ChIP-Atlas: Target genes

Potential target genes for SOX2

Query protein: SOX2
Distance from TSS: ± 1 kb  ± 5 kb  ± 10 kb
Sort key: SRX330107 | ReN-VM
 
Color legends
  1000 750 500 250 1 0  (Values = Binding scores of MACS2 and STRING)

Download: TSV (text)
Links: Movie and Document for ChIP-Atlas Target Genes
SOX2's Target genes

◢ SOX2: Average

◢ SRX130061: BJ

◢ SRX10407083: Esophageal squamous carcinoma cell line

◢ SRX10407084: Esophageal squamous carcinoma cell line

◢ SRX5286338: ES cells

◢ SRX5286339: ES cells

◢ SRX5286342: ES cells

◢ SRX5286343: ES cells

◢ SRX11904439: H29

◢ SRX11904440: H29

◢ SRX6852812: HCC2814

◢ SRX277137: HCC95

◢ SRX6852810: HCC95

◢ SRX3205373: Head and neck squamous cell carcinoma 

◢ SRX702105: hESC derived mesendodermal cells

◢ SRX702106: hESC derived mesendodermal cells

◢ SRX702108: hESC derived mesendodermal cells

◢ SRX1047416: hESC derived neural cells

◢ SRX11919277: hESC derived neuromesodermal cells

◢ SRX011616: hESC H1

◢ SRX1047413: hESC H9

◢ SRX277140: hESC H9

◢ SRX6101128: hESC H9

◢ SRX6101129: hESC H9

◢ SRX266860: hESC HUES64

◢ SRX266861: hESC HUES64

◢ SRX702107: hESC HUES64

◢ SRX702109: hESC HUES64

◢ SRX20532164: hESC HUES8

◢ SRX20532165: hESC HUES8

◢ SRX5286340: hESC WIBR2

◢ SRX5286341: hESC WIBR2

◢ SRX5286344: hESC WIBR2

◢ SRX10101684: hESC WIBR3

◢ SRX10101685: hESC WIBR3

◢ SRX8026053: hESC WIBR3

◢ SRX8026055: hESC WIBR3

◢ SRX968908: iPSC derived neural cells

◢ SRX968909: iPSC derived neural cells

◢ SRX968910: iPSC derived neural cells

◢ SRX968911: iPSC derived neural cells

◢ SRX968912: iPSC derived neural cells

◢ SRX1813586: iPS cells

◢ SRX1813587: iPS cells

◢ SRX20140858: iPS cells

◢ SRX20140859: iPS cells

◢ SRX512370: iPS cells

◢ SRX6852811: KNS-62

◢ SRX10035162: KYSE-140

◢ SRX10407085: KYSE-70

◢ SRX277131: KYSE-70

◢ SRX6852808: LK-2

◢ SRX6852813: LK-2

◢ SRX6852814: LK-2

◢ SRX026880: LN-229

◢ SRX359955: LoVo

◢ ERX2260038: Lung cancer

◢ ERX2260040: Lung cancer

◢ ERX2260044: Lung cancer

◢ ERX2260046: Lung cancer

◢ SRX2731713: Lung cancer cell line

◢ SRX6750797: MDA-MB-231

◢ SRX6750798: MDA-MB-231

◢ SRX1813580: MRC-5

◢ SRX1813581: MRC-5

◢ SRX1813582: MRC-5

◢ SRX1813583: MRC-5

◢ SRX1813584: MRC-5

◢ SRX1813585: MRC-5

◢ SRX2732210: MRC-5

◢ SRX2732211: MRC-5

◢ SRX5771664: N2102Ep

◢ SRX5771666: N2102Ep

◢ SRX5771668: N2102Ep

◢ SRX11904443: NCI-H1836

◢ SRX11904444: NCI-H1836

◢ SRX6852809: NCI-H520

◢ SRX11904441: NCI-H82

◢ SRX11904442: NCI-H82

◢ SRX10445285: Neural crest cells

◢ SRX10445293: Neural crest cells

◢ SRX10445303: Neural crest cells

◢ SRX10445312: Neural crest cells

◢ SRX20140860: Neural progenitor cells

◢ SRX20140861: Neural progenitor cells

◢ SRX20140862: Neural progenitor cells

◢ SRX20140890: Neural progenitor cells

◢ SRX20140891: Neural progenitor cells

◢ SRX20140892: Neural progenitor cells

◢ SRX5716451: Neural progenitor cells

◢ SRX5716452: Neural progenitor cells

◢ SRX5716453: Neural progenitor cells

◣ SRX330107: ReN-VM

◢ SRX330108: ReN-VM

◢ SRX277134: T.T

◢ SRX3367070: TE-5

◢ SOX2: STRING

PMF1-BGLAP
PMF1
COL23A1
MAMDC2
NGB
CYP4F11
SCML1
OPRL1
LKAAEAR1
FRG2
FAH
MTF2
EPN1
SNX16
ATXN2L
SACS
FAM240C
TMEM216
SKIDA1
LOC105370980
OSBPL2
OR2T1
C1orf198
FRG2C
GPSM3
TTYH1
GADD45G
UCKL1
CAMTA1
MUC1
LFNG
HMGB1
LRP2
PPP1R15B
NRARP
SPIN1
HDAC9
STK32C
LRRC27
APBB2
ONECUT2
CAPRIN1
CSRNP2
GTPBP6
ARID2
PDE4B
BZW2
ANKMY2
FABP7
CORO2B
HES5
PANK4
PLEKHB1
ITPK1
LGR6
SLC6A9
NES
HNRNPDL
ENOPH1
KLF7
HMGN1
CCNG2
KRTAP4-12
FAM120B
DLL1
ACSL6
CITED2
CRYAA2
CRYAA
ARIH1
LOC100996750
KRTAP4-7
KDELR1
GRIN2D
RB1
RGR
LRIT1
ALDH7A1
OAZ2
ACSL1
KRTAP9-7
SLC7A5
FAM181A
BMF
DUX4
ZNF775
RTN4
TSPAN13
CDH11
KRTAP4-11
MEX3D
KRTAP4-4
CDC34
RUBCNL
SMIM38
DNMBP
DDX17
IQCH
AAGAB
ITPRIP
LRTM1
HBP1
FGFRL1
MTDH
IFIT1B
ARHGAP11A-SCG5
ARHGAP11A
CTAGE8
CTAGE4
OR8U8
OR8U1
LPP
PCBP4
BCL9L
AGO1
GADD45A
NDRG2
TPPP2
ZNF277
DOCK4
VANGL2
CDK5R1
CNOT3
FMNL3
CRIP2
CTAGE15
SHF
TUBA1C
APC2
NEU4
ATAT1
ZNF717
PHF24
ENO1
POTEH
KRTAP1-1
PYCR2
ARHGEF2
ADRM1
SIPA1L1
PTPRK
KLHDC8A
PNRC2
RHOJ
CDC27
STX6
FOXJ1
CXXC5
PAQR6
ANKRD6
FRG1
KRTAP2-4
LINGO1
GALR1
HIVEP3
KRTAP4-5
TRIB1
CLEC19A
PLXNA2
GP6
FZD9
HES6
ADGRB2
KRTAP4-6
PCDHB5
ZNF358
TEAD2
DKKL1
RAB6B
RALGDS
KRTAP2-1
NDUFB5
MRPL47
KDM2A
RGS3
LRIG1
ADNP
NFIB
NCOA4
STAU2
TMPRSS5
C16orf46
MARCKS
KIF21A
PTMA
LRRN1
MED25
FUZ
TP53INP1
UBTD2
KLF12
KCNQ3
PIPOX
WDR74
ESRRA
CATSPERZ
ZSWIM4
GABRR2
SLC29A1
MYMX
ATN1
ANKRD18B
DDR1
CRB2
NUDT19
OR2A7
KRTAP4-8
TNRC18
LOC100129484
RIPOR3
TRAF3IP2
KRTAP2-3
KRTAP2-2
HES3
C1orf127
PTGS1
TMEM88B
TMEM114
INMT
OTOP1
OSGIN1
FAM227A
CBY1
LMCD1
FGFR2
VOPP1
PREP
CCDC88A
TTYH2
CDK5RAP2
LMO3
ITGB8
EIF4A2
NREP
PHYHIPL
ENTPD2
EHF
VPS4A
STAG3
GPC2
AMMECR1L
TRMT2A
RANBP1
TRAPPC3
MAP7D1
ZBTB25
ZBTB1
CTAGE9
TAS2R41
TMEM132A
CNDP2
KRTAP4-9
GFAP
PAX6
IL2RB
CCSER1
PIGQ
NHLRC4
PLCG1
CD24
FGD3
MTRNR2L2
MSH3
DHFR
SNAPC3
LIMCH1
TCF7L2
HSPH1
TRDMT1
DDX5
POU2F1
PLEKHG2
SRSF6
CLEC18B
KANK1
MAP2K4
GAR1
C21orf91
UGT1A7
LZTS1
RNF44
PFKFB3
GPAT4
TMCC2
MLPH
TCTEX1D4
ATXN7L2
PLK3
KRTAP21-2
CTDP1
MIDN
CLEC18A
PLCB4
SLC43A2
PTTG1IP
DYRK1B
FRAT1
UQCRC1
CNN3
ZNF763
CTAGE6
SLC3A2
AGRN
PLXNB1
IRAG1
KRTAP9-6
CDK2AP1
TJAP1
OR4F17
MEGF9
DNAH1
TEPP
OR56A1
SOX6
SRSF7
CHD6
ZNF195
ABAT
LTBP1
UBE2E3
CREBZF
PCDHA5
ARNT2
PCDHA6
KRTAP9-8
BCL2L10
SPAAR
SHTN1
RASSF4
CASTOR2
NELFCD
UNC13D
NIN
ACSS1
MAN2B2
POLR3E
FAM102A
SLIT1
ZSCAN2
VSTM2L
KRTAP1-3
KRTAP1-4
MYOG
OR4F4
ZFC3H1
THAP2
FOXD1
ACVR1
PDIA4
OSBPL1A
ZSCAN9
POLB
IFI16
TCF4
RGPD1
PDP1
PYDC5
KAT6A
FSCN1
ST7
RBPJ
TNFRSF11B
COLEC10
ADO
ZNF606
IFI27
SFXN5
USP22
TCF7L1
PIMREG
EEF2K
PCDHB11
LOC647264
POLDIP3
TUBB
MDC1
ID2
TEX2
TMEFF1
ARF4
SENP8
MYO9A
RSF1
AAMDC
TMPRSS7
PTPRD
LMO4
NSUN6
ARL5B
OTUD7B
SPATA13
CXCR4
LMO2
SLC16A9
KRTAP1-5
SIK3
ZCCHC24
CARHSP1
NFE2L1
COX20
SCD
DST
THEM4
FILIP1L
ZNF250
NR2F1
MAPK10
SYNRG
HOXC9
ANP32E
SMARCA2
REST
CDX2
SOX2
NAV2
TMPRSS11E
DPPA5
ARHGEF38
METTL11B
MTRNR2L8
ZNF483
ID3
CACHD1
DUSP6
NRG1
RMND5B
ANKRD1
CD99L2
GOLGA6D
SFRP2
SOCS3
NTRK2
MTRNR2L1
IFRD1
GIMAP5
FGF1
FAM222B
SPATA45
PF4
GDF11
PPBP
PHC1
SRRM4
SHCBP1L
BCOR
PRICKLE1
SNRPN
MFSD4B
RPH3A
OBI1
SAMHD1
MTHFD1L
BTG2
OR5AR1
CLDN9
SMCO1
EDDM3B
POU5F1
GAD2
GRK6
SLTM
FLAD1
ZSWIM3
ACOT8
NOTCH1
APOBEC3F
FBXW11
DNMT3B
PLPP2
TALDO1
ZFHX3
ZNF608
GSN
TDGF1
MED12
HESX1
SHISA5
ETV1
RIIAD1
RASGRF2
ETS1
VENTX
ZNF398
MRPL20
PMEPA1
NADK
NFE2L3
UTF1
SCGB3A2
PSMD9
HPD
VCAN
DDX43
NANOG
ETV4
CELF3
GOLGA6B
WFDC8
ZNF343
NCDN
KIAA0319L
CYP1A1
TRAPPC8
GOLGA6A
FGD4
FZR1
LEFTY2
NRCAM
PHF5A
ACO2
RCN1
CER1
USP44
DAGLB
IER5L
CELF4
CNPY1
TRIM24
MYSM1
FIGNL2
FGF2
FZD8
LIN28B
GPRC5B
KMT2B
FBP1
PPP1R16B
ICMT
GNAI2
PARP1
SNURF
CYTH2
GOLGA6C
CYP2S1
IL34
ESRP1
MCCC1
SOX5
FBXL19
RIF1
SLA2
CDC42EP3
KIFBP
PER2
PLAGL1
LEFTY1
MRS2
FRAT2
SGMS2
SAMD5
AMN1
BFSP1
GXYLT2
TMCC1
FBXO40
PRDM14
PALM2AKAP2
FZD2
TRIM2
FOXP1
HGS
ARL16
MACROH2A1
TRIP4
RASA1
HOXD13
HOXD12
CCDC169-SOHLH2
CCDC169
DHDDS
DND1
LRRTM3
WNT5B
SLC35A5
ATG3
LIPK
ZNF532
CRYGB
JPT1
PDPN
MDN1
CCT2
SPRY4
GJA1
SCAF4
TRIML2
ECE1
CEP41
APOBEC3D
APOBEC3C
SLC2A14
MAD2L2
NDUFS5
RFX4
PREX2
SOX14
PRR15
SPIC
ECT2
WBP1L
ST18
DHX32
SYT2
PDCL
POSTN
VWCE
UNC13B
CDC14B
EEF1A1
DGLUCY
BEND3
PCBP1
CHFR
PIN4
FAM180A
DCAF4L1
AASS
ZNF436
HMOX1
TGIF2-RAB5IF
TGIF2
TMC5
SALL3
GDF3
ALDH1A2
MTM1
DRAXIN
ZNF335
ITGB5
TES
KCNN2
LRRTM4
PCLAF
L1TD1
WDFY2
TIMP4
FAM200B
GET3
ZSCAN10
SH3BP4
DPH6
GABRQ
MAST4
OLFML3
WDHD1
SOCS4
SRCIN1
NEBL
ADA2
STK31
HBG2
TJP2
ZNF781
IFT80
DDX3X
TBC1D16
CHN2
MOG
DENR
TIAM2
ITGB3
ISOC2
TGIF1
CCDC130
PEAK1
HMG20A
PUF60
ZNF304
SORBS2
KDM2B
SENP2
MMACHC
CCDC163
SYN3
SLC39A8
RBFOX2
PGPEP1
SASH1
PGK1
AK4
CACNA2D1
TNC
SINHCAF
EXT1
C8orf58
AHCYL2
USP7
DUSP12
GCNT2
ADAR
WDR49
SLC46A1
PTAR1
PLEKHG1
UNK
TSKS
AP2A1
AEBP2
H3-3B
PNRC1
GTF2I
KCNJ1
AKIRIN2
TOMM40
LYPD6B
C10orf95
LMNA
PXMP4
NDST1
EMSY
DOK7
UGT1A6
C20orf96
ABCB5
GABRB3
SNX19
UFD1
CDC45
KDM3A
ZCCHC3
TNFSF8
TMEM47
NDUFV1
RTBDN
MAST1
CAPN3
PACSIN2
ZNF536
ANK2
FAM24B
ZNF296
GEMIN7
CCN2
PSIP1
ABL2
PSME3IP1
RASAL2
NECTIN1
TRIB2
LIN28A
SIX2
FZD5
KLF3
PITPNM2
TPST2
MYCL
SLC20A2
REV3L
ESR2
HES1
TIAM1
TESK2
INSM1
AASDH
SMAD3
PDE1B
AUH
UBAP2
ZNF875
PRODH
LOC102724788
ZBTB45
DIDO1
SLC33A1
HHIP
CCL26
MVB12A
KRT8
GLDC
ZNF600
F11R
NDUFAB1
TSPAN14
PRKAG2
SLC25A36
ZNF649
FOXO6
NPSR1
PPP2R3A
MSANTD4
DPPA4
SLFN12
ATP6V1G1
ZNF664-RFLNA
ZNF664
CCDC92
BCL9
RPL8
TRPC4AP
ZNF565
NTN5
SMIM14
DISP3
SLC23A2
TFE3
MAGEB2
CDH10
TMEM43
DICER1
CHCHD4
PGBD5
NEUROG3
SUCO
TRPM1
SAPCD2
PXDC1
LIMK2
CNOT11
MUS81
CFL1
CHMP7
VASH2
PRRC2B
H3C15
H3C14
H2AC19
H2AC18
LRAT
NUP160
SOAT1
SPHK1
WDR36
RNASE9
CDYL
TLE1
TFAP2A
TET3
ESX1
PYGB
BIN2
FAM20A
SLC16A13
ABCC10
FAM153B
TNRC6A
EPB41L1
KLF6
TMUB2
MTHFD1
MMP10
B3GALT5
STOX2
ZNF428
LRRC47
BFAR
ZBTB18
VPS37B
BORCS6
CRISPLD1
CFLAR
CFAP20
PDGFA
DTNA
MAP6
KLF5
SORT1
ID1
TNFRSF6B
SELPLG
PIK3R3
BCAT1
INO80D
OGA
CSF2RB
BRINP2
NXPH2
YIPF4
G3BP1
CNGA1
PAK1
KRTAP3-1
ETV6
STMN1
PLPP3
CPT1A
CTNNA1
LRRTM2
KCNIP4
ZNF517
GAST
CCDC85A
S100A16
GSAP
GPC4
DPP3
RMND1
ARMT1
ADAMTS16
ARHGAP42
ZNF202
SACM1L
PIK3C2A
LRGUK
ACOXL
BBC3
DACT3
RFLNA
ABCC2
PNCK
APOBEC3G
UBQLN4
LAMTOR2
DEFB114
DEFB113
ZNF814
F11
ZMAT2
CXADR
CELSR3
TKT
SYNCRIP
NIPAL1
CTNND2
PIF1
DHX8
GLI2
SAXO1
TACC2
EPHB3
BAHCC1
PTPRN
EXOSC9
CD2BP2
DHRS3
ZFP3
TP53
ANAPC15
YAF2
MRPL18
TOX3
NUAK1
SLAMF1
SDCBP
NWD1
KNTC1
ADGRL2
SHC3
ERMN
MBOAT2
HOXB1
SDHC
SH3GL3
SALL4
CAAP1
DNAJC7
PSME2
TRIM13
CP
ARSL
MYEOV
PAFAH2
ERBB2
TIAL1
SLCO5A1
PLCH1
LYPLAL1
MEIS2
ISL2
C22orf39
VEZT
UPF1
FGD6
SPTLC2
CD200
ASIP
OR6C3
LLGL1
SLC6A8
AJAP1
RABGAP1L
EMC9
TUT1
NKIRAS2
CCDC200
SLC25A11
RNF167
SNAP23
EPHA4
STRA6
GALNT8
DCLK1
LONRF3
TLX3
RAB30
YLPM1
PPME1
C2CD3
WASF1
CDC40
TMEM107
DDX39A
LEKR1
AIRE
ARID5A
TBC1D23
DPYSL3
TLE3
AFF1
SDCCAG8
CEP170