS4
C2orf73
CLCN4
C7
IQCA1L
H2BE1
ADAM8
ADAMTS19
MTMR11
NME7
BLZF1
LGALS3BP
CENPC
IGSF10
RDH5
BLOC1S1
PAFAH2
ZBTB8OS
RBBP4
FBRS
DNAAF1
ZNF8
ASCL4
EGFR
KCNK15
HOXA3
FRG2
CDC14B
ADGRL1
CYTH1
ATL1
CIART
SERPINB8
NBPF11
RNF19B
DEDD
CDR2
EEF1A1
BAIAP2
MMP10
GTF2H4
EEF1AKNMT
HNRNPA0
LSM10
TGM3
MEA1
KLHDC3
SNRPC
ZNF708
STK32B
AKAP10
CLDN16
NBPF12
BACE2
APTX
DNAJA1
NFYC
FEM1A
ASPM
PNRC1
BAZ2A
PCNP
ATR
RAPGEFL1
MAT1A
RAI1
MIA3
TIMM10
HILPDA
FRG2C
KIAA1217
SLCO1A2
STK32C
LRRC27
EID1
GZMA
RFFL
CKAP5
WBP2
OR2AE1
REST
SOX2
NES
TMPRSS11E
DPPA5
ARHGEF38
METTL11B
DNMBP
MTRNR2L8
ZNF483
AGO1
DUSP6
TCF7L1
NRG1
RMND5B
ANKRD1
LRRN1
CD99L2
GOLGA6D
SFRP2
SOCS3
NTRK2
MTRNR2L1
GIMAP5
FAM222B
SPATA45
PF4
GDF11
PPBP
PHC1
SRRM4
SHCBP1L
BCOR
PRICKLE1
RPH3A
OBI1
SAMHD1
MTHFD1L
BTG2
OR5AR1
CLDN9
EDDM3B
POU5F1
SLTM
FLAD1
ZSWIM3
ACOT8
APOBEC3F
FBXW11
DNMT3B
TALDO1
ZFHX3
TDGF1
MED12
HESX1
SHISA5
SLC7A5
RASGRF2
ETS1
VENTX
ZNF398
MRPL20
NFE2L3
FGD3
UTF1
SCGB3A2
PSMD9
HPD
VCAN
NANOG
GOLGA6B
ZNF343
NCDN
KIAA0319L
COL23A1
TRAPPC8
GOLGA6A
FGD4
LEFTY2
LZTS1
CER1
USP44
DAGLB
IER5L
CELF4
CNPY1
TRIM24
FAM120B
MYSM1
FIGNL2
FGF2
FZD8
LIN28B
GPRC5B
MTRNR2L2
MSH3
DHFR
FBP1
PPP1R16B
GNAI2
PARP1
GOLGA6C
CYP2S1
IL34
SOX5
RIF1
SLA2
KIFBP
PLAGL1
LEFTY1
MRS2
FRAT2
SGMS2
SAMD5
BFSP1
GXYLT2
FBXO40