ChIP-Atlas: Target genes

Potential target genes for SOX2

Query protein: SOX2
Distance from TSS: ± 1 kb  ± 5 kb  ± 10 kb
Sort key: SRX5716451 | Neural progenitor cells
 
Color legends
  1000 750 500 250 1 0  (Values = Binding scores of MACS2 and STRING)

Download: TSV (text)
Links: Movie and Document for ChIP-Atlas Target Genes
SOX2's Target genes

◢ SOX2: Average

◢ SRX130061: BJ

◢ SRX10407083: Esophageal squamous carcinoma cell line

◢ SRX10407084: Esophageal squamous carcinoma cell line

◢ SRX5286338: ES cells

◢ SRX5286339: ES cells

◢ SRX5286342: ES cells

◢ SRX5286343: ES cells

◢ SRX11904439: H29

◢ SRX11904440: H29

◢ SRX6852812: HCC2814

◢ SRX277137: HCC95

◢ SRX6852810: HCC95

◢ SRX3205373: Head and neck squamous cell carcinoma 

◢ SRX702105: hESC derived mesendodermal cells

◢ SRX702106: hESC derived mesendodermal cells

◢ SRX702108: hESC derived mesendodermal cells

◢ SRX1047416: hESC derived neural cells

◢ SRX11919277: hESC derived neuromesodermal cells

◢ SRX011616: hESC H1

◢ SRX1047413: hESC H9

◢ SRX277140: hESC H9

◢ SRX6101128: hESC H9

◢ SRX6101129: hESC H9

◢ SRX266860: hESC HUES64

◢ SRX266861: hESC HUES64

◢ SRX702107: hESC HUES64

◢ SRX702109: hESC HUES64

◢ SRX20532164: hESC HUES8

◢ SRX20532165: hESC HUES8

◢ SRX5286340: hESC WIBR2

◢ SRX5286341: hESC WIBR2

◢ SRX5286344: hESC WIBR2

◢ SRX10101684: hESC WIBR3

◢ SRX10101685: hESC WIBR3

◢ SRX8026053: hESC WIBR3

◢ SRX8026055: hESC WIBR3

◢ SRX968908: iPSC derived neural cells

◢ SRX968909: iPSC derived neural cells

◢ SRX968910: iPSC derived neural cells

◢ SRX968911: iPSC derived neural cells

◢ SRX968912: iPSC derived neural cells

◢ SRX1813586: iPS cells

◢ SRX1813587: iPS cells

◢ SRX20140858: iPS cells

◢ SRX20140859: iPS cells

◢ SRX512370: iPS cells

◢ SRX6852811: KNS-62

◢ SRX10035162: KYSE-140

◢ SRX10407085: KYSE-70

◢ SRX277131: KYSE-70

◢ SRX6852808: LK-2

◢ SRX6852813: LK-2

◢ SRX6852814: LK-2

◢ SRX026880: LN-229

◢ SRX359955: LoVo

◢ ERX2260038: Lung cancer

◢ ERX2260040: Lung cancer

◢ ERX2260044: Lung cancer

◢ ERX2260046: Lung cancer

◢ SRX2731713: Lung cancer cell line

◢ SRX6750797: MDA-MB-231

◢ SRX6750798: MDA-MB-231

◢ SRX1813580: MRC-5

◢ SRX1813581: MRC-5

◢ SRX1813582: MRC-5

◢ SRX1813583: MRC-5

◢ SRX1813584: MRC-5

◢ SRX1813585: MRC-5

◢ SRX2732210: MRC-5

◢ SRX2732211: MRC-5

◢ SRX5771664: N2102Ep

◢ SRX5771666: N2102Ep

◢ SRX5771668: N2102Ep

◢ SRX11904443: NCI-H1836

◢ SRX11904444: NCI-H1836

◢ SRX6852809: NCI-H520

◢ SRX11904441: NCI-H82

◢ SRX11904442: NCI-H82

◢ SRX10445285: Neural crest cells

◢ SRX10445293: Neural crest cells

◢ SRX10445303: Neural crest cells

◢ SRX10445312: Neural crest cells

◢ SRX20140860: Neural progenitor cells

◢ SRX20140861: Neural progenitor cells

◢ SRX20140862: Neural progenitor cells

◢ SRX20140890: Neural progenitor cells

◢ SRX20140891: Neural progenitor cells

◢ SRX20140892: Neural progenitor cells

◣ SRX5716451: Neural progenitor cells

◢ SRX5716452: Neural progenitor cells

◢ SRX5716453: Neural progenitor cells

◢ SRX330107: ReN-VM

◢ SRX330108: ReN-VM

◢ SRX277134: T.T

◢ SRX3367070: TE-5

◢ SOX2: STRING

MTRNR2L8
GRK6
MTRNR2L2
MSH3
DHFR
GET3
FOXO6
MTRNR2L1
G3BP1
EMSY
DACT3
CYTH2
RBBP6
SLC25A11
RNF167
ZNF576
IRGQ
CCT2
PRND
KIFBP
TMPRSS9
SLC25A25
NAIF1
OSBPL1A
FAM102A
ZSCAN18
HGS
ARL16
ZBTB2
SPHK2
RPL18
UNK
H3-3B
ETV4
CLP1
DICER1
RFX4
PLTP
IREB2
CTNND2
CROCC
HMGB1
REEP6
PCSK4
SPATC1L
PELI1
NGDN
PNKP
PIH1D1
ALDH16A1
FAM227A
CBY1
WBP11
C12orf60
TESK2
TBRG4
NRCAM
NDRG4
OSBPL2
CEP41
HEXIM2
RAB36
RSPH14
BSDC1
MEA1
KLHDC3
NF2
TMX2
MED19
CHN2
H2AZ2
ASMTL
CDK16
MTF2
ETV1
PTMA
CHMP7
PSMD3
DHX9
FRMPD2
HSPH1
EPHB3
PPME1
C2CD3
PFKM
HNRNPH1
TMBIM6
CCDC169-SOHLH2
CCDC169
YLPM1
MYLPF
TBC1D10B
BTG1
TMUB2
GPC4
SDCCAG8
CEP170
SENP8
MYO9A
INTS9
HMBOX1
RTN4
HNRNPL
EGR3
TPCN1
NUP214
IQCD
IPO11
KIF5A
DCTN2
NRARP
PWWP2A
DYNLL1
SORT1
CACNA1S
RNF26
SYNGR4
ZBTB45
TRIM28
SHBG
FXR2
DIABLO
TAX1BP3
EMC6
NRL
DCAF11
TOMM40
ELL
AP3M2
JOSD1
GTPBP1
CARM1
TRDMT1
FZD9
EHD4
HNRNPC
SPEM1
TXLNG
PIK3R3
SUFU
ACTR1A
CDK12
ZNF286A
MAD2L1BP
GTPBP2
UFSP2
C4orf47
ABHD2
FAM120B
TUT1
ZCWPW1
MEPCE
LFNG
ARHGAP19
MRPL34
DDA1
FGD3
AGO1
RGPD1
RGPD2
PTH2R
ZNF672
KMT5C
C19orf67
FGFBP3
SENP2
CTTNBP2NL
SGCA
ACTR2
SPAG4
NWD1
GNAT2
AMPD2
HES5
PANK4
HACL1
BTD
SAXO1
RRAGA
PPP1R16B
ETV5
STAG3
GPC2
ZCCHC8
DSE
TSPYL4
OGA
ZDHHC5
RFX1
WDR81
DHX8
CNOT3
TCTN3
TENT5C
FAM181A
C1orf127
SHC1
CKS1B
C8orf58
MRPL45
HDGFL2
TPGS1
LSM10
ETFB
WBP1
INO80B
TUBB
MDC1
RBM23
RPL13
ZNF775
NUBP1
SELPLG
NKX2-2
TEPSIN
NDUFAF8
PODNL1
DCAF15
KPNA2
TEX50
IFRD2
USP44
ZFC3H1
THAP2
ANKRD6
PIN4
DNM2
LRRN1
PIK3C2A
TOMM40L
APOA2
SLC25A44
RFX2
VEZT
FGD6
HES6
ABCB4
TRIM2
TP53INP1
ZSCAN20
MEX3D
PIF1
CDC5L
CHD6
BANP
FBXO46
DMWD
MEIOSIN
RNF169
MICOS13
HSD11B1L
MUC1
MSANTD4
CRISPLD1
SLX1B
SLX1A
BOLA2B
BOLA2
BOLA2-SMG1P6
UVRAG
CCDC61
SPRY4
SLC33A1
KIAA0895L
POLDIP3
GNA12
NEURL4
ASPDH
JOSD2
NOTCH1
BMF
NOL4
ZSCAN2
PLEKHB1
CTBP2
ZNF140
LYSMD3
EVI5L
RPS13
COMT
KBTBD6
PC
RAB5B
BAIAP2
MPRIP
RRP9
PARP3
MYCL
PSME2
EMC9
RNF31
UCKL1
WDFY2
LRRC23
HYAL1
PAIP2B
NAA80
HYAL3
SOCS3
DDX17
DDR1
TBC1D31
PRCC
SELENOF
HS2ST1
ZFYVE1
GFRA1
SESN2
AQP5
EPRS1
WDR49
ZNF84
C12orf71
RPS23
ATP6AP1L
CLIP1
KLF1
GCDH
SMUG1
TMEM256
NLGN2
SP1
KNTC1
XPC
LSM3
TMEM91
B9D2
NEMP1
ZNF195
TCF4
CDC25A
CLPB
NUP62
IL4I1
ATF5
PPP2R1A
DOHH
KHDRBS1
DUSP1
LRRC45
CENPX
MAMSTR
HDAC9
FGD4
H3C15
H3C14
H2AC19
H2AC18
CELSR3
UBE4B
ILF3
SYMPK
FOXA3
ZNF358
ZNF548
H2BC8
H2AC8
NDUFB5
MRPL47
CCN2
TPST2
CRB2
ZBTB20
SEL1L
NDUFS8
MRPL24
ITFG2
TREX1
VPS26C
SRF
MOSPD3
TAF13
DTHD1
IFT27
RNF5
AGPAT1
ZNF48
HBP1
CPA4
LUC7L2
GGPS1
ARID4B
FMC1-LUC7L2
FMC1
CDH2
SLC35E2B
MAFG
VPS37B
COPZ1
BLOC1S4
UBE2S
KDM2A
MUS81
CFL1
ERGIC2
RPL27
PDP1
TRAPPC3
HIF1AN
KIFC1
HEXIM1
IPO4
NDUFA5
JAG1
PPP1R2
KHSRP
WDR59
RBM15
USHBP1
BABAM1
SPAST
PHF23
GABARAP
NSUN3
DHFR2
SRRM1
ELK1
IER5L
TAGLN3
RPUSD4
FAM118B
TICRR
NAA40
BRCA1
SMARCAL1
FAM219A
DNAI1
LIN52
ALDH6A1
CNIH4
RPS11
TRIOBP
TRMT1L
SWT1
ZNF823
MPV17L2
EHBP1
CD2BP2
RAB5C
FAM185A
ATF4
TOR2A
SF1
TRAF7
ELP5
CTDNEP1
MARCHF9
CDK4
SINHCAF
ALDH2
TSNAXIP1
RANBP10
EXOSC5
BCKDHA
WBP1L
E2F1
NNMT
PI4K2A
PYCR3
POLRMT
ZMAT2
NASP
MMRN1
IQCG
NFATC2IP
EPC2
MEGF8
RPL35A
MMACHC
CCDC163
PPP1R15A
PLEKHA4
C1orf189
USP1
ADAT1
SIX2
ITGB1
VIM
CCDC146
GID4
ATPAF2
SLC35B4
PPP6R3
ZSWIM4
VEPH1
RAG2
IFTAP
RND1
NCLN
NBEAL1
LPIN2
PIP4P1
DISP3
IP6K2
DNM1L
JPT2
PHF12
KBTBD3
AASDHPPT
ZNF653
FLAD1
DGLUCY
BBS7
SMARCB1
GHITM
PHB2
ERCC6L2
RLF
PCF11
RPS6KA5
NUMB
UBXN4
SPC24
CCNT1
SPRING1
RNFT2
CIC
H2AX
ZNF547
TRAPPC2B
CDC6
BFSP1
ARIH1
SDCBP
COX8A
PCDH8
DNAH1
CX3CL1
PRPF38A
ORC1
RPL29
PPP1R35
CALR3
C19orf44
PRKRIP1
ING4
TMEM109
SORBS2
CAMTA1
BAHCC1
VGF
ID4
PITX3
GBF1
NUMA1
LRTOMT
WDR19
GNB2
PKNOX1
IFRD1
LMNA
ZBTB38
ABCG1
FRAT1
DTD2
TUBA1A
KATNB1
MID1
DAD1
ZNF189
MRPL50
TSPYL1
GADD45A
SCOC
FOS
PANK2
STRADA
ESYT1
MTCH2
KRT23
TCERG1
EMC3
MEX3B
CDK5RAP3
PDXP
SIRT4
SRPRA
GOLGA5
INTS4
PTBP1
TENT5B
POLK
CERT1
C16orf91
SAC3D1
TRAK2
STRADB
ATG2A
DGAT1
ZFHX3
ADAR
NXPH2
UBQLN4
LAMTOR2
TLE3
MAP2
UBR2
PTP4A1
EEF1AKNMT
MXD1
WDR87
SIPA1L3
UBE2F
GADD45B
PRICKLE3
MAGI1
PUM3
HSPA1B
HIBADH
RACGAP1
POLR3H
BBS12
FBXL19
CFAP20
CNN3
RUFY3
C10orf120
STAP2
MPND
SRP14
PCNX3
MAP3K11
ZNF513
MAP2K7
RAB8A
PPM1E
PRKAG2
ZBTB37
ORAI3
EIF3L
ANKRD54
PKD2L1
SIDT2
ZFP36L1
PDE4B
CDK5RAP2
PAIP2
LMAN2L
VMP1
PTRH2
CAMK2D
RNF10
MTMR12
CLEC11A
ZSWIM1
ANK2
ANKHD1-EIF4EBP3
ANKHD1
RRBP1
RERE
KANSL1L
EIF3F
TCIM
FABP7
L3MBTL2
LARS1
DBN1
MECP2
EGLN2
NES
RGS3
SCHIP1
TTF2
KMT5A
FANCC
RPL21
TNMD
MRPL2
KLC4
FOSB
TULP2
NUCB1
SNRPD2
QPCTL
ABAT
PCBP2
PRPF19
E4F1
OSBP
PCM1
RPS26
PSMC4
CEMP1
RC3H2
NAA35
U2SURP
PMM1
ARFGAP2
PGM1
TAB1
PCYT1B
PGM2L1
GPBP1
KIF3C
MTRNR2L10
DDX49
COPE
TMEM151B
NFKBIE
MORF4L2
ZSWIM8
CHCHD1
TSPAN17
PSENEN
LIN37
FBXL12
ALK
NEBL
DDX39A
PGP
CALCOCO1
ZBTB5
WBP2
CENPC
EFCAB6
ERCC1
BRICD5
TTYH1
PTTG1IP
EFHC1
SLC4A2
CDK5
SNX1
CIAO2A
METTL16
RPS24
MGAM
POLR3A
UBL7
EFR3B
BUB3
PDK3
CUL3
SASH1
HNRNPUL1
TSPAN19
LRRIQ1
CCAR1
TEX2
DUSP7
STAU1
WIPI1
MAP3K13
DDX27
PGAP2
RALGAPA2
ACTN4
MED25
FUZ
TBC1D23
ADNP
NR2F1
ABCA5
SREBF2
LRRTM3
LRFN3
ZNF254
PKIG
USP30
CHD2
C2orf80
CCNG1
ZNF138
GPR180
PPP4R3B
SACS
BORCS6
ARMC12
TMEM132B
ILF2
ERICH6B
MRPL17
CBX5
DAZAP1
TRAPPC6A
BLOC1S3
HNRNPA1
GPR3
KBTBD7
UPF3B
ZNF417
MFN2
DUSP6
TCF7L2
EP300
RSF1
AAMDC
FEM1A
SDE2
EIF4A1
SZRD1
KIF27
CCNT2
RPL9
LIAS
STX12
PKD1
NARF
FAM98A
NBPF1
AP3D1
FH
ARL13B
SPARC
DDT
KDM4B
DDTL
YIF1A
TMEM151A
RMND1
ARMT1
LRP2
ITGB8
SSUH2
GPAT4
IKZF1
VTA1
NMBR
SLC39A9
ERH
SCAF11
SPATA24
FAM187A
EFTUD2
CCDC103
RNF40
CCDC189
BRD3OS
ZSCAN9
ANK3
ATG5
SSR4
IDH3G
SARNP
ORMDL2
NEK6
DNAJC12
TM9SF4
DHX16
HP1BP3
ZNF862
DOT1L
EPB41
DPP3
EXOSC9
ZNF593
C1orf232
GSG1
PPP1R21
C9orf85
ABHD17B
NPAT
ATM
CCDC181
HSD17B8
RING1
MCM10
DNTTIP2
TUBB4B
PMVK
YPEL1
PRRG2
NOSIP
NAPA
CXXC1
SNAPC3
ESRRA
CATSPERZ
EPB41L2
CHD8
ZSCAN31
XAB2
PCP2
ZIK1
SPTBN1
COL4A2-AS2
ANKRD36
WASHC3
ABI2
PIK3C2B
TADA1
PSMC5
FTSJ3
PARS2
ZBTB48
UBALD1
SAP30BP
RECQL5
FAM200B
NEDD9
TMEFF1
ACTL6A
UBE2C
DMXL1
KAZALD1
PLAGL1
DTNA
PEX11G
RBM22
NME1-NME2
NME1
MRPS14
PPP3R1
CEP128
USF3
RFC2
EPHB1
CASTOR2
STARD4
NBEAL2
CCDC12
RPUSD1
CHTF18
LMCD1
ETFDH
C4orf46
ALDH3B1
USP54
SLC26A8
MAPK14
CREM
ENSA
CDCA4
PGLS
GPN3
FAM216A
P3H1
AKTIP
EIF2S3
LMBR1L
CAPZA2
ID3
FZD2
CTNNA1
LRRTM2
FZD7
MEX3A
AKAP9
LDB1
MAGT1
COX7B
ZNF764
LYPLA1
TPRKB
ADGRB2
FBXO34
TMEM115
DNAAF3
TIAM1
NATD1
LOC150051
ZNF416
ZNF367
USPL1
HNRNPR
TNRC6B
SUCLG1
COG3
DRG2
PWP1
NDUFAF5
ESF1
UBA52
CACUL1
DNAJB5
THRAP3
SMPD2
PPP2R3B
PPIL6
PDIA4
EIF1AX
ALG8
EBNA1BP2
CFAP57
UBL5
CEP63
ANAPC13
NUDT2
INTS12
GSTCD
ANP32E
ZNF709
KIF24
SPSB2
SLX4
FICD
EIF3D
FZR1
DENR
CCDC130
UFD1
CDC45
SAPCD2
SALL2
ACYP2
PSME4
ASF1A
CRADD
ZNF738
APOM