ChIP-Atlas: Target genes

Potential target genes for SOX2

Query protein: SOX2
Distance from TSS: ± 1 kb  ± 5 kb  ± 10 kb
Sort key: SRX1047416 | hESC derived neural cells
 
Color legends
  1000 750 500 250 1 0  (Values = Binding scores of MACS2 and STRING)

Download: TSV (text)
Links: Movie and Document for ChIP-Atlas Target Genes
SOX2's Target genes

◢ SOX2: Average

◢ SRX130061: BJ

◢ SRX10407083: Esophageal squamous carcinoma cell line

◢ SRX10407084: Esophageal squamous carcinoma cell line

◢ SRX5286338: ES cells

◢ SRX5286339: ES cells

◢ SRX5286342: ES cells

◢ SRX5286343: ES cells

◢ SRX11904439: H29

◢ SRX11904440: H29

◢ SRX6852812: HCC2814

◢ SRX277137: HCC95

◢ SRX6852810: HCC95

◢ SRX3205373: Head and neck squamous cell carcinoma 

◢ SRX702105: hESC derived mesendodermal cells

◢ SRX702106: hESC derived mesendodermal cells

◢ SRX702108: hESC derived mesendodermal cells

◣ SRX1047416: hESC derived neural cells

◢ SRX11919277: hESC derived neuromesodermal cells

◢ SRX011616: hESC H1

◢ SRX1047413: hESC H9

◢ SRX277140: hESC H9

◢ SRX6101128: hESC H9

◢ SRX6101129: hESC H9

◢ SRX266860: hESC HUES64

◢ SRX266861: hESC HUES64

◢ SRX702107: hESC HUES64

◢ SRX702109: hESC HUES64

◢ SRX20532164: hESC HUES8

◢ SRX20532165: hESC HUES8

◢ SRX5286340: hESC WIBR2

◢ SRX5286341: hESC WIBR2

◢ SRX5286344: hESC WIBR2

◢ SRX10101684: hESC WIBR3

◢ SRX10101685: hESC WIBR3

◢ SRX8026053: hESC WIBR3

◢ SRX8026055: hESC WIBR3

◢ SRX968908: iPSC derived neural cells

◢ SRX968909: iPSC derived neural cells

◢ SRX968910: iPSC derived neural cells

◢ SRX968911: iPSC derived neural cells

◢ SRX968912: iPSC derived neural cells

◢ SRX1813586: iPS cells

◢ SRX1813587: iPS cells

◢ SRX20140858: iPS cells

◢ SRX20140859: iPS cells

◢ SRX512370: iPS cells

◢ SRX6852811: KNS-62

◢ SRX10035162: KYSE-140

◢ SRX10407085: KYSE-70

◢ SRX277131: KYSE-70

◢ SRX6852808: LK-2

◢ SRX6852813: LK-2

◢ SRX6852814: LK-2

◢ SRX026880: LN-229

◢ SRX359955: LoVo

◢ ERX2260038: Lung cancer

◢ ERX2260040: Lung cancer

◢ ERX2260044: Lung cancer

◢ ERX2260046: Lung cancer

◢ SRX2731713: Lung cancer cell line

◢ SRX6750797: MDA-MB-231

◢ SRX6750798: MDA-MB-231

◢ SRX1813580: MRC-5

◢ SRX1813581: MRC-5

◢ SRX1813582: MRC-5

◢ SRX1813583: MRC-5

◢ SRX1813584: MRC-5

◢ SRX1813585: MRC-5

◢ SRX2732210: MRC-5

◢ SRX2732211: MRC-5

◢ SRX5771664: N2102Ep

◢ SRX5771666: N2102Ep

◢ SRX5771668: N2102Ep

◢ SRX11904443: NCI-H1836

◢ SRX11904444: NCI-H1836

◢ SRX6852809: NCI-H520

◢ SRX11904441: NCI-H82

◢ SRX11904442: NCI-H82

◢ SRX10445285: Neural crest cells

◢ SRX10445293: Neural crest cells

◢ SRX10445303: Neural crest cells

◢ SRX10445312: Neural crest cells

◢ SRX20140860: Neural progenitor cells

◢ SRX20140861: Neural progenitor cells

◢ SRX20140862: Neural progenitor cells

◢ SRX20140890: Neural progenitor cells

◢ SRX20140891: Neural progenitor cells

◢ SRX20140892: Neural progenitor cells

◢ SRX5716451: Neural progenitor cells

◢ SRX5716452: Neural progenitor cells

◢ SRX5716453: Neural progenitor cells

◢ SRX330107: ReN-VM

◢ SRX330108: ReN-VM

◢ SRX277134: T.T

◢ SRX3367070: TE-5

◢ SOX2: STRING

BFSP1
DICER1
FIGNL2
SACS
OSBPL1A
PDPN
WFDC8
PGPEP1
CAMTA1
CACNA1S
DDR1
SOCS3
FAM181A
PLEKHB1
C1orf127
PRR5L
ZFHX3
POSTN
TMPRSS9
IFRD1
METTL11B
IL7R
NES
NWD1
NFE2L1
DTNA
MTRNR2L8
CUBN
MUC1
TPST2
GFRA1
COL17A1
CTNND2
GPC4
TP53INP1
DNMT3B
TNP2
PRM3
PRM2
CHN2
LIMCH1
CCDC81
PAFAH2
PKNOX2
DTHD1
TTYH1
LRTM1
CTBP2
PTTG1IP
PCYT1B
AHNAK
ITPRIP
ABAT
SLC35D1
AGO1
ZBTB18
KIF6
FAM120B
ANO3
FRMPD2
NKX2-2
CFAP77
TOX3
FZD9
FAM107A
TAS2R60
ACVR1
LFNG
FZD3
TTYH2
PREP
PTGS1
VEPH1
LOC645177
C12orf77
MTO1
RGS12
SPIRE1
RNF175
DHX9
VIM
SLC34A2
AKAP9
HMGB1
TRIM62
MTM1
TNC
HDAC9
CP
TMPRSS7
BPNT2
USP44
LRRC2
PDE4B
NUP214
NRCAM
MTF2
ARHGEF37
ZNF775
EPB41L2
LRRN1
JPT2
PLEKHG1
MMRN1
DNMBP
NEK3
WNT5B
KIF21A
GAS2L3
MYO15A
LRRTM3
RGS3
LZTS1
PTPRD
OSBPL2
DGLUCY
OCSTAMP
PTGS2
TCF20
ETFB
ATXN7
PPP1R16B
PIPOX
NDUFS5
BIRC2
CRB2
ST18
ZNF593
C1orf232
TFDP2
LCOR
PRTFDC1
TRDMT1
MUC20
SPATC1L
MAP2
EMID1
DSCAML1
GBX2
ZNF474
CLIP1
PPM1L
THRB
PLAGL1
CYB5R2
KCTD6
CHD7
AP5S1
SAMD5
OR5AR1
GPSM3
PALM2AKAP2
NEDD9
C8orf58
PATL2
MYCL
ZFAND6
SELPLG
PRKAG2
POU3F4
LYSMD3
CX3CL1
HES3
ICMT
GXYLT2
RFX4
ALDH3B1
AGMO
SALL2
DCT
MARK2
TAB2
SIK1B
SIK1
RNF165
BTBD11
RRAGD
VSTM2L
SORBS2
BAIAP2
C9orf153
TMEM132B
PCDH18
CRISPLD1
MID1
SASH1
IGFBPL1
TMEM47
PRSS23
SOX6
STOX2
BTBD3
TIAM2
OR56B1
DHX32
LMCD1
FGD4
ZNF69
PKIG
PREX2
ARHGAP24
TAGLN3
CNN3
DLG2
TCF12
TCTEX1D4
PPP2R2B
PLK3
STK31
IPO11
ARMC12
PRKCA
TRIM8
SLC10A2
CXADR
SLAIN1
WDR49
CCDC88C
CENPA
MSH5
CLIC1
PAPLN
SPEM1
NUDT2
FRRS1
SERTAD2
PES1
TCN2
TMCC1
KLHDC8B
RARB
NDRG4
CPA4
LMNA
MEX3A
APBA2
IGF2BP1
ARID5B
ZFC3H1
THAP2
FAM227A
CBY1
PURB
FAM102A
ONECUT1
CACHD1
GJA1
CFAP92
EFCC1
CROCC
ZNF367
PEA15
CDON
SORT1
SLC4A8
GPM6B
SENP8
MYO9A
ZNF346
BCL9
SSUH2
HSD17B8
RING1
ADA2
MTUS1
FGF13
SH3BP4
ETFDH
C4orf46
HGD
ATP1B4
PACRGL
ADGRL3
DNAI2
COL4A2-AS2
CELF2
KIF26B
SPATA13
TMPRSS5
SOX2
VXN
ERBB4
APPL2
CPA5
C21orf62
SLC6A9
ANKRD6
ZNF254
PAM
GRK6
FECH
PDE4D
ERICH6B
SPTLC3
ALDH7A1
DNAH1
ZBTB20
C1orf189
TRDN
TMSB10
GPR82
WBP1L
ZHX3
RUFY3
ZNF304
DTX4
ZSCAN10
LRIG3
CXCL2
MAP1B
CXCR4
CNPY1
GSN
INAFM2
MGAM
PDHA2
SRSF7
RASAL2
MEF2C
TIAM1
LOC150051
RERE
NUFIP2
MGST1
PHC2
FOXP2
ENOX1
MOSPD3
DLL1
EPB41L1
ADGRL2
PLEKHG3
NUAK1
FSIP1
ANK3
CDIN1
PTH2R
PSME3IP1
VPS37B
EBAG9
KCNN3
UFD1
CDC45
GNAI2
MAPK8
FRS2
C2orf80
NDUFB5
MRPL47
PHF5A
ACO2
CYP1A1
BMX
ZNF362
LRP2
KDM3A
PDE1B
TSPAN14
RGMA
SAXO1
RRAGA
GADD45G
CCN2
PTPRZ1
ETV4
COL14A1
BTBD17
JAKMIP2
NADK2
CEP41
PIK3C2A
VAMP8
VAMP5
HLTF
ANKRD40CL
STRA6
LLGL1
MYH7B
GSS
FRRS1L
G3BP1
SPATA22
KLF3
TMEM150C
NFASC
SAPCD1
SERPINB12
MKRN3
BCAT1
FLVCR1
BMPR1B
LDLRAD4
GAS8
DBNDD1
NOSTRIN
SPATA2
DACT3
KRTAP19-2
KRTAP19-1
SDCCAG8
CEP170
EGR3
CD24
C20orf96
FIGN
SLC6A1
CDK5RAP2
FZD2
PRND
NR2F1
GLCCI1
YIPF3
POLR1C
TUB
ACSS1
TSPAN19
LRRIQ1
VMP1
PTRH2
NAV2
SYT2
TOMM40
RIPOR2
IKZF1
C1orf198
COA8
BAG5
PTPRA
SLC3A2
FOXP1
MMP10
CTNNA2
LRRTM1
FRZB
PRLR
ZNF609
WDR74
CLEC18A
BEND3
DOCK9
ID3
TBXAS1
HIPK2
TEX2
PTPN18
ARIH1
CLEC18B
NEK6
XYLT1
ZNF195
GEMIN8
PHLPP2
TNP1
KLHL38
KYNU
SLC29A2
RORA
N4BP3
TOP2A
ABCB4
MED25
FUZ
EDN2
FOCAD
GET3
ABCG1
TNIK
FGD3
KDM2A
PCDH8
ANP32B
CDH17
PYGB
IGFBP2
UBE2Z
DDAH1
ZSCAN2
DPP4
PER2
TESC
CD2BP2
ABCA5
ADAM20
B3GALT5
NKAIN4
CCT2
MAP2K5
RAI14
GAA
AASDH
DDX17
PIK3R3
LOC389831
RPH3A
ZSCAN18
RNF19A
PANK2
SHC3
HMOX1
TUBB
MDC1
NR4A3
OLFM4
CARHSP1
CDK6
DOK5
SERINC2
RIIAD1
CELF3
ID4
SRP9
UNK
H3-3B
RAB36
RSPH14
ARHGEF26
MBP
ELOVL6
FBXO10
PHYHIPL
SLC2A10
RNF43
ZCCHC8
SHROOM1
ABCA1
PMEPA1
GRHL2
TRIM2
IFIT3
HIP1R
CHD9
CLEC18C
PCDH11X
CAPRIN1
MYLK4
RIPOR3
NIN
CLEC3A
LRRC8B
KLHL36
FGF10
ARHGEF38
RBFOX2
VASH2
FGFRL1
PSRC1
PNCK
SLC6A8
FGFR3
DMBX1
MAPK10
XAF1
BBC3
SGCA
DHRS12
FMN2
NRXN1
TNMD
ELMO1
RGS20
BCL2L11
DMD
FLJ44635
CA14
ERMN
ITGB8
PHKB
ITFG1
ECM1
RAB30
HACL1
BTD
SCGB3A2
COL11A1
ZFYVE1
JAG1
ADPGK
JAM3
NNMT
GDPD2
ACTR3
BCAR1
OR6C3
FZD7
SLC16A13
RHOJ
CTTNBP2NL
NR2F2
RDH12
HDAC4
AKAP6
VCAN
ADGRA1
ZNF608
APC2
SNRPN
DCDC2C
MAST4
GALNT12
FRMD4A
GNAT2
AMPD2
ZNF292
CPE
ME2
PDE1A
STK32C
LRRC27
LOC389895
SHF
GLI2
LNX1
ZSCAN9
MAP6
TKTL1
NBEAL1
LIN28A
MALRD1
DHRS3
ZCWPW1
MEPCE
PLP1
PF4
PPBP
ZNF428
HSPH1
LAMP5
NXPH2
C12orf71
CARD14
EMSY
TMEM255A
SLC25A11
RNF167
ARF4
NCKAP5
DYRK1B
TNFRSF21
PTMA
CHD1
CNKSR2
PDPK1
DOP1B
TAFA5
LIX1
PRKRIP1
FREM1
GART
ASPN
FOXJ1
INPP5F
ITPRID1
SFRP2
BCOR
SLC7A5
GABBR1
LAMA4
PJA2
PI15
ONECUT2
THAP11
NUTF2
CENPT
COMT
PIAS1
ARID2
RBM20
SMAD3
HES5
PANK4
C7orf33
ZBED4
LOC102724951
LOC102724843
LOC102724219
WASF3
CELSR3
ZBTB26
ADAR
FZD8
LRIG1
ADARB1
PLCH1
TUBA1C
CSRNP3
NSD3
LETM2
PCNX1
GADD45A
TESK2
CAPS
CDH7
CDK12
NAT16
VRK2
CHI3L1
ZBTB2
CRIP2
DUSP6
TESMIN
APOLD1
DCPS
SLC33A1
TNFRSF11B
COLEC10
HGS
ARL16
ABL2
KIFBP
WDFY2
FAM174A
GSAP
TMEM169
PECR
DDX5
POMGNT1
ARHGAP18
VWA5B1
PLCE1
SIX2
PTCH1
ENPP2
PMFBP1
NDST1
CLCN5
TREX1
BANK1
HECTD2
GSE1
CSPG5
TMEM94
KIAA1958
C9orf147
OR5A2
ALOX5AP
MTCH2
FGF2
CHMP7
GABRR2
DGKB
CST2
PCDH1
TTF1
TPCN1
IQCD
PBXIP1
FRMD5
RBBP6
SMC3
ZNF358
SPARCL1
FAM81B
GNG2
MAPK1
EPHA4
SPRY4
PALLD
TENM3
SPHK1
FJX1
TSPAN5
FABP7
TUT1
RAG2
IFTAP
ISCA1
FHL1
FGFR2
ZNF709
PWWP2A
TACC1
IFI16
PYDC5
MNT
KIF2C
CDH10
TRABD2B
VEZT
FGD6
ZNF737
ADNP
BAZ2B
CDH2
HHIP
IRF2BP2
STOML3
MTHFD1L
TFEC
PPME1
C2CD3
UQCRQ
GDF9
ST7
KCNJ1
ZNF219
TMEM253
REM2
KLF6
LITAF
BBS7
BZW2
ANKMY2
GK2
REST
CLASP2
RUBCNL
CNTN6
GAST
UBQLN4
LAMTOR2
RTL8B
UBE2K
PRMT8
CDK16
BSDC1
NREP
FAM155A
ITGB3
PELI1
SPDYA
TLK1
CRYBG2
SNAPC3
UFSP2
C4orf47
MCM10
MYO9B
HAUS8
RIMBP2
YPEL3
TBX6
FRY
JHY
PTPRE
ANK2
FAM149A
ETV1
GCNT2
DNAJA2
BSX
PYGM
WNT6
ATN1
UBAP2
ENO1
RAB15
SLC7A11
RALGDS
CCDC174
TMX4
BRINP3
C3orf49
ZSCAN31
PPP1R18
NRM
ZNF385B
LANCL2
CCDC167
CALD1
SSH2
EFCAB5
FRAS1
DCDC1
FOXO6
ARL14EPL
KDM2B
SYBU
RAPGEF5
LYPD6B
CFAP20
NCALD
ANGPT1
MRTFB
DSE
TSPYL4
NAV1
TEX50
ITPK1
SNX1
CIAO2A
MRPL44
CRB1
ERGIC2
COX14
ATF7IP
SPECC1L
SHROOM2
PRICKLE2
MICAL3
TNIP3
PTK2B
CCDC171
IL12B
KCMF1
HACD4
JAM2
IFT27
THRA
TRIP10
MFSD14A
LRAT
ABLIM1
FIBCD1
MUSTN1
ITIH4
MARCKS
CCDC33
SMPDL3A
CEP295NL
CYTH2
RABGAP1L
RBM38
MSANTD4
HSPA13
MS4A4A
TREM1
MRPS2
C9orf116
VAV2
ZNF704
COX8A
ZBTB38
ESRRG
H2BU1
H2AW
PKD1L2
IRX5
REV3L
NF2
FAR2
PACSIN2
SH3PXD2A
ZNRF3
GLIPR1
A2M
BORCS6
FAM204A
RBPJ
BCL11B
PCOLCE2
SLC17A9
AGO3
ADGRD1
CALM2
ACOX3
TRMT44
TENM4
WBP11
C12orf60
CBY2
SPHK2
RPL18
MCCC1
ZNF627
NFAT5
CCAR1
ZNF548
CALCRL
FGFR1
TP53
ENOX2
WRAP53
CHD2
INSM1
PGBD5
TRAM1
ARMC4
CELF1
ZNF180
KNTC1
CCDC130
ACSL6
NCLN
CORO2B
KHDC4
RXFP4
NKX6-3
ZNF763
COL4A2
COL4A1
TEPP
TOP2B
GP5
SCOC
MYO18A
KLHDC8A
RCN1
SFPQ
NKX2-8
TOX
MOB1B
PEX11G
SPPL2B
LSM7
INAFM1
RFFL
SYNGR4
MAP3K7
FRMD6
ELAPOR1