ChIP-Atlas: Target genes

Potential target genes for SOX2

Query protein: SOX2
Distance from TSS: ± 1 kb  ± 5 kb  ± 10 kb
Sort key: SRX359955 | LoVo
 
Color legends
  1000 750 500 250 1 0  (Values = Binding scores of MACS2 and STRING)

Download: TSV (text)
Links: Movie and Document for ChIP-Atlas Target Genes
SOX2's Target genes

◢ SOX2: Average

◢ SRX130061: BJ

◢ SRX10407083: Esophageal squamous carcinoma cell line

◢ SRX10407084: Esophageal squamous carcinoma cell line

◢ SRX5286338: ES cells

◢ SRX5286339: ES cells

◢ SRX5286342: ES cells

◢ SRX5286343: ES cells

◢ SRX11904439: H29

◢ SRX11904440: H29

◢ SRX6852812: HCC2814

◢ SRX277137: HCC95

◢ SRX6852810: HCC95

◢ SRX3205373: Head and neck squamous cell carcinoma 

◢ SRX702105: hESC derived mesendodermal cells

◢ SRX702106: hESC derived mesendodermal cells

◢ SRX702108: hESC derived mesendodermal cells

◢ SRX1047416: hESC derived neural cells

◢ SRX11919277: hESC derived neuromesodermal cells

◢ SRX011616: hESC H1

◢ SRX1047413: hESC H9

◢ SRX277140: hESC H9

◢ SRX6101128: hESC H9

◢ SRX6101129: hESC H9

◢ SRX266860: hESC HUES64

◢ SRX266861: hESC HUES64

◢ SRX702107: hESC HUES64

◢ SRX702109: hESC HUES64

◢ SRX20532164: hESC HUES8

◢ SRX20532165: hESC HUES8

◢ SRX5286340: hESC WIBR2

◢ SRX5286341: hESC WIBR2

◢ SRX5286344: hESC WIBR2

◢ SRX10101684: hESC WIBR3

◢ SRX10101685: hESC WIBR3

◢ SRX8026053: hESC WIBR3

◢ SRX8026055: hESC WIBR3

◢ SRX968908: iPSC derived neural cells

◢ SRX968909: iPSC derived neural cells

◢ SRX968910: iPSC derived neural cells

◢ SRX968911: iPSC derived neural cells

◢ SRX968912: iPSC derived neural cells

◢ SRX1813586: iPS cells

◢ SRX1813587: iPS cells

◢ SRX20140858: iPS cells

◢ SRX20140859: iPS cells

◢ SRX512370: iPS cells

◢ SRX6852811: KNS-62

◢ SRX10035162: KYSE-140

◢ SRX10407085: KYSE-70

◢ SRX277131: KYSE-70

◢ SRX6852808: LK-2

◢ SRX6852813: LK-2

◢ SRX6852814: LK-2

◢ SRX026880: LN-229

◣ SRX359955: LoVo

◢ ERX2260038: Lung cancer

◢ ERX2260040: Lung cancer

◢ ERX2260044: Lung cancer

◢ ERX2260046: Lung cancer

◢ SRX2731713: Lung cancer cell line

◢ SRX6750797: MDA-MB-231

◢ SRX6750798: MDA-MB-231

◢ SRX1813580: MRC-5

◢ SRX1813581: MRC-5

◢ SRX1813582: MRC-5

◢ SRX1813583: MRC-5

◢ SRX1813584: MRC-5

◢ SRX1813585: MRC-5

◢ SRX2732210: MRC-5

◢ SRX2732211: MRC-5

◢ SRX5771664: N2102Ep

◢ SRX5771666: N2102Ep

◢ SRX5771668: N2102Ep

◢ SRX11904443: NCI-H1836

◢ SRX11904444: NCI-H1836

◢ SRX6852809: NCI-H520

◢ SRX11904441: NCI-H82

◢ SRX11904442: NCI-H82

◢ SRX10445285: Neural crest cells

◢ SRX10445293: Neural crest cells

◢ SRX10445303: Neural crest cells

◢ SRX10445312: Neural crest cells

◢ SRX20140860: Neural progenitor cells

◢ SRX20140861: Neural progenitor cells

◢ SRX20140862: Neural progenitor cells

◢ SRX20140890: Neural progenitor cells

◢ SRX20140891: Neural progenitor cells

◢ SRX20140892: Neural progenitor cells

◢ SRX5716451: Neural progenitor cells

◢ SRX5716452: Neural progenitor cells

◢ SRX5716453: Neural progenitor cells

◢ SRX330107: ReN-VM

◢ SRX330108: ReN-VM

◢ SRX277134: T.T

◢ SRX3367070: TE-5

◢ SOX2: STRING

DNM2
ARRDC4
EIF2AK3
SP1
MTRNR2L8
NDUFS7
RGPD1
RGPD2
MTRNR2L2
MSH3
DHFR
STIP1
LRCH4
FBXO24
PLEKHG2
CIC
HNRNPC
POLG
ZSWIM4
DOLPP1
EVI5L
SARNP
ORMDL2
KHSRP
LTA4H
RFX1
SLC25A42
RAB5B
SP2
TEPSIN
NDUFAF8
BORCS6
GOT1
P4HB
TOM1L2
DRC3
G3BP1
CNOT1
ZNF687
MPV17L2
KATNB1
DCAF7
ATP5F1B
GATAD2A
ARID4A
HNRNPL
PWWP2A
SLX1B
SLX1A
BOLA2B
BOLA2
ANP32A
KMT5C
TMEM60
PHTF2
ZNF143
ZNF839
MYLPF
TBC1D10B
FRG2
CAMTA1
SCAMP4
ADAT3
NLK
GLRX5
FRYL
MCM5
H2AZ2
LAPTM4A
MRPL34
DDA1
ATF7-NPFF
ATF7
SPAG7
KCTD7
PODNL1
DCAF15
GOLPH3L
CREB3L2
TPCN1
IQCD
HDGFL2
HMGCS1
FAM72C
SRGAP2B
FAM72D
SEL1L
ENSA
MAMDC2
ABHD2
ATG9B
ABCB8
BOLA2-SMG1P6
SLC26A2
ZBTB32
STAP2
MPND
ARNTL
GLCCI1
SFXN5
POLR3E
TOMM40
TIA1
AGFG2
RAB11B
ZBTB5
OS9
RECQL
GOLT1B
BPGM
DENR
RAB11A
PCLAF
DCTN4
EIF4A1
RFWD3
SLC2A8
KAT6B
KDM4B
SHF
TRIM7
CYTH2
TRIP10
GPR108
COPZ1
HSP90B1
H4C8
COX5A
STT3A
CNOT3
UBE2C
MRPL45
PITPNM1
MED24
TROAP
MTRNR2L1
WBP1
INO80B
GPR84
GRK6
PRUNE1
MINDY1
PPP6R3
PSPN
ALKBH7
CCNT1
OSBP
ZNF564
ARL17B
ARL17A
WDR97
MAF1
PDCL
TSKS
AP2A1
KLHL7
CUTC
COX15
CALCOCO1
RPS29
SMARCC2
COL23A1
TYK2
KNL1
ILF2
C8orf37
ATP5MC1
DCT
LUC7L2
FMC1-LUC7L2
FMC1
MYH9
TOM1
NRARP
MTF2
SMARCA2
REST
CDX2
SOX2
FAM227A
CBY1
NES
NAV2
TMPRSS11E
SACS
DPPA5
SOX6
PIPOX
ARHGEF38
DUX4
METTL11B
DNMBP
ZNF483
NDUFB5
MRPL47
MUC1
ID3
HMGB1
FRG2C
ZSCAN2
LFNG
CACHD1
AGO1
DUSP6
TCF7L1
PTMA
NRG1
RMND5B
ANKRD1
LRRN1
HDAC9
CD99L2
GOLGA6D
SFRP2
SOCS3
NTRK2
IFRD1
GIMAP5
FGF1
FAM222B
SPATA45
PF4
GDF11
PPBP
PHC1
SRRM4
SHCBP1L
BCOR
PRICKLE1
LMCD1
SNRPN
MFSD4B
RPH3A
OBI1
SAMHD1
MTHFD1L
MED25
FUZ
BTG2
OR5AR1
CLDN9
SMCO1
EDDM3B
POU5F1
GAD2
SLTM
FLAD1
ZSWIM3
ACOT8
NOTCH1
APOBEC3F
FBXW11
DNMT3B
PLPP2
ARID2
TALDO1
DDX17
ZFHX3
ZNF608
GSN
TDGF1
MED12
HESX1
SHISA5
ETV1
SLC7A5
RIIAD1
ZNF775
RASGRF2
ETS1
VENTX
ZNF398
MRPL20
PMEPA1
NADK
NFE2L3
FGD3
UTF1
SCGB3A2
PSMD9
HPD
VCAN
DDX43
NANOG
ETV4
CELF3
GOLGA6B
WFDC8
ZNF343
NCDN
KIAA0319L
CYP1A1
TRAPPC8
GOLGA6A
FGD4
FZR1
LEFTY2
LZTS1
NRCAM
PHF5A
ACO2
RCN1
FGFR2
CER1
GADD45G
USP44
DAGLB
IER5L
CELF4
CNPY1
TRIM24
FAM120B
MYSM1
HES3
FIGNL2
FGF2
FZD8
LIN28B
GPRC5B
KMT2B
FBP1
PPP1R16B
ICMT
GPSM3
GNAI2
PARP1
SNURF
GOLGA6C
CYP2S1
IL34
IQCH
AAGAB
ESRP1
MCCC1
SOX5
FBXL19
RIF1
SLA2
CDC42EP3
KIFBP
PER2
PLAGL1
LEFTY1
MRS2
FRAT2
SGMS2
SAMD5
AMN1
ITPRIP
BFSP1
GXYLT2
TMCC1
FBXO40
PRDM14
PALM2AKAP2
FZD2
TRIM2
FOXP1
HGS
ARL16
MACROH2A1
TRIP4
RASA1
ZFC3H1
THAP2
SNAPC3
HOXD13
HOXD12
CCDC169-SOHLH2
CCDC169
DHDDS
DND1
LRRTM3
WNT5B
SLC35A5
ATG3
LIPK
ZNF532
CRYGB
JPT1
PDPN
MDN1
LIMCH1
CCT2
LINGO1
SPRY4
GJA1
SCAF4
TRIML2
ECE1
CEP41
APOBEC3D
APOBEC3C
CAPRIN1
SLC2A14
TNRC18
MAD2L2
NDUFS5
RFX4
PREX2
SOX14
PRR15
SPIC
ECT2
WBP1L
ST18
DHX32
SYT2
LOC100129484
POSTN
VWCE
UNC13B
CDC14B
TUBB
MDC1
EEF1A1
CD24
DGLUCY
BEND3
PCBP1
CHFR
VOPP1
PIN4
FAM180A
DCAF4L1
AASS
ZNF436
HMOX1
TGIF2-RAB5IF
TGIF2
TMC5
ONECUT2
SALL3
GDF3
ALDH1A2
MTM1
DRAXIN
DDR1
ZNF335
ITGB5
DLL1
TES
KCNN2
LRRTM4
ARIH1
L1TD1
WDFY2
TIMP4
FAM200B
GET3
ZSCAN10
FOXD1
SH3BP4
CARHSP1
DPH6
GABRQ
MAST4
OLFML3
KDM2A
WDHD1
SOCS4
SRCIN1
SRSF7
NEBL
RTN4
ADA2
STK31
HBG2
TJP2
ZNF781
IFT80
DDX3X
TBC1D16
CHN2
MOG
TIAM2
ITGB3
RGS3
ISOC2
TGIF1
CCDC130
PEAK1
HMG20A
PUF60
ZNF304
SORBS2
KDM2B
SENP2
MMACHC
CCDC163
PYCR2
SYN3
SLC39A8
RBFOX2
PGPEP1
DST
TTYH1
SASH1
PGK1
AK4
CACNA2D1
TNC
SINHCAF
EXT1
C8orf58
AHCYL2
USP7
DUSP12
GCNT2
ADAR
WDR49
C1orf127
SLC46A1
PTAR1
PLEKHG1
UNK
AEBP2
H3-3B
PNRC1
GTF2I
KCNJ1
AKIRIN2
ALDH7A1
LYPD6B
C10orf95
LMNA
OAZ2
PXMP4
NDST1
ACVR1
EMSY
DOK7
UGT1A6
C20orf96
ABCB5
GABRB3
SNX19
UFD1
CDC45
KDM3A
ZCCHC3
TNFSF8
TMEM47
NDUFV1
LRIG1
RTBDN
MAST1
CAPN3
PACSIN2
ZNF536
PDIA4
ANK2
FAM24B
CHD6
ZNF296
GEMIN7
CCN2
PSIP1
ABL2
PSME3IP1
VANGL2
RASAL2
NECTIN1
TRIB2
LIN28A
SIX2
FZD5
KLF3
PITPNM2
TPST2
TCF7L2
MYCL
SLC20A2
ZNF195
REV3L
ESR2
HES1
TIAM1
TESK2
INSM1
AASDH
SMAD3
PDE1B
AUH
UBAP2
ZNF875
PRODH
LOC102724788
ZBTB45
OSBPL1A
DIDO1
SLC33A1
HHIP
MARCKS
CCL26
MVB12A
KRT8
GLDC
ZNF600
F11R
NDUFAB1
TSPAN14
PRKAG2
SLC25A36
ZNF649
FOXO6
NPSR1
PPP2R3A
MSANTD4
DPPA4
SLFN12
ATP6V1G1
ZNF664-RFLNA
ZNF664
CCDC92
BCL9
RPL8
TRPC4AP
SLC3A2
ZNF565
NTN5
SMIM14
DISP3
SLC23A2
TFE3
MAGEB2
CDH10
TMEM43
DICER1
CHCHD4
PGBD5
NEUROG3
SUCO
TRPM1
SAPCD2
PXDC1
LIMK2
CNOT11
MUS81
CFL1
CHMP7
VASH2
KLF7
PRRC2B
H3C15
H3C14
H2AC19
H2AC18
LRAT
NUP160
SOAT1
SPHK1
WDR36
RNASE9
CDYL
TLE1
TFAP2A
TET3
ESX1
PYGB
ZSCAN9
BIN2
FAM20A
SLC16A13
ABCC10
FAM153B
TNRC6A
OR2T1
EPB41L1
KLF6
TMUB2
MTHFD1
MMP10
B3GALT5
STOX2
ZNF428
LRRC47
BFAR
ZBTB18
VPS37B
WDR74
CRISPLD1
CFLAR
CFAP20
PDGFA
LRTM1
DTNA
MAP6
KLF5
ACSL1
SORT1
ID1
TNFRSF6B
SELPLG
PIK3R3
BCAT1
INO80D
OGA
CSF2RB
BRINP2
NXPH2
YIPF4
PREP
CNGA1
PAK1
KRTAP3-1
ETV6
STMN1
PLPP3
CPT1A
CTNNA1
LRRTM2
KCNIP4
ZNF517
GAST
CCDC85A
S100A16
GSAP
GPC4
DPP3
TRMT2A
RANBP1
RMND1
ARMT1
ADAMTS16
ARHGAP42
ZNF202
SACM1L
PIK3C2A
LRGUK
ACOXL
BBC3
DACT3
RFLNA
ABCC2
PNCK
APOBEC3G
UBQLN4
LAMTOR2
DEFB114
DEFB113
ZNF814
F11
HSPH1
POLB
ZMAT2
CXADR
CELSR3
TKT
SYNCRIP
NIPAL1
CTNND2
PIF1
IFI16
DHX8
GLI2
SAXO1
TACC2
MEX3D
EPHB3
BAHCC1
PTPRN
ACSL6
EXOSC9
CD2BP2
DHRS3
ZFP3
HES5
PANK4
TP53
HMGN1
ANAPC15
CSRNP2
YAF2
MRPL18
TOX3
NUAK1
SLAMF1
SDCBP
NWD1
KNTC1
TRDMT1
ADGRL2
PLEKHB1
OSBPL2
SHC3
ERMN
MBOAT2
HOXB1
SDHC
SH3GL3
SALL4
ESRRA
CATSPERZ
CAAP1
DNAJC7
PSME2
GADD45A
TRIM13
CP
ARSL
MYEOV
PAFAH2
ERBB2
TIAL1
SLCO5A1
PLCH1
LYPLAL1
MEIS2
ISL2
C22orf39
VEZT
UPF1
FGD6
SPTLC2
ANKRD6
CD200
ASIP
OR6C3
LLGL1
SLC6A8
AJAP1
RABGAP1L
EMC9
TUT1
NKIRAS2
CCDC200
SLC25A11
RNF167
SNAP23
EPHA4
STRA6
GALNT8
DCLK1
LONRF3
TLX3
RAB30
YLPM1
PPME1
C2CD3
WASF1
CDC40
TMEM107
DDX39A
LEKR1
AIRE
ARID5A
TBC1D23
DPYSL3
TLE3
AFF1
SDCCAG8
PIMREG
CEP170
ABLIM1
PPP1R18
NRM
KLHL24
ST6GAL1
CNMD
PGAP3
CAPZB
IL7R
TSPAN5
ZFYVE1
SPATC1L
TLL2
CCL2
MSL2
RNF43
CTBP2
RAB23
SRP68
NEDD9
ZNF140
SLC10A2
TPCN2
RNF213
TCHP
FOXN3
OCSTAMP
ERGIC2
C1QTNF7
PTPN12
SLC25A16
SYBU
NACAD
CHD7
GUCA1A
HELLS
KRBA2
CNR2
ZBTB40
GCSAM
HSBP1L1
RBM20
EXOC7
DTX2
ITPK1
CTTNBP2NL
ITGB1
NEPRO
JUP
ZFAND3
CCDC33
DUSP29
SFPQ
GABBR1
MIDEAS
PRAC2
PRAC1
TCF4
SP5
SNX16
CEP63
ANAPC13
RARB
SPATA22
RAD54B
KIAA1522
LNX1
ARMC12
STK32C
LRRC27
ZNF552
GOLGB1
ZNF627
H4C15
H4C14
AP2B1
SET
PROM1
SMAGP
FAM181A
RAPGEF5
TAGLN3
CHCHD3
NCOA7
MATR3
PHLDB2
RRAGA
MEF2C
CCDC88C
ETFB
RAB17
ZDHHC5
LGR6
TP53INP1
RAX
ANKRD40
IL17RD
ASH2L
IFIT3
NKX2-2
TMEFF1
RPL27
LYPD1
CACNA1S
YEATS2
SPATA12
EGR3
SCOC
CLCF1
GJA10
ALDH2
TCAF1
LHFPL4
THEM4
EP300
NATD1
ERVH48-1
PCDHB8
CCDC167
LCOR
PES1
ROR1
PRND
NARF
ARSG
PCYT1B
KIAA0895L
HEXIM2
CDC25A
TMX2
MED19
PRKCA
NKX1-2
PEA15
AKIRIN1
ADRM1
VSIG10
NCBP2AS2
NCBP2
ACCS
GDF5
ZFAND6
RNF19A
DNAJB1
GABPB2
GLIPR2