ChIP-Atlas: Target genes

Potential target genes for SOX2

Query protein: SOX2
Distance from TSS: ± 1 kb  ± 5 kb  ± 10 kb
Sort key: SRX5771666 | N2102Ep
 
Color legends
  1000 750 500 250 1 0  (Values = Binding scores of MACS2 and STRING)

Download: TSV (text)
Links: Movie and Document for ChIP-Atlas Target Genes
SOX2's Target genes

◢ SOX2: Average

◢ SRX130061: BJ

◢ SRX10407083: Esophageal squamous carcinoma cell line

◢ SRX10407084: Esophageal squamous carcinoma cell line

◢ SRX5286338: ES cells

◢ SRX5286339: ES cells

◢ SRX5286342: ES cells

◢ SRX5286343: ES cells

◢ SRX11904439: H29

◢ SRX11904440: H29

◢ SRX6852812: HCC2814

◢ SRX277137: HCC95

◢ SRX6852810: HCC95

◢ SRX3205373: Head and neck squamous cell carcinoma 

◢ SRX702105: hESC derived mesendodermal cells

◢ SRX702106: hESC derived mesendodermal cells

◢ SRX702108: hESC derived mesendodermal cells

◢ SRX1047416: hESC derived neural cells

◢ SRX11919277: hESC derived neuromesodermal cells

◢ SRX011616: hESC H1

◢ SRX1047413: hESC H9

◢ SRX277140: hESC H9

◢ SRX6101128: hESC H9

◢ SRX6101129: hESC H9

◢ SRX266860: hESC HUES64

◢ SRX266861: hESC HUES64

◢ SRX702107: hESC HUES64

◢ SRX702109: hESC HUES64

◢ SRX20532164: hESC HUES8

◢ SRX20532165: hESC HUES8

◢ SRX5286340: hESC WIBR2

◢ SRX5286341: hESC WIBR2

◢ SRX5286344: hESC WIBR2

◢ SRX10101684: hESC WIBR3

◢ SRX10101685: hESC WIBR3

◢ SRX8026053: hESC WIBR3

◢ SRX8026055: hESC WIBR3

◢ SRX968908: iPSC derived neural cells

◢ SRX968909: iPSC derived neural cells

◢ SRX968910: iPSC derived neural cells

◢ SRX968911: iPSC derived neural cells

◢ SRX968912: iPSC derived neural cells

◢ SRX1813586: iPS cells

◢ SRX1813587: iPS cells

◢ SRX20140858: iPS cells

◢ SRX20140859: iPS cells

◢ SRX512370: iPS cells

◢ SRX6852811: KNS-62

◢ SRX10035162: KYSE-140

◢ SRX10407085: KYSE-70

◢ SRX277131: KYSE-70

◢ SRX6852808: LK-2

◢ SRX6852813: LK-2

◢ SRX6852814: LK-2

◢ SRX026880: LN-229

◢ SRX359955: LoVo

◢ ERX2260038: Lung cancer

◢ ERX2260040: Lung cancer

◢ ERX2260044: Lung cancer

◢ ERX2260046: Lung cancer

◢ SRX2731713: Lung cancer cell line

◢ SRX6750797: MDA-MB-231

◢ SRX6750798: MDA-MB-231

◢ SRX1813580: MRC-5

◢ SRX1813581: MRC-5

◢ SRX1813582: MRC-5

◢ SRX1813583: MRC-5

◢ SRX1813584: MRC-5

◢ SRX1813585: MRC-5

◢ SRX2732210: MRC-5

◢ SRX2732211: MRC-5

◢ SRX5771664: N2102Ep

◣ SRX5771666: N2102Ep

◢ SRX5771668: N2102Ep

◢ SRX11904443: NCI-H1836

◢ SRX11904444: NCI-H1836

◢ SRX6852809: NCI-H520

◢ SRX11904441: NCI-H82

◢ SRX11904442: NCI-H82

◢ SRX10445285: Neural crest cells

◢ SRX10445293: Neural crest cells

◢ SRX10445303: Neural crest cells

◢ SRX10445312: Neural crest cells

◢ SRX20140860: Neural progenitor cells

◢ SRX20140861: Neural progenitor cells

◢ SRX20140862: Neural progenitor cells

◢ SRX20140890: Neural progenitor cells

◢ SRX20140891: Neural progenitor cells

◢ SRX20140892: Neural progenitor cells

◢ SRX5716451: Neural progenitor cells

◢ SRX5716452: Neural progenitor cells

◢ SRX5716453: Neural progenitor cells

◢ SRX330107: ReN-VM

◢ SRX330108: ReN-VM

◢ SRX277134: T.T

◢ SRX3367070: TE-5

◢ SOX2: STRING

SMARCA2
ZNF483
LRRN1
BTG2
MTHFD1L
TMPRSS11E
ZSCAN2
CD99L2
SOX6
NRG1
SPATA45
SFRP2
ID3
REST
CACHD1
ECE1
LMCD1
SNRPN
SNURF
CRYGB
MRPL20
TCF7L1
IFT80
EDDM3B
OR5AR1
DCAF4L1
SHCBP1L
FGF1
PHC1
SLA2
CDX2
RMND5B
DND1
TRAPPC8
DPPA5
DNMT3B
METTL11B
LIN28B
PSIP1
ZNF398
APOBEC3F
ZSWIM3
ACOT8
NTRK2
PYGB
ZNF343
WFDC8
CELF4
ARHGEF38
ZNF608
SLTM
SAMHD1
PUF60
TIMP4
GIMAP5
LHFPL4
TRIM2
ANKRD1
MED12
TMEM43
CHCHD4
FBP1
FBXW11
PRICKLE1
FLAD1
FGD4
HESX1
SEC14L5
SLC35A5
ATG3
LONRF3
VENTX
LEFTY2
RCN1
DOK7
BCOR
ETV1
GDF3
NES
GAD2
IL34
CSF2RB
MTRNR2L8
YIPF4
TET3
RPH3A
MFSD4B
FZR1
GDF11
FGFR2
DIDO1
PEAK1
HMG20A
FAM222B
CD24
AK4
HBG2
PARP1
JPT1
TDGF1
HOXD13
HOXD12
AMN1
SCAF4
EXT1
CAPN3
RASGRF2
NCDN
KIAA0319L
DUSP6
FZD2
NACAD
TRIM16L
PTAR1
SHISA5
SMPDL3B
PRODH
LOC102724788
PSMG3
NPSR1
UHRF1BP1L
SLC46A1
REV3L
ABCB5
ACOXL
KLF17
ADAMTS16
FIGNL2
TRPM1
RAX
PSMD9
HPD
L1TD1
SNX19
FAM20A
SPIC
VCAN
SACS
NDUFV1
ZNF565
ANP32A
JAML
ZFHX3
PAK1
ISOC2
PREX2
INO80D
PLEKHA5
C10orf95
TMC5
FRAT2
CAAP1
GLDC
IGBP1
PF4
PPBP
RESF1
UTF1
PPP1R16B
RAB40AL
MAD2L2
DRAXIN
RAD18
PNRC1
KRT6B
NFE2L3
APOBEC3G
LYPD6B
BEND3
C22orf39
PCDHGC5
PCDHGC4
WDR44
CLDN9
POU5F1
GOLGA6D
SYN3
SOX14
SYT2
TRIML2
DHX32
SLC23A2
PITPNM2
PWWP3A
AGO1
TCHP
NATD1
GOLGA6C
KCNJ1
CDC14B
WDHD1
SOCS4
H3C15
H3C14
H2AC19
H2AC18
AASS
PIPOX
TRIM24
GABRB3
GABBR1
TRIT1
NEPRO
TALDO1
ITGB5
ZNF781
GXYLT2
TBC1D16
PDCL
SP7
GYG1
NAV2
ZNF875
NECTIN1
GPRC5B
MYSM1
CNGA1
NIPAL1
GSN
LEKR1
METTL7A
FZD8
NDUFAB1
GABRQ
ZNF296
GEMIN7
NRG2
GJA1
VAPB
KRTAP3-1
ZNF600
PPP2R3A
RMND1
ARMT1
CDYL
ITGB3
CFAP410
ZNF436
MAP6
CER1
MAGEB2
GTF2I
FAM180A
RGSL1
ASH2L
TRPC4AP
SLC38A9
SENP2
ZFP3
ACCS
PCBP1
CHFR
SRCIN1
PPP1R18
NRM
MDN1
MTM1
RNASE9
ESRP1
PALM2AKAP2
REXO4
ADAMTS13
MRS2
SALL4
ELOVL6
ANKRD40
ZNF438
ALDH1A2
CEP135
GOLGA6A
BIRC6
OLFML3
MBOAT2
ARSL
PRRC2B
RHBDD2
SMIM14
SOX2
CNR2
PCDHB8
PCDHB16
RASA1
KRBA2
MSX2
ARHGAP36
DDX43
LRAT
NEB
PDGFA
MAD1L1
SELPLG
KIAA1522
MUC1
USP44
RNF186
NADK
MEIS2
SMAGP
SAMD5
YAF2
B3GALT5
TIAM1
RIF1
BCAT1
DNMBP
ESX1
CMAS
SOCS3
KCNIP4
DNAJB1
HELLS
IQCF2
TNRC6A
FGD3
DPPA4
MYF5
PRDM14
TRIP4
PCLAF
GSPT2
FGF6
AIRE
PGPEP1
AGL
ANK2
CCL2
CCDC33
CYP2S1
NDST1
GPR179
CCDC169-SOHLH2
CCDC169
ZNF200
LYPD1
CCL26
DCLK1
OBI1
CSGALNACT1
LINGO1
DENR
HHIP
PTPRN
DNAJC7
NKIRAS2
DDX39A
CDC42EP4
USP7
NFKB2
SOAT1
ABL2
FGF4
FAM200B
TBC1D23
STX16
COPZ1
SESTD1
UGT1A6
MBNL3
PLAGL1
FHL1
PCDHB13
UNC13B
TNFSF8
SYNPO2
RAD54L2
BEST3
TPCN2
UPF1
OAT
TMEM167B
MOG
ETV4
GPC4
SLC25A16
FBXO40
TRIB2
KRT8
ERVH48-1
ZNF552
HDAC9
PRR14L
GPR149
CDH26
KAT8
KRTAP5-9
VOPP1
MTF2
ZNF335
JARID2
ERAS
PCDH1
SLN
UBAP2
HSBP1L1
MMACHC
CCDC163
IFIT3
GLIPR2
LBP
AP2B1
IL22RA2
SLAMF1
PCGF6
AEBP2
ZNF664-RFLNA
ZNF664
CCDC92
OR6C3
PXDC1
OCSTAMP
TMEM47
DUSP12
PCDHGB2
PCDHGA5
MCCC1
CCNT1
RIMBP2
GCSAM
PCDHB5
CCDC130
BFAR
ZDHHC1
CNPY1
PACSIN2
ZNF814
SVOPL
PBDC1
MIDEAS
DRD1
ZNF318
LRRTM4
MACROH2A1
GIGYF1
AQP2
ACSBG2
WDR49
CCDC144A
SFT2D3
GOLGA6B
ABCC2
SGMS2
POSTN
LIN28A
MVB12A
KCNN2
RIPOR3
ZNF532
FZD5
PDE1B
SERINC3
ZNF391
GRM4
LIPK
ALDH2
TRIM54
SLFN12
WBP1L
DHRS3
SPRY2
TMEM266
SPHK1
KLHL4
LRRC47
LRGUK
NKX1-2
SPRY4
PGAP6
SURF6
DACH2
ASIP
KCNMB2
DCXR
SMAD3
PRMT2
CSHL1
KDM2B
SLC35F6
F11
LHFPL5
CLPS
SERPINB6
TSGA10IP
PRUNE2
EPHB3
DEFB107B
DEFB107A
AADACL3
FRS2
LEFTY1
ATP6V1G1
CFLAR
FAM189A2
OR6J1
NLGN1
SOX15
FAM153B
MRPL18
RNF213
PNLDC1
LANCL3
TRIM64B
KLF3
ZYG11A
CAVIN3
RPL8
ZNF517
RNF43
LPCAT4
MECOM
SCGB3A2
TMEM220
HES3
ICMT
NFIX
SLC39A8
MOV10
KMT2B
ZNF202
TP53
ZIC5
RPS10-NUDT3
RPS10
HES5
PANK4
VSIG10
EPB41L1
SDHC
PSEN2
CHRNA9
MYOM1
NCALD
SLC9A4
CYP1B1
RNASE10
PMEPA1
NAXD
OVCH1
TGM7
GAST
MINAR1
GPR160
ST18
SALL3
CACNA2D1
ARID5A
CDC25A
MS4A12
GADD45G
DTX2
SMCHD1
SLC7A5
CDC42EP3
SRSF4
GRAMD2B
RBFOX2
ZCCHC3
GCLC
LRRC59
SOX5
LRRC4C
MT1E
SLC20A2
IHH
ETS1
TFPI
IER5L
ZNF649
SLC22A23
SLC35E4
ABCF3
CYRIB
DPH6
NEUROG3
HLA-F
FGF2
PIN4
SLC10A2
PTPN12
CSDE1
SULT6B1
CEBPZOS
LFNG
TMEM241
LRRTM3
KIF19
PLEKHA7
DPYSL3
GATA3
LIFR
NCOA7
PAN2
IL23A
DCLRE1C
TMCC1
WNT5B
ITM2B
CDH10
SUCO
AJAP1
CCN2
SLC24A1
BARX1
ZSCAN12
LHCGR
PRR15
SP5
CCDC141
SNX16
EPB41L4B
TNP1
ERICH3
ZFYVE1
CCDC85A
TACC2
CMC2
SPAG9
KLHL5
CPA5
SPP1
KRTAP1-1
KRTAP1-3
SASH1
PLPP3
SLC2A11
VPS37B
TSPAN18
TLL2
OLIG3
ITPK1
RND1
SRRM4
ARID2
GLB1L3
MRGPRX3
ZSCAN10
PRSS41
ZNF536
GALNT8
SPATA22
ZNF729
LOC102723623
GOLGA6L1
CCDC167
PPP1R3B
NANOG
ADA2
RHNO1
FOXM1
CHCHD3
RUNX1T1
EEA1
VMO1
GLTPD2
ANO10
ABHD5
TRPM3
ZNF624
PDPN
ACSL1
RAPGEF5
THBS2
TTC39B
RAP1A
ATP5F1E
TMEM183A
CORO6
ADAR
ZMIZ2
PCSK1
CYP1A1
FZD10
MPZL2
TRIM34
RPSA
PLAAT3
SDSL
EPHA4
DYDC2
DYDC1
INSM1
GLI2
KRTAP12-1
PROM1
FAM126A
EIF4B
C19orf25
MMAA
GPSM3
USP48
RTN4
KLF6
ZNF90
MTHFD1
ETNK2
TRIM39
PLD5
CCDC102A
ADGRG5
RNF19A
TSPAN14
RPUSD3
H3-2
PLIN2
TUT4
GOLGA6L22
PEA15
PCDH18
ZMAT2
ROR1
S100A13
OCLN
TMEM9B
GCNT2
AUH
HOXB1
FAM83F
FOXE1
RFX4
RBM20
LRRC74A
LAPTM5
CAPN10
GJA10
HECW1
MPI
STOM
RBMX
RNF138
KLF7
SET
SELENOT
CCDC172
GNAI2
TCF7L2
TAGLN3
NEBL
OLAH
IL1RAPL1
SCGB1D1
FOXD1
HGC6.3
CLEC7A
SEC22B
NRCAM
FAM24B
BIN2
EZH1
SCD5
SKIDA1
MLLT10
ZCCHC4
RGMB
RAB1A
TNC
C1orf54
APH1A
HLCS
DDX3X
CDH4
PPP1R8
IGSF1
ZBTB2
GLRB
TAF13
DHDDS
THOC2
ODF2
CNBP
ZC3H4
SIGLEC11
PRKAA1
SYBU
JAG1
ZC3H12B
COX8C
STOX2
ARRDC2
TTLL6
CXCR1
RAP2C
SGMS1
HAUS6
PBLD
HNRNPH3
CLEC6A
KLHDC8A
PPP1R37
LRP5L
MYLK3
ZFP64
SLC16A12
KRT77
ID1
STMN1
CEP152
SYNDIG1L
KRT82
ABCC10
HK2
RFFL
UPRT
SBSN
GAPDHS
MAGEB17
FGFR4
SLCO4C1
RCC2
RPRM
YWHAQ
VSNL1
C12orf75
FAM162B
PHC2
TINAGL1
MSL2
PRKCA
HYOU1
GPC6
MRTFA
RPE65
TTLL7
IGFBPL1
SMIM11B
SMIM11A
NANP
HOXD1
PLAC8
EFCAB8
PPP5C
CCR3
DPP4
UNC5B
THEM4
MARCHF2
ITPRIP
SLCO5A1
EMD
KEL
AKIRIN1
ELAC2
COL26A1
SLC13A2
IL21
FAM81B
KDELR2
OR2S2
ALPK3
IFI16
STRA6
CCND3
SLC24A3
TAF8
SLC35G4
ATR
ANKRD66
SLC36A1
LIMCH1
ADGRA1
TBC1D1
ZNF730
TOX3
SYTL2
EGFR
PADI6
MAN2C1
ARL5C
ZNF25
C1orf167
SUB1
CHN2
CPVL
INSYN2B
NSMCE4A
PRSS8
SLC25A35
RANGRF
OR2A1
RASSF8
CLEC9A
KLRC1
JAM3
AIFM1
TMEM114
SLC3A2
SUCLA2
LOC107986453
DDX18
SORBS2
BAMBI
KDM4A
LHX8
MFF
CPN2
KCNA10
TFAP2C
C7orf33
TCAF1
KLF5
TKT
DERA
POLR1F
ACP3
TMEM14A
CNKSR3
GINS3
KMT5C
CNOT11
ZNF747
FFAR1
FOXP1
ERMN
HRG
CDCA7L
ARF6
DLX6
SH2D4B
SFRP1
NHEJ1
TBCA
GFRA4
MGRN1
ZNF469
PHF19
LBH
PGBD5
BRINP1
C16orf78
ATG9B
ABCB8
ZFP36L1
MRPS23
SEPHS1
GOT1L1
CDH6
ZNF831
RAB42
SLC2A14
MYCL
PITX2
GEMIN8
ARHGEF4
SHF
CNMD
TSPAN5
C1R
EIF4EBP2
GTDC1
RAI14
GREB1
IFITM3
IFITM1
SP9
ZNF260
FMN1
IMPA2
CDH1
HCAR2
MAEL
ILDR2
FOXO4
LOC150051
FUBP1
DNAJB4
OR1E3
ARRB2
DIRAS3
IL20
PELP1
SSTR2
RFC2
ST6GAL1
HOXA1
NODAL
RCOR3
MB21D2
TUBB
MDC1
ARMC12
ARSD
C10orf120
PPP1R21
ABCA5
SDS
CAMTA1
CMTM4
ARAP3
CPNE2
MSI2
ZNF566
ATP9B
GGTLC1
SLC16A8
UBASH3B
ANKRD28
PLD2
DGLUCY
F11R
SLC4A8
RBM47
MYH9