ChIP-Atlas: Target genes

Potential target genes for SOX2

Query protein: SOX2
Distance from TSS: ± 1 kb  ± 5 kb  ± 10 kb
Sort key: SRX968911 | iPSC derived neural cells
 
Color legends
  1000 750 500 250 1 0  (Values = Binding scores of MACS2 and STRING)

Download: TSV (text)
Links: Movie and Document for ChIP-Atlas Target Genes
SOX2's Target genes

◢ SOX2: Average

◢ SRX130061: BJ

◢ SRX10407083: Esophageal squamous carcinoma cell line

◢ SRX10407084: Esophageal squamous carcinoma cell line

◢ SRX5286338: ES cells

◢ SRX5286339: ES cells

◢ SRX5286342: ES cells

◢ SRX5286343: ES cells

◢ SRX11904439: H29

◢ SRX11904440: H29

◢ SRX6852812: HCC2814

◢ SRX277137: HCC95

◢ SRX6852810: HCC95

◢ SRX3205373: Head and neck squamous cell carcinoma 

◢ SRX702105: hESC derived mesendodermal cells

◢ SRX702106: hESC derived mesendodermal cells

◢ SRX702108: hESC derived mesendodermal cells

◢ SRX1047416: hESC derived neural cells

◢ SRX11919277: hESC derived neuromesodermal cells

◢ SRX011616: hESC H1

◢ SRX1047413: hESC H9

◢ SRX277140: hESC H9

◢ SRX6101128: hESC H9

◢ SRX6101129: hESC H9

◢ SRX266860: hESC HUES64

◢ SRX266861: hESC HUES64

◢ SRX702107: hESC HUES64

◢ SRX702109: hESC HUES64

◢ SRX20532164: hESC HUES8

◢ SRX20532165: hESC HUES8

◢ SRX5286340: hESC WIBR2

◢ SRX5286341: hESC WIBR2

◢ SRX5286344: hESC WIBR2

◢ SRX10101684: hESC WIBR3

◢ SRX10101685: hESC WIBR3

◢ SRX8026053: hESC WIBR3

◢ SRX8026055: hESC WIBR3

◢ SRX968908: iPSC derived neural cells

◢ SRX968909: iPSC derived neural cells

◢ SRX968910: iPSC derived neural cells

◣ SRX968911: iPSC derived neural cells

◢ SRX968912: iPSC derived neural cells

◢ SRX1813586: iPS cells

◢ SRX1813587: iPS cells

◢ SRX20140858: iPS cells

◢ SRX20140859: iPS cells

◢ SRX512370: iPS cells

◢ SRX6852811: KNS-62

◢ SRX10035162: KYSE-140

◢ SRX10407085: KYSE-70

◢ SRX277131: KYSE-70

◢ SRX6852808: LK-2

◢ SRX6852813: LK-2

◢ SRX6852814: LK-2

◢ SRX026880: LN-229

◢ SRX359955: LoVo

◢ ERX2260038: Lung cancer

◢ ERX2260040: Lung cancer

◢ ERX2260044: Lung cancer

◢ ERX2260046: Lung cancer

◢ SRX2731713: Lung cancer cell line

◢ SRX6750797: MDA-MB-231

◢ SRX6750798: MDA-MB-231

◢ SRX1813580: MRC-5

◢ SRX1813581: MRC-5

◢ SRX1813582: MRC-5

◢ SRX1813583: MRC-5

◢ SRX1813584: MRC-5

◢ SRX1813585: MRC-5

◢ SRX2732210: MRC-5

◢ SRX2732211: MRC-5

◢ SRX5771664: N2102Ep

◢ SRX5771666: N2102Ep

◢ SRX5771668: N2102Ep

◢ SRX11904443: NCI-H1836

◢ SRX11904444: NCI-H1836

◢ SRX6852809: NCI-H520

◢ SRX11904441: NCI-H82

◢ SRX11904442: NCI-H82

◢ SRX10445285: Neural crest cells

◢ SRX10445293: Neural crest cells

◢ SRX10445303: Neural crest cells

◢ SRX10445312: Neural crest cells

◢ SRX20140860: Neural progenitor cells

◢ SRX20140861: Neural progenitor cells

◢ SRX20140862: Neural progenitor cells

◢ SRX20140890: Neural progenitor cells

◢ SRX20140891: Neural progenitor cells

◢ SRX20140892: Neural progenitor cells

◢ SRX5716451: Neural progenitor cells

◢ SRX5716452: Neural progenitor cells

◢ SRX5716453: Neural progenitor cells

◢ SRX330107: ReN-VM

◢ SRX330108: ReN-VM

◢ SRX277134: T.T

◢ SRX3367070: TE-5

◢ SOX2: STRING

BFSP1
NES
NRARP
ITPRIP
NKX2-2
GXYLT2
IGFBP2
METTL11B
SACS
LRTM1
MTF2
PIK3C2A
PGPEP1
ALDH2
CAMTA1
PGK1
SOCS3
FAM227A
CBY1
DDX17
LFNG
PTPRZ1
MED25
FUZ
NOTCH1
OSBPL2
TP53INP1
DNMBP
GPSM3
DTNA
MS4A4A
DNMT3B
PAFAH2
TTYH1
MUC20
KDM2A
HDAC9
NR4A3
IQCH
AAGAB
WDR74
LMNA
MEX3A
SIRT4
C17orf77
TNP2
PRM3
PRM2
SSUH2
NGB
TNRC18
LOC100129484
ADAMTSL1
NFASC
OSBPL1A
GLIPR1
LRRN1
CRB2
RBM20
RIIAD1
CELF3
SORBS2
NDUFS5
EMID1
NEUROD1
SPHK1
FAM181A
FRRS1L
FSIP1
NDUFB5
MRPL47
MMP10
RGS3
DICER1
CRYBG2
SIK1B
SIK1
ABCB4
PRDM12
CHN2
LCOR
ITPK1
PLAGL1
POLDIP3
PIMREG
AIPL1
PTMA
C1orf127
FZD9
GFRA1
SRRM4
PLEKHB1
SYTL2
GPC4
TMPRSS9
UQCRHL
FAM107A
ID2
EEF1A1
GAS2L3
AGO1
ANKRD6
CTBP2
TSKS
AP2A1
C21orf62
PDE4B
SMARCA2
REST
CDX2
SOX2
NAV2
TMPRSS11E
DPPA5
SOX6
PIPOX
ARHGEF38
DUX4
MTRNR2L8
ZNF483
MUC1
ID3
HMGB1
FRG2C
ZSCAN2
CACHD1
DUSP6
TCF7L1
NRG1
RMND5B
ANKRD1
CD99L2
GOLGA6D
SFRP2
NTRK2
MTRNR2L1
IFRD1
GIMAP5
FGF1
FAM222B
SPATA45
PF4
GDF11
PPBP
PHC1
SHCBP1L
BCOR
PRICKLE1
LMCD1
SNRPN
MFSD4B
FRG2
RPH3A
OBI1
SAMHD1
MTHFD1L
BTG2
OR5AR1
CLDN9
SMCO1
EDDM3B
POU5F1
GAD2
GRK6
SLTM
FLAD1
ZSWIM3
ACOT8
APOBEC3F
FBXW11
PLPP2
ARID2
TALDO1
ZFHX3
ZNF608
GSN
TDGF1
MED12
HESX1
SHISA5
ETV1
SLC7A5
ZNF775
RASGRF2
ETS1
VENTX
ZNF398
MRPL20
PMEPA1
NADK
NFE2L3
FGD3
UTF1
SCGB3A2
PSMD9
HPD
VCAN
DDX43
NANOG
ETV4
GOLGA6B
WFDC8
ZNF343
NCDN
KIAA0319L
CYP1A1
COL23A1
TRAPPC8
GOLGA6A
FGD4
FZR1
LEFTY2
LZTS1
NRCAM
PHF5A
ACO2
RCN1
FGFR2
CER1
GADD45G
USP44
DAGLB
IER5L
CELF4
CNPY1
TRIM24
FAM120B
MYSM1
HES3
FIGNL2
FGF2
FZD8
LIN28B
GPRC5B
MTRNR2L2
MSH3
DHFR
KMT2B
FBP1
PPP1R16B
ICMT
GNAI2
PARP1
SNURF
CYTH2
GOLGA6C
CYP2S1
IL34
ESRP1
MCCC1
SOX5
FBXL19
RIF1
SLA2
CDC42EP3
KIFBP
PER2
LEFTY1
MRS2
FRAT2
SGMS2
SAMD5
AMN1
TMCC1
FBXO40
PRDM14
PALM2AKAP2
FZD2
TRIM2
FOXP1
HGS
ARL16
MACROH2A1
TRIP4
RASA1
ZFC3H1
THAP2
SNAPC3
HOXD13
HOXD12
CCDC169-SOHLH2
CCDC169
DHDDS
DND1
LRRTM3
WNT5B
SLC35A5
ATG3
LIPK
ZNF532
CRYGB
JPT1
PDPN
MDN1
LIMCH1
CCT2
LINGO1
SPRY4
GJA1
SCAF4
TRIML2
ECE1
CEP41
APOBEC3D
APOBEC3C
CAPRIN1
SLC2A14
MAD2L2
RFX4
PREX2
SOX14
PRR15
SPIC
ECT2
WBP1L
ST18
DHX32
SYT2
PDCL
POSTN
VWCE
UNC13B
CDC14B
TUBB
MDC1
CD24
DGLUCY
BEND3
PCBP1
CHFR
VOPP1
PIN4
FAM180A
DCAF4L1
AASS
ZNF436
HMOX1
TGIF2-RAB5IF
TGIF2
TMC5
ONECUT2
SALL3
GDF3
ALDH1A2
MTM1
DRAXIN
DDR1
ZNF335
ITGB5
DLL1
TES
KCNN2
LRRTM4
PCLAF
ARIH1
L1TD1
WDFY2
TIMP4
FAM200B
GET3
ZSCAN10
FOXD1
SH3BP4
CARHSP1
DPH6
GABRQ
MAST4
OLFML3
WDHD1
SOCS4
SRCIN1
SRSF7
NEBL
RTN4
ADA2
STK31
HBG2
TJP2
ZNF781
IFT80
DDX3X
TBC1D16
MOG
DENR
TIAM2
ITGB3
ISOC2
TGIF1
CCDC130
PEAK1
HMG20A
PUF60
ZNF304
KDM2B
SENP2
MMACHC
CCDC163
PYCR2
SYN3
SLC39A8
RBFOX2
DST
SASH1
AK4
CACNA2D1
TNC
SINHCAF
EXT1
C8orf58
AHCYL2
USP7
DUSP12
GCNT2
ADAR
WDR49
SLC46A1
PTAR1
PLEKHG1
UNK
AEBP2
H3-3B
PNRC1
GTF2I
KCNJ1
AKIRIN2
ALDH7A1
TOMM40
LYPD6B
C10orf95
OAZ2
PXMP4
NDST1
SHF
ACVR1
EMSY
DOK7
UGT1A6
C20orf96
ABCB5
GABRB3
SNX19
UFD1
CDC45
KDM3A
ZCCHC3
TNFSF8
TMEM47
NDUFV1
LRIG1
RTBDN
MAST1
CAPN3
PACSIN2
ZNF536
PDIA4
ANK2
FAM24B
CHD6
ZNF296
GEMIN7
CCN2
PSIP1
ABL2
PSME3IP1
VANGL2
RASAL2
NECTIN1
TRIB2
LIN28A
SIX2
FZD5
KLF3
PITPNM2
TPST2
TCF7L2
MYCL
SLC20A2
ZNF195
REV3L
ESR2
HES1
TIAM1
TESK2
INSM1
AASDH
SMAD3
PDE1B
AUH
UBAP2
ZNF875
PRODH
LOC102724788
ZBTB45
DIDO1
SLC33A1
HHIP
MARCKS
CCL26
MVB12A
KRT8
GLDC
ZNF600
F11R
NDUFAB1
TSPAN14
PRKAG2
SLC25A36
ZNF649
FOXO6
NPSR1
PPP2R3A
MSANTD4
DPPA4
SLFN12
ATP6V1G1
ZNF664-RFLNA
ZNF664
CCDC92
BCL9
RPL8
TRPC4AP
SLC3A2
ZNF565
NTN5
SMIM14
DISP3
SLC23A2
TFE3
MAGEB2
CDH10
TMEM43
CHCHD4
PGBD5
NEUROG3
SUCO
TRPM1
SAPCD2
PXDC1
LIMK2
CNOT11
MUS81
CFL1
CHMP7
VASH2
KLF7
PRRC2B
H3C15
H3C14
H2AC19
H2AC18
LRAT
NUP160
SOAT1
WDR36
RNASE9
CDYL
TLE1
TFAP2A
TET3
ESX1
PYGB
ZSCAN9
BIN2
FAM20A
SLC16A13
ABCC10
FAM153B
TNRC6A
OR2T1
EPB41L1
KLF6
TMUB2
MTHFD1
B3GALT5
STOX2
ZNF428
LRRC47
BFAR
ZBTB18
VPS37B
BORCS6
CRISPLD1
CFLAR
CFAP20
PDGFA
MAP6
KLF5
ACSL1
SORT1
ID1
TNFRSF6B
SELPLG
PIK3R3
BCAT1
INO80D
OGA
CSF2RB
BRINP2
NXPH2
YIPF4
PREP
G3BP1
CNGA1
PAK1
KRTAP3-1
ETV6
STMN1
PLPP3
CPT1A
CTNNA1
LRRTM2
KCNIP4
ZNF517
GAST
CCDC85A
S100A16
GSAP
DPP3
TRMT2A
RANBP1
RMND1
ARMT1
ADAMTS16
ARHGAP42
ZNF202
SACM1L
LRGUK
ACOXL
BBC3
DACT3
RFLNA
ABCC2
PNCK
APOBEC3G
UBQLN4
LAMTOR2
DEFB114
DEFB113
ZNF814
F11
HSPH1
POLB
ZMAT2
CXADR
CELSR3
TKT
SYNCRIP
NIPAL1
CTNND2
PIF1
IFI16
DHX8
GLI2
SAXO1
TACC2
MEX3D
EPHB3
BAHCC1
PTPRN
ACSL6
EXOSC9
CD2BP2
DHRS3
ZFP3
HES5
PANK4
TP53
HMGN1
ANAPC15
CSRNP2
YAF2
MRPL18
TOX3
NUAK1
SLAMF1
SDCBP
NWD1
KNTC1
TRDMT1
ADGRL2
SHC3
ERMN
MBOAT2
HOXB1
SDHC
SH3GL3
SALL4
ESRRA
CATSPERZ
CAAP1
DNAJC7
PSME2
GADD45A
TRIM13
CP
ARSL
MYEOV
ERBB2
TIAL1
SLCO5A1
PLCH1
LYPLAL1
MEIS2
ISL2
C22orf39
VEZT
UPF1
FGD6
SPTLC2
MAMDC2
CD200
ASIP
OR6C3
LLGL1
SLC6A8
AJAP1
RABGAP1L
EMC9
TUT1
NKIRAS2
CCDC200
SLC25A11
RNF167
SNAP23
EPHA4
STRA6
GALNT8
DCLK1
LONRF3
TLX3
RAB30
YLPM1
PPME1
C2CD3
WASF1
CDC40
TMEM107
DDX39A
LEKR1
AIRE
ARID5A
TBC1D23
DPYSL3
TLE3
AFF1
SDCCAG8
CEP170
ABLIM1
PPP1R18
NRM
KLHL24
ST6GAL1
CNMD
PGAP3
CAPZB
IL7R
TSPAN5
ZFYVE1
SPATC1L
TLL2
CCL2
MSL2
RNF43
RAB23
SRP68
NEDD9
ZNF140
SLC10A2
TPCN2
RNF213
TCHP
FOXN3
OCSTAMP
ERGIC2
C1QTNF7
PTPN12
SLC25A16
SYBU
NACAD
CHD7
GUCA1A
HELLS
KRBA2
CNR2
ZBTB40
GCSAM
HSBP1L1
EXOC7
DTX2
CTTNBP2NL
ITGB1
NEPRO
JUP
ZFAND3
CCDC33
DUSP29
SFPQ
GABBR1
MIDEAS
PRAC2
PRAC1
TCF4
SP5
SNX16
COPZ1
CEP63
ANAPC13
RARB
SPATA22
RAD54B
KIAA1522
LNX1
ARMC12
STK32C
LRRC27
ZNF552
GOLGB1
ZNF627
H4C15
H4C14
AP2B1
SET
PROM1
SMAGP
RAPGEF5
TAGLN3
CHCHD3
ZSWIM4
NCOA7
MATR3
PHLDB2
RRAGA
MEF2C
CCDC88C
ETFB
RAB17
ZDHHC5
LGR6
RAX
ANKRD40
IL17RD
ATG9B
ASH2L
IFIT3
TMEFF1
RPL27
LYPD1
CACNA1S
YEATS2
SPATA12
EGR3
SCOC
CLCF1
GJA10
TCAF1
LHFPL4
THEM4
ANP32A
EP300
NATD1
ERVH48-1
PCDHB8
CCDC167
PES1
ROR1
PRND
NARF
ARSG
PCYT1B
KIAA0895L
HEXIM2
CDC25A
TMX2
MED19
PRKCA
NKX1-2
PEA15
PWWP2A
AKIRIN1
ADRM1
VSIG10
NCBP2AS2
NCBP2
ACCS
GDF5
ZFAND6
RNF19A
DNAJB1
GABPB2
GLIPR2
KRT6B
CUEDC1
RESF1
RBBP9
MTUS1
SEC14L5
ZIC4
ATAT1
TRPM3
PCDHB16
E2F7
MDK
PLEKHG5
GALNT3
ZBTB8OS
RBBP4
PDE4D
RGPD1
ETV5
CMTM4
C1R
FGF4
FAM126A
SPAG9
ENO1
HNRNPDL
ENOPH1
OAT
IGBP1
FSBP
FZD7
ARHGAP19
CNP
NSA2
GFM2
HBP1
ZFP64
ZNF318
SUFU
ACTR1A
CCDC88A
GBX2
TSNAXIP1
RANBP10
SKIDA1
JAG1
MBNL3
HLTF
ZBTB2
PRPS1
EPB41L4B
EPB41L2
ABCB8
PAN2
IL23A
UHRF1BP1L
WDR44
NR6A1
TIA1
LOC150051
ZNF37A
FAT1
MOSPD3
CDC42EP4
HSPA13
ZFP36L1
ZBTB6
NFYC
MANSC1
THRB
NRXN1
ARSD
TCN2
HEY2
FGF19
PYGM
IPO11
ANKHD1-EIF4EBP3
ANKHD1
CNKSR3
RASSF8
TRIM22
PHC2
TRIM5
CYB5R2
DLX6
STX16
NKIRAS1
SULT6B1
CEBPZOS
ARF4
SALL2
AKAP9
PRSS23
TBL1XR1
SPRY2
GATA3
PCDHB5
CNN3
ZCCHC12
TUBA1C
SHROOM3
KLHL5
SCHIP1
EXOC5
AP5M1
QSER1
GSPT2
SENP8
MYO9A