ChIP-Atlas: Target genes

Potential target genes for SOX2

Query protein: SOX2
Distance from TSS: ± 1 kb  ± 5 kb  ± 10 kb
Sort key: SRX10101685 | hESC WIBR3
 
Color legends
  1000 750 500 250 1 0  (Values = Binding scores of MACS2 and STRING)

Download: TSV (text)
Links: Movie and Document for ChIP-Atlas Target Genes
SOX2's Target genes

◢ SOX2: Average

◢ SRX130061: BJ

◢ SRX10407083: Esophageal squamous carcinoma cell line

◢ SRX10407084: Esophageal squamous carcinoma cell line

◢ SRX5286338: ES cells

◢ SRX5286339: ES cells

◢ SRX5286342: ES cells

◢ SRX5286343: ES cells

◢ SRX11904439: H29

◢ SRX11904440: H29

◢ SRX6852812: HCC2814

◢ SRX277137: HCC95

◢ SRX6852810: HCC95

◢ SRX3205373: Head and neck squamous cell carcinoma 

◢ SRX702105: hESC derived mesendodermal cells

◢ SRX702106: hESC derived mesendodermal cells

◢ SRX702108: hESC derived mesendodermal cells

◢ SRX1047416: hESC derived neural cells

◢ SRX11919277: hESC derived neuromesodermal cells

◢ SRX011616: hESC H1

◢ SRX1047413: hESC H9

◢ SRX277140: hESC H9

◢ SRX6101128: hESC H9

◢ SRX6101129: hESC H9

◢ SRX266860: hESC HUES64

◢ SRX266861: hESC HUES64

◢ SRX702107: hESC HUES64

◢ SRX702109: hESC HUES64

◢ SRX20532164: hESC HUES8

◢ SRX20532165: hESC HUES8

◢ SRX5286340: hESC WIBR2

◢ SRX5286341: hESC WIBR2

◢ SRX5286344: hESC WIBR2

◢ SRX10101684: hESC WIBR3

◣ SRX10101685: hESC WIBR3

◢ SRX8026053: hESC WIBR3

◢ SRX8026055: hESC WIBR3

◢ SRX968908: iPSC derived neural cells

◢ SRX968909: iPSC derived neural cells

◢ SRX968910: iPSC derived neural cells

◢ SRX968911: iPSC derived neural cells

◢ SRX968912: iPSC derived neural cells

◢ SRX1813586: iPS cells

◢ SRX1813587: iPS cells

◢ SRX20140858: iPS cells

◢ SRX20140859: iPS cells

◢ SRX512370: iPS cells

◢ SRX6852811: KNS-62

◢ SRX10035162: KYSE-140

◢ SRX10407085: KYSE-70

◢ SRX277131: KYSE-70

◢ SRX6852808: LK-2

◢ SRX6852813: LK-2

◢ SRX6852814: LK-2

◢ SRX026880: LN-229

◢ SRX359955: LoVo

◢ ERX2260038: Lung cancer

◢ ERX2260040: Lung cancer

◢ ERX2260044: Lung cancer

◢ ERX2260046: Lung cancer

◢ SRX2731713: Lung cancer cell line

◢ SRX6750797: MDA-MB-231

◢ SRX6750798: MDA-MB-231

◢ SRX1813580: MRC-5

◢ SRX1813581: MRC-5

◢ SRX1813582: MRC-5

◢ SRX1813583: MRC-5

◢ SRX1813584: MRC-5

◢ SRX1813585: MRC-5

◢ SRX2732210: MRC-5

◢ SRX2732211: MRC-5

◢ SRX5771664: N2102Ep

◢ SRX5771666: N2102Ep

◢ SRX5771668: N2102Ep

◢ SRX11904443: NCI-H1836

◢ SRX11904444: NCI-H1836

◢ SRX6852809: NCI-H520

◢ SRX11904441: NCI-H82

◢ SRX11904442: NCI-H82

◢ SRX10445285: Neural crest cells

◢ SRX10445293: Neural crest cells

◢ SRX10445303: Neural crest cells

◢ SRX10445312: Neural crest cells

◢ SRX20140860: Neural progenitor cells

◢ SRX20140861: Neural progenitor cells

◢ SRX20140862: Neural progenitor cells

◢ SRX20140890: Neural progenitor cells

◢ SRX20140891: Neural progenitor cells

◢ SRX20140892: Neural progenitor cells

◢ SRX5716451: Neural progenitor cells

◢ SRX5716452: Neural progenitor cells

◢ SRX5716453: Neural progenitor cells

◢ SRX330107: ReN-VM

◢ SRX330108: ReN-VM

◢ SRX277134: T.T

◢ SRX3367070: TE-5

◢ SOX2: STRING

CDX2
DUX4
REST
SMARCA2
SOCS3
FRG2C
SACS
SOX2
CACHD1
TCF7L1
ARHGEF38
AGO1
NES
RPH3A
MUC1
OBI1
CD99L2
FIGNL2
LRRN1
CER1
GIMAP5
TMPRSS11E
MTF2
NTRK2
EMD
TTYH1
NAV2
SP5
METTL11B
DNMBP
TNC
SOX6
RFX4
RMND5B
GOLGA6D
GAD2
PLPP2
SRRM4
FRG2
SHCBP1L
CCDC169-SOHLH2
CCDC169
SHISA5
PIPOX
NFE2L3
OR5AR1
MTM1
PF4
PPBP
LLGL1
DPPA5
ZNF436
STRA6
FGF1
IFRD1
EDDM3B
ANKRD1
UTF1
ERMN
MFSD4B
CLDN9
ZNF775
MRPL20
ITPRIP
DNMT3B
FOXD1
POU5F1
TRAPPC8
TLL2
MTRNR2L8
DUSP6
FBXW11
LIN28B
BFSP1
LIMCH1
SNRPN
FRAT2
FBP1
ETV4
DUSP12
HHIP
NRCAM
KDM2B
ZFHX3
XPNPEP2
PHC1
LMCD1
TRIB2
BCOR
HES3
ICMT
USP7
FGD3
USP17L5
USP17L30
USP17L29
USP17L28
USP17L27
USP17L26
USP17L25
USP17L24
ALDH1A2
KLHL4
KLF6
FAM126A
SLC7A5
NANOG
SRCIN1
FZD5
PNCK
SLC6A8
AKIRIN1
FAM222B
USP44
MDN1
ARSD
IER5L
CNPY1
SAMD5
BFAR
PRICKLE1
PPP1R16B
PLAGL1
DHDDS
LEFTY1
REV3L
ECE1
RNF213
SFRP2
TMEM43
CHCHD4
TRPM3
ONECUT2
TIAM1
LOC150051
COL23A1
GXYLT2
LEFTY2
ZNF398
NFE2
GNAI2
CYP2S1
DMTN
SPATA45
TRIM24
GPSM3
LIPK
PMEPA1
SENP2
SORBS2
ZNF483
PIN4
MTHFD1L
DHX32
NDUFS5
MAD2L2
DRAXIN
ACSL1
LFNG
ST18
ID3
HESX1
GADD45G
LINGO1
ZNF343
UPF1
FAM24B
SAMHD1
KLF3
HMOX1
NECTIN1
FGFR2
BBC3
ROR1
FZD7
FZD2
SALL3
OLFML3
ZNF664-RFLNA
ZNF664
CCDC92
NEUROG3
GSN
FAM180A
SLC46A1
SPATA12
CDC42EP3
MYBPH
ARMC12
SMCO1
PKNOX2
NTN1
HROB
KIF26A
NADK
RGS3
LZTS1
NDUFAB1
DDR1
ZNF469
AIFM1
SYNPO2
SOX14
BTG2
AHCYL2
DOK7
MED25
FUZ
WDR49
SMPDL3B
TTC39B
TFE3
ERBB2
PGAP3
FZD8
ESX1
SDCBP
SLTM
RHBDD2
ZNF814
DPH6
MAGEB2
DGLUCY
LRAT
RCN1
KPNA2
IL34
ESRP1
PHF3
MRS2
SCAF4
ARHGAP10
ANK2
TMEM132B
EEF1A1
BAHCC1
EPHA4
USP17L20
USP17L22
NRARP
FAM227A
CBY1
NDUFB5
MRPL47
HMGB1
ZSCAN2
PTMA
NRG1
HDAC9
MTRNR2L1
GDF11
GRK6
FLAD1
ZSWIM3
ACOT8
NOTCH1
APOBEC3F
ARID2
TALDO1
DDX17
ZNF608
TDGF1
MED12
ETV1
RIIAD1
RASGRF2
ETS1
VENTX
SCGB3A2
PSMD9
HPD
VCAN
DDX43
CELF3
GOLGA6B
WFDC8
NCDN
KIAA0319L
CYP1A1
GOLGA6A
FGD4
FZR1
PHF5A
ACO2
DAGLB
CELF4
FAM120B
MYSM1
FGF2
GPRC5B
MTRNR2L2
MSH3
DHFR
KMT2B
PARP1
SNURF
CYTH2
GOLGA6C
IQCH
AAGAB
MCCC1
SOX5
FBXL19
RIF1
SLA2
KIFBP
PER2
SGMS2
AMN1
TMCC1
FBXO40
PRDM14
PALM2AKAP2
TRIM2
FOXP1
HGS
ARL16
MACROH2A1
TRIP4
RASA1
ZFC3H1
THAP2
SNAPC3
HOXD13
HOXD12
DND1
LRRTM3
WNT5B
SLC35A5
ATG3
ZNF532
CRYGB
JPT1
PDPN
CCT2
SPRY4
GJA1
TRIML2
CEP41
APOBEC3D
APOBEC3C
CAPRIN1
SLC2A14
TNRC18
PREX2
PRR15
SPIC
ECT2
WBP1L
SYT2
PDCL
LOC100129484
POSTN
VWCE
UNC13B
CDC14B
TUBB
MDC1
CD24
BEND3
PCBP1
CHFR
VOPP1
DCAF4L1
AASS
TGIF2-RAB5IF
TGIF2
TMC5
GDF3
ZNF335
ITGB5
DLL1
TES
KCNN2
LRRTM4
PCLAF
ARIH1
L1TD1
WDFY2
TIMP4
FAM200B
GET3
ZSCAN10
SH3BP4
CARHSP1
GABRQ
MAST4
KDM2A
WDHD1
SOCS4
SRSF7
NEBL
RTN4
ADA2
STK31
HBG2
TJP2
ZNF781
IFT80
DDX3X
TBC1D16
CHN2
MOG
DENR
TIAM2
ITGB3
ISOC2
TGIF1
CCDC130
PEAK1
HMG20A
PUF60
ZNF304
MMACHC
CCDC163
PYCR2
SYN3
SLC39A8
RBFOX2
PGPEP1
DST
SASH1
PGK1
AK4
CACNA2D1
CAMTA1
SINHCAF
EXT1
C8orf58
GCNT2
ADAR
C1orf127
PTAR1
PLEKHG1
UNK
TSKS
AP2A1
AEBP2
H3-3B
PNRC1
GTF2I
KCNJ1
AKIRIN2
ALDH7A1
TOMM40
LYPD6B
C10orf95
LMNA
OAZ2
PXMP4
NDST1
SHF
ACVR1
EMSY
UGT1A6
C20orf96
ABCB5
GABRB3
SNX19
UFD1
CDC45
KDM3A
ZCCHC3
TNFSF8
TMEM47
NDUFV1
LRIG1
RTBDN
MAST1
CAPN3
PACSIN2
ZNF536
PDIA4
CHD6
ZNF296
GEMIN7
CCN2
PSIP1
ABL2
PSME3IP1
VANGL2
RASAL2
LIN28A
SIX2
PITPNM2
TPST2
TCF7L2
MYCL
SLC20A2
ZNF195
ESR2
HES1
TESK2
INSM1
AASDH
SMAD3
PDE1B
AUH
UBAP2
ZNF875
PRODH
LOC102724788
ZBTB45
OSBPL1A
DIDO1
SLC33A1
MARCKS
CCL26
MVB12A
KRT8
GLDC
ZNF600
F11R
TSPAN14
PRKAG2
SLC25A36
ZNF649
FOXO6
NPSR1
PPP2R3A
MSANTD4
DPPA4
SLFN12
ATP6V1G1
BCL9
RPL8
TRPC4AP
SLC3A2
ZNF565
NTN5
SMIM14
DISP3
SLC23A2
CDH10
DICER1
PGBD5
SUCO
TRPM1
SAPCD2
PXDC1
LIMK2
CNOT11
MUS81
CFL1
CHMP7
VASH2
KLF7
PRRC2B
H3C15
H3C14
H2AC19
H2AC18
NUP160
SOAT1
SPHK1
WDR36
RNASE9
CDYL
TLE1
TFAP2A
TET3
PYGB
ZSCAN9
BIN2
FAM20A
SLC16A13
ABCC10
FAM153B
TNRC6A
OR2T1
EPB41L1
TMUB2
MTHFD1
MMP10
B3GALT5
STOX2
ZNF428
LRRC47
ZBTB18
VPS37B
BORCS6
WDR74
CRISPLD1
CFLAR
CFAP20
PDGFA
LRTM1
DTNA
MAP6
KLF5
SORT1
ID1
TNFRSF6B
SELPLG
PIK3R3
BCAT1
INO80D
OGA
CSF2RB
BRINP2
NXPH2
YIPF4
PREP
G3BP1
CNGA1
PAK1
KRTAP3-1
ETV6
STMN1
PLPP3
CPT1A
CTNNA1
LRRTM2
KCNIP4
ZNF517
GAST
CCDC85A
S100A16
GSAP
GPC4
DPP3
TRMT2A
RANBP1
RMND1
ARMT1
ADAMTS16
ARHGAP42
ZNF202
SACM1L
PIK3C2A
LRGUK
ACOXL
DACT3
RFLNA
ABCC2
APOBEC3G
UBQLN4
LAMTOR2
DEFB114
DEFB113
F11
HSPH1
POLB
ZMAT2
CXADR
CELSR3
TKT
SYNCRIP
NIPAL1
CTNND2
PIF1
IFI16
DHX8
GLI2
SAXO1
TACC2
MEX3D
EPHB3
PTPRN
ACSL6
EXOSC9
CD2BP2
DHRS3
ZFP3
HES5
PANK4
TP53
HMGN1
ANAPC15
CSRNP2
YAF2
MRPL18
TOX3
NUAK1
SLAMF1
NWD1
KNTC1
TRDMT1
ADGRL2
PLEKHB1
OSBPL2
SHC3
MBOAT2
HOXB1
SDHC
SH3GL3
SALL4
ESRRA
CATSPERZ
CAAP1
DNAJC7
PSME2
GADD45A
TRIM13
CP
ARSL
MYEOV
PAFAH2
TIAL1
SLCO5A1
PLCH1
LYPLAL1
MEIS2
ISL2
C22orf39
VEZT
FGD6
SPTLC2
MAMDC2
ANKRD6
CD200
ASIP
OR6C3
AJAP1
RABGAP1L
EMC9
TUT1
NKIRAS2
CCDC200
SLC25A11
RNF167
SNAP23
GALNT8
DCLK1
LONRF3
TLX3
RAB30
YLPM1
PPME1
C2CD3
WASF1
CDC40
TMEM107
DDX39A
LEKR1
AIRE
ARID5A
TBC1D23
DPYSL3
TLE3
AFF1
SDCCAG8
PIMREG
CEP170
ABLIM1
PPP1R18
NRM
KLHL24
ST6GAL1
CNMD
CAPZB
IL7R
TSPAN5
ZFYVE1
SPATC1L
CCL2
MSL2
RNF43
CTBP2
RAB23
SRP68
NEDD9
ZNF140
SLC10A2
TPCN2
TCHP
FOXN3
OCSTAMP
ERGIC2
C1QTNF7
PTPN12
SLC25A16
SYBU
NACAD
CHD7
GUCA1A
HELLS
KRBA2
CNR2
ZBTB40
GCSAM
HSBP1L1
RBM20
EXOC7
DTX2
ITPK1
CTTNBP2NL
ITGB1
NEPRO
JUP
ZFAND3
CCDC33
DUSP29
SFPQ
GABBR1
MIDEAS
PRAC2
PRAC1
TCF4
SNX16
COPZ1
CEP63
ANAPC13
RARB
SPATA22
RAD54B
KIAA1522
LNX1
STK32C
LRRC27
ZNF552
GOLGB1
ZNF627
H4C15
H4C14
AP2B1
SET
PROM1
SMAGP
FAM181A
RAPGEF5
TAGLN3
CHCHD3
ZSWIM4
NCOA7
MATR3
PHLDB2
RRAGA
MEF2C
CCDC88C
ETFB
RAB17
ZDHHC5
LGR6
TP53INP1
RAX
ANKRD40
IL17RD
ATG9B
ASH2L
IFIT3
NKX2-2
TMEFF1
RPL27
LYPD1
CACNA1S
YEATS2
EGR3
SCOC
CLCF1
GJA10
ALDH2
TCAF1
LHFPL4
THEM4
ANP32A
EP300
NATD1
ERVH48-1
PCDHB8
CCDC167
LCOR
PES1
PRND
NARF
ARSG
PCYT1B
KIAA0895L
HEXIM2
CDC25A
TMX2
MED19
PRKCA
NKX1-2
PEA15
PWWP2A
ADRM1
VSIG10
NCBP2AS2
NCBP2
ACCS
GDF5
ZFAND6
RNF19A
DNAJB1
GABPB2
GLIPR2
KRT6B
CUEDC1
RESF1
RBBP9
MTUS1
SEC14L5
ZIC4
ATAT1
PCDHB16
E2F7
POLDIP3
MDK
PLEKHG5
GALNT3
ZBTB8OS
RBBP4
PDE4D
RGPD1
ETV5
CMTM4
C1R
FGF4
SPAG9
ENO1
HNRNPDL
ENOPH1
OAT
IGBP1
FSBP
ARHGAP19
CNP
NSA2
GFM2
HBP1
ZFP64
ZNF318
SUFU
ACTR1A
CCDC88A
GBX2
TSNAXIP1
RANBP10
SKIDA1
JAG1
MBNL3
HLTF
ZBTB2
PRPS1
EPB41L4B
EPB41L2
ABCB8
PAN2
IL23A
UHRF1BP1L
MEX3A
WDR44
NR6A1
TIA1
ZNF37A
FAT1
MOSPD3
CDC42EP4
HSPA13
ZFP36L1
ZBTB6
FAM107A
NFYC
MANSC1
THRB
NRXN1
TCN2
HEY2
FGF19
PYGM
TMPRSS9
IPO11
ANKHD1-EIF4EBP3
ANKHD1
CNKSR3
RASSF8
TRIM22
PHC2
TRIM5
CYB5R2
DLX6
STX16
NKIRAS1
SULT6B1
CEBPZOS
ARF4
SALL2
AKAP9
PRSS23
TBL1XR1
SPRY2
GATA3
PDE4B
PCDHB5
CNN3
ZCCHC12
TUBA1C
SHROOM3
KLHL5
SCHIP1
EXOC5
AP5M1
FZD9
QSER1
GSPT2
SENP8
MYO9A
TRIT1
RAI14