ChIP-Atlas: Target genes

Potential target genes for SOX2

Query protein: SOX2
Distance from TSS: ± 1 kb  ± 5 kb  ± 10 kb
Sort key: SRX6750798 | MDA-MB-231
 
Color legends
  1000 750 500 250 1 0  (Values = Binding scores of MACS2 and STRING)

Download: TSV (text)
Links: Movie and Document for ChIP-Atlas Target Genes
SOX2's Target genes

◢ SOX2: Average

◢ SRX130061: BJ

◢ SRX10407083: Esophageal squamous carcinoma cell line

◢ SRX10407084: Esophageal squamous carcinoma cell line

◢ SRX5286338: ES cells

◢ SRX5286339: ES cells

◢ SRX5286342: ES cells

◢ SRX5286343: ES cells

◢ SRX11904439: H29

◢ SRX11904440: H29

◢ SRX6852812: HCC2814

◢ SRX277137: HCC95

◢ SRX6852810: HCC95

◢ SRX3205373: Head and neck squamous cell carcinoma 

◢ SRX702105: hESC derived mesendodermal cells

◢ SRX702106: hESC derived mesendodermal cells

◢ SRX702108: hESC derived mesendodermal cells

◢ SRX1047416: hESC derived neural cells

◢ SRX11919277: hESC derived neuromesodermal cells

◢ SRX011616: hESC H1

◢ SRX1047413: hESC H9

◢ SRX277140: hESC H9

◢ SRX6101128: hESC H9

◢ SRX6101129: hESC H9

◢ SRX266860: hESC HUES64

◢ SRX266861: hESC HUES64

◢ SRX702107: hESC HUES64

◢ SRX702109: hESC HUES64

◢ SRX20532164: hESC HUES8

◢ SRX20532165: hESC HUES8

◢ SRX5286340: hESC WIBR2

◢ SRX5286341: hESC WIBR2

◢ SRX5286344: hESC WIBR2

◢ SRX10101684: hESC WIBR3

◢ SRX10101685: hESC WIBR3

◢ SRX8026053: hESC WIBR3

◢ SRX8026055: hESC WIBR3

◢ SRX968908: iPSC derived neural cells

◢ SRX968909: iPSC derived neural cells

◢ SRX968910: iPSC derived neural cells

◢ SRX968911: iPSC derived neural cells

◢ SRX968912: iPSC derived neural cells

◢ SRX1813586: iPS cells

◢ SRX1813587: iPS cells

◢ SRX20140858: iPS cells

◢ SRX20140859: iPS cells

◢ SRX512370: iPS cells

◢ SRX6852811: KNS-62

◢ SRX10035162: KYSE-140

◢ SRX10407085: KYSE-70

◢ SRX277131: KYSE-70

◢ SRX6852808: LK-2

◢ SRX6852813: LK-2

◢ SRX6852814: LK-2

◢ SRX026880: LN-229

◢ SRX359955: LoVo

◢ ERX2260038: Lung cancer

◢ ERX2260040: Lung cancer

◢ ERX2260044: Lung cancer

◢ ERX2260046: Lung cancer

◢ SRX2731713: Lung cancer cell line

◢ SRX6750797: MDA-MB-231

◣ SRX6750798: MDA-MB-231

◢ SRX1813580: MRC-5

◢ SRX1813581: MRC-5

◢ SRX1813582: MRC-5

◢ SRX1813583: MRC-5

◢ SRX1813584: MRC-5

◢ SRX1813585: MRC-5

◢ SRX2732210: MRC-5

◢ SRX2732211: MRC-5

◢ SRX5771664: N2102Ep

◢ SRX5771666: N2102Ep

◢ SRX5771668: N2102Ep

◢ SRX11904443: NCI-H1836

◢ SRX11904444: NCI-H1836

◢ SRX6852809: NCI-H520

◢ SRX11904441: NCI-H82

◢ SRX11904442: NCI-H82

◢ SRX10445285: Neural crest cells

◢ SRX10445293: Neural crest cells

◢ SRX10445303: Neural crest cells

◢ SRX10445312: Neural crest cells

◢ SRX20140860: Neural progenitor cells

◢ SRX20140861: Neural progenitor cells

◢ SRX20140862: Neural progenitor cells

◢ SRX20140890: Neural progenitor cells

◢ SRX20140891: Neural progenitor cells

◢ SRX20140892: Neural progenitor cells

◢ SRX5716451: Neural progenitor cells

◢ SRX5716452: Neural progenitor cells

◢ SRX5716453: Neural progenitor cells

◢ SRX330107: ReN-VM

◢ SRX330108: ReN-VM

◢ SRX277134: T.T

◢ SRX3367070: TE-5

◢ SOX2: STRING

TNFRSF6B
FRG2C
NRARP
FRG2
RPEL1
FAM227A
CBY1
MTF2
COL23A1
SPATC1L
GALR1
MUC1
MTRNR2L1
CGRRF1
CYP4F11
FAM153B
EEF1A1
ZFAND3
NTPCR
C12orf29
CBWD5
NUDT4B
FAM240C
SOX2
PRDM4
C6orf89
PPIL1
HGC6.3
CXCL3
SPAG1
NUDCD1
TTC12
CBWD3
CBWD6
ELMOD2
WDHD1
SOCS4
ARHGAP39
ADGRB3
SAYSD1
SRPK1
NBPF1
GNPTAB
NUDT4
TMEM14B
OPRL1
LKAAEAR1
PERM1
BIRC2
H3C13
H2BC18
NPDC1
ENTPD2
MOCS1
EBAG9
PPARD
TMEM217
TBC1D22B
KRCC1
RBM19
TMEM71
PHF20L1
CT45A10
MSRB2
EMC2
POLR2J3
NOTCH2NLA
GPAM
MTMR2
FANCL
WASHC4
RTRAF
ATL1
LMBRD1
MAP4K5
STARD4
ZSCAN30
DAZ4
DAZ1
NUF2
MTCH1
ZNF322
DENR
PCMTD2
AARD
HCFC2
GLT8D2
TRPS1
TAP2
POLR2K
FBXO43
ARL14EP
MIER1
DNAI4
DAB1
PPP1R12A
TMEM260
OMA1
SH3TC2
LYSMD3
LOC389831
ZNF451
ZNF330
DDX10
FANCE
SEC31A
THAP9
ZNF311
ANKRD46
TMEM30A
GPR89A
FDXACB1
C11orf1
PSMD6
ATG14
ZSCAN31
CDC7
SECISBP2
FANK1
TNFRSF11B
COLEC10
MNAT1
KIAA1586
CHST10
TBC1D7-LOC100130357
TBC1D7
COMMD10
TCF7L2
MTHFD2L
EXOC5
AP5M1
LYRM9
SUPV3L1
GALC
RANBP17
FILIP1L
HLA-DRB1
TTC29
CMTR1
GMNC
UTP20
SLC35B3
SNRNP48
FRMD4B
GAGE2C
GAGE2B
GAGE2A
FAM200B
PIK3CA
ACYP1
CNIH1
PLEKHH2
JRKL
CCDC82
ZC2HC1C
NRAS
ACYP2
SESN3
STK38
ATG10
KDM4D
CWC15
SCFD1
DDX1
NAF1
ZNF391
SEC62
CR2
NAT10
ZNF202
DLG2
EFHC1
CRYAA2
CRYAA
UTP23
TMEM126B
SMARCA5
LRRCC1
LRRC39
C12orf75
ZNF76
SIK2
ARFGEF2
LMCD1
SPATA7
TSEN15
KRTAP4-9
SERF1B
SERF1A
PCTP
FDX1
LRRC1
PRMT2
UBR2
HMGCS1
NAPG
NEDD1
ZNF184
FRA10AC1
H3C2
GORAB
TEX9
RPP30
H2AC4
GLRA3
MFAP3
FAM114A2
MMUT
CENPQ
KRTAP3-3
SLC35C2
MRPL27
EME1
CTTNBP2NL
SLC26A8
MAPK14
SLC30A9
HSD17B12
PAK1IP1
C6orf52
FBXL5
GFPT1
TRIM44
ZBED8
CCDC167
RPUSD4
FAM118B
RNF38
COMMD8
TAF4B
DPH5
SMC6
GEN1
C1orf53
NIPSNAP3A
RNF103
CPQ
AFF1
CCDC88A
RLF
DNMT1
MED20
BYSL
RABEP1
MTERF2
OSER1
RNF19A
PTGS2
GOSR2
CD83
RABGGTB
OXR1
UBE2D1
PRKN
PACRG
OXNAD1
DPH3
CRADD
FBXO48
APLF
FRMD6
RTKN2
WDR48
SCN11A
HPS5
GTF2H1
ISOC1
NME6
SNX13
COPRS
HACL1
BTD
ZFP69B
CLEC12A
TTC32
LSM6
KIAA1109
ACTR5
AREG
MLH3
EXT1
USP53
PTP4A1
EPN1
PAQR3
GRPEL2
TCTE3
ERMARD
PXT1
KCTD20
MTREX
DHX29
DSN1
SCYL2
DEPDC4
KIF2A
VSTM5
MAML2
PRRC1
TEX10
GBE1
KRT10
GMNN
PGBD2
CAST
BAG2
SLC13A3
STX7
KIFAP3
CEP126
ANGPTL5
TP53RK
CCN3
OARD1
NFYA
ATXN7
ZSCAN16
RBM7
C11orf71
PANX1
SHPRH
UFL1
SNX2
FERMT2
MAPKAP1
SGCB
EXOSC9
CLASP2
BOD1
IL15
NDST3
SUPT3H
MOCS2
EEF1E1
SRP9
MED23
PDE4DIP
KRTAP2-3
METTL15
KIF18A
KRTAP2-2
SRSF11
MINPP1
PTGFR
GPR89B
SARS1
SCLT1
C4orf33
RPE
MAST4
GMFB
SRBD1
SNRPB2
RAB4A
CRY2
KIF5B
H3C12
H2BC17
H2AC17
REXO2
SERINC3
FAM91A1
PRKCI
BMS1
CEP120
STK4
ECI2
ACBD6
CEP135
TCAIM
C6orf226
CENPC
ZSCAN9
TMF1
STAMBP
OPN3
CHML
TOMM20L
FZD6
SNRPF
GPSM2
TDP2
ACOT13
UQCRFS1
TECPR2
CINP
NAA30
PPFIA4
OAZ2
MYO1B
MRPL42
FARSB
CLK4
PHLDA1
DNAJC19
AP3B1
EDEM2
P3H2
RDH5
BLOC1S1
STX17
KCTD8
DEPDC1
DEF6
DPY19L3
NOL10
ITGA7
ZCCHC4
C10orf88
MITF
L2HGDH
DMAC2L
SDHAF4
RNLS
LIPJ
ZPR1
APOA5
PPP1R3D
FAM217B
RPP21
AKIRIN1
CSNK2A1
POFUT1
PLAGL2
TEFM
ANTXR2
FIP1L1
BCL10
CC2D2B
CHMP2B
TMEM154
LRRC37A3
CCDC86
TTC17
NDUFAF2
ERCC8
PARVA
DUX4
KCNN2
SUCO
MAP2K5
PACRGL
SIPA1L1
MAPK8
SC5D
ELAPOR2
CSRP2
MKRN2OS
C18orf21
MAPK1IP1L
MKRN2
PIP4P2
BBS12
MTBP
MRPL13
CCNH
SUCLG2
ZNF691
RCBTB2
ZC3H13
ADGB
PAG1
AMACR
CDKL1
CFAP58
IFT57
INO80C
CEP295
GCH1
UQCRB
SLC25A46
VAMP3
PDCD6IP
VPS54
SYBU
SEL1L
VPS8
CDCA7L
MFSD2A
H2BC11
H2AC11
MOCS3
DPM1
PABPC4L
B4GALT5
DCAF8
TMTC3
CEP290
USP17L20
ZNF35
USP17L22
TBC1D5
MRPL2
KLC4
RFX3
EIF2S1
ATP6V1D
HTATIP2
IQSEC3
MTOR
AMZ2
SLC25A27
CYP39A1
OGFRL1
RNF180
PAQR8
DCUN1D5
FAM151B
CD302
KRTAP9-2
DPH6
STX18
FOCAD
NCEH1
MMS22L
CRY1
LRRC6
ZSCAN23
SS18
TFAM
MCUR1
MYLIP
NCSTN
COPA
GXYLT2
FAM174A
FIGN
EXPH5
THAP6
LNPEP
CLDN1
DCK
RAB33B
CUL1
CHD6
TESK2
TNFAIP8
USP49
RAD21
OTUD6B
NUP54
SPTLC1
MED30
RALGAPB
ST7L
CAPZA1
E2F6
BPHL
POLR1H
MRE11
ANKRD49
PRPF38B
ZNF829
ZNF568
KHDC1
EPS15L1
WDR37
UNC13B
MSANTD4
DISP1
ANKS1B
RAB28
C6orf118
DYNC2H1
KRTAP2-4
FOXO3B
FAM102B
SVBP
ERMAP
MED10
EFR3A
LCORL
RPP14
HTD2
APPL2
GOLGA5
DDHD1
MAL2
DEK
RNASE4
ANG
LZTFL1
NDUFV2
ALKBH3
TICAM2
ZFPM2
HMGCLL1
SCARB1
ANGEL1
CRBN
NFRKB
NEK11
ASTE1
PIN4
DST
LRP12
NCOA5
PHF3
TTLL7
TMEM263
MMAA
TMEM14A
INPP4B
NAP1L1
PLPP1
THOC3
TMED8
SAMD15
BTBD9
PLRG1
PRMT6
POMP
HMGB1
E2F7
VRK2
USPL1
UTS2B
CCDC50
CCNG1
SH3GLB1
PSMG2
CEP76
SMAP2
ANTXR1
TRMT5
SLC38A6
SLC25A4
SEC13
RASAL2
ZBTB18
PELI1
OAZ3
CXCL2
PNPLA8
MAEL
ILDR2
KAT7
USP6NL
ZKSCAN8
MRPL9
PTS
PELI2
RBM12
CPNE1
TMEM45A
LOC100287896
LIPT2
TMEM74
ALMS1
GABRB3
PAFAH2
ARID5B
VCPKMT
NME7
BLZF1
NTAQ1
ACADM
PTPDC1
TIGD6
HMGXB3
ALG8
SMC5
PPP1R42
MYL12B
RGL1
DNAH6
ITPR1
OXSM
NGLY1
ARG2
CHMP4C
GNG12
L3HYPDH
JKAMP
PHTF1
MYH4
SPAG16
STPG2
ATP10D
RFX6
KIF6
USP30
NREP
SVOP
DPYD
FAM3C
ERAP1
ATAD2B
COQ2
COX10
ERBB2
PGAP3
ATP5F1E
VAPB
RIC8B
ZNF124
RPL22L1
NOTCH2
TTC4
SNRK
MKLN1
DR1
CDC73
PIGF
CRIPT
TIMM10B
ARFIP2
RFESD
ZSCAN26
TCTN2
NPL
SAMD12
ZNF133
IQCH
AAGAB
DUSP12
VPS37A
CNOT7
NUDCD2
HMMR
SAV1
TMX1
H3C10
NBN
GLO1
TTC33
IFT81
BDP1
FBXO4
LONRF2
ATP6V1C1
H2BC14
H2AC14
SLC41A2
EIF1B
CFAP43
MTRNR2L8
NUP160
PPME1
C2CD3
CTNNB1
LRRC8B
PRKAR1A
ZNF491
SELENOK
CNPY3
EIF2D
USP47
MIPOL1
ASCC3
PPWD1
CENPK
ZW10
VPS37B
ALDH2
PPP1R21
H2BC4
H2AC6
ARL6
SH3RF2
SDC4
ELMO2
AGBL3
ARPC5
GPATCH2L
UBA6
RAB35
CSE1L
SMIM15
SNF8
RNF2
RGP1
MSMP
GBA2
JPT1
ROR1
RAD18
LRRC74A
PCLO
MIA3
TDG
PRICKLE2
MYEF2
CTXN2
SCAND1
MSMO1
CCDC15
CMTR2
ANKRD17
CTSC
UBXN2B
UGGT2
CEP83
SMCO4
GNL2
SNX7
ANKRD50
EPM2A
RWDD1
ING3
NDUFAF4
KLHL32
EPB41
CHMP3
RNF141
NEK4
APTX
DNAJA1
MAK
LRRFIP2
BOD1L1
EML5
NEGR1
PSMD9
HPD
KDM3A
CDK17
SEC22B
ADH5
COX18
H4C1
H3C1
H1-1
TMEM192
HSD17B7
AP3S1
IKZF5
ACADSB
SEC61G
ZNF596
UQCC2
NEK7
ALDH18A1
TIGD4
ARFIP1
ZNF134
SNAPIN
ARHGAP19
SLC35D1
RFX1
GRAMD2B
MEA1
TNPO1
KLHDC3
TEX2
SRSF6
HSF2
TXNDC16
GPR137C
PLD1
PEX3
ADAT2
JHY
EXOC6B
ZNF587
GEM
BIRC3
TP53BP2
PSMF1
MRFAP1L1
GCLM
RBM18
MRRF
OR1F12
PIGC
ZC3H12C
IL6ST
PDHX
APIP
ARFGEF3
EBPL
LAYN
FOXN3
RUNX1T1
PPP1R2
RGS2
C12orf73
NUP93
ARMC4
KIAA0319
GNG5
ZCWPW2
AZI2
SPATA1
CPEB4
RBKS
BABAM2
XKR9
SREK1
LACTB2
PIGL
NCOR1
SAMHD1
TRDMT1
SCOC
API5
CDCA4
SCGB1C1
CLOCK
SETMAR
OSCP1
BTF3
DNAH14
TDP1
DHRS4
TCTN1
TOMM34
CFL2
EFCAB11
CTSO
TEAD1
TEP1
FAM120B
SLC39A8
RBFOX2
PLPP3
GOLGB1
FOXJ3
TSPAN19
LRRIQ1
EEA1
PAM
PRPF19
RBM41
SYNRG
CPE
DIAPH1
ARRDC3
GREM2
RNF145
FAM13C
FBXO38
TUBE1
FAM229B
HDDC2
TCP11L2
C5orf51
KRTAP2-1
ZNF562
BROX
AIDA
CCDC59
TMED7-TICAM2
TMED7
CNTN5
CABCOCO1
GOLGA1
HTR7
NET1
SNX5
MGME1
XPR1
SMIM8
NOL11
ZNF112
TRIM31
RGS18
FRK
KNTC1
CTNNA3
INTS12
GSTCD
FNIP2
COL19A1
CBLB
MRPS18B
HFM1
BRD4
PCNX4
PELO
ITGA1
UBP1
ZNF717
OSBPL8
ALG9
NHLRC2
DCLRE1A
CHUK
RNF144B
HOMER1
MPHOSPH6
UBL3
SUSD5
TGFBR3
LRRC8C
TIAL1
ZNF318
SP2
ACOX3
PRKDC
MCM4
FER
MAP3K13
ZNF66
LAMA4
SELENOH
NRXN3
WDR41
PRKAB1
SUSD6