ChIP-Atlas: Target genes

Potential target genes for SOX2

Query protein: SOX2
Distance from TSS: ± 1 kb  ± 5 kb  ± 10 kb
Sort key: SRX10407085 | KYSE-70
 
Color legends
  1000 750 500 250 1 0  (Values = Binding scores of MACS2 and STRING)

Download: TSV (text)
Links: Movie and Document for ChIP-Atlas Target Genes
SOX2's Target genes

◢ SOX2: Average

◢ SRX130061: BJ

◢ SRX10407083: Esophageal squamous carcinoma cell line

◢ SRX10407084: Esophageal squamous carcinoma cell line

◢ SRX5286338: ES cells

◢ SRX5286339: ES cells

◢ SRX5286342: ES cells

◢ SRX5286343: ES cells

◢ SRX11904439: H29

◢ SRX11904440: H29

◢ SRX6852812: HCC2814

◢ SRX277137: HCC95

◢ SRX6852810: HCC95

◢ SRX3205373: Head and neck squamous cell carcinoma 

◢ SRX702105: hESC derived mesendodermal cells

◢ SRX702106: hESC derived mesendodermal cells

◢ SRX702108: hESC derived mesendodermal cells

◢ SRX1047416: hESC derived neural cells

◢ SRX11919277: hESC derived neuromesodermal cells

◢ SRX011616: hESC H1

◢ SRX1047413: hESC H9

◢ SRX277140: hESC H9

◢ SRX6101128: hESC H9

◢ SRX6101129: hESC H9

◢ SRX266860: hESC HUES64

◢ SRX266861: hESC HUES64

◢ SRX702107: hESC HUES64

◢ SRX702109: hESC HUES64

◢ SRX20532164: hESC HUES8

◢ SRX20532165: hESC HUES8

◢ SRX5286340: hESC WIBR2

◢ SRX5286341: hESC WIBR2

◢ SRX5286344: hESC WIBR2

◢ SRX10101684: hESC WIBR3

◢ SRX10101685: hESC WIBR3

◢ SRX8026053: hESC WIBR3

◢ SRX8026055: hESC WIBR3

◢ SRX968908: iPSC derived neural cells

◢ SRX968909: iPSC derived neural cells

◢ SRX968910: iPSC derived neural cells

◢ SRX968911: iPSC derived neural cells

◢ SRX968912: iPSC derived neural cells

◢ SRX1813586: iPS cells

◢ SRX1813587: iPS cells

◢ SRX20140858: iPS cells

◢ SRX20140859: iPS cells

◢ SRX512370: iPS cells

◢ SRX6852811: KNS-62

◢ SRX10035162: KYSE-140

◣ SRX10407085: KYSE-70

◢ SRX277131: KYSE-70

◢ SRX6852808: LK-2

◢ SRX6852813: LK-2

◢ SRX6852814: LK-2

◢ SRX026880: LN-229

◢ SRX359955: LoVo

◢ ERX2260038: Lung cancer

◢ ERX2260040: Lung cancer

◢ ERX2260044: Lung cancer

◢ ERX2260046: Lung cancer

◢ SRX2731713: Lung cancer cell line

◢ SRX6750797: MDA-MB-231

◢ SRX6750798: MDA-MB-231

◢ SRX1813580: MRC-5

◢ SRX1813581: MRC-5

◢ SRX1813582: MRC-5

◢ SRX1813583: MRC-5

◢ SRX1813584: MRC-5

◢ SRX1813585: MRC-5

◢ SRX2732210: MRC-5

◢ SRX2732211: MRC-5

◢ SRX5771664: N2102Ep

◢ SRX5771666: N2102Ep

◢ SRX5771668: N2102Ep

◢ SRX11904443: NCI-H1836

◢ SRX11904444: NCI-H1836

◢ SRX6852809: NCI-H520

◢ SRX11904441: NCI-H82

◢ SRX11904442: NCI-H82

◢ SRX10445285: Neural crest cells

◢ SRX10445293: Neural crest cells

◢ SRX10445303: Neural crest cells

◢ SRX10445312: Neural crest cells

◢ SRX20140860: Neural progenitor cells

◢ SRX20140861: Neural progenitor cells

◢ SRX20140862: Neural progenitor cells

◢ SRX20140890: Neural progenitor cells

◢ SRX20140891: Neural progenitor cells

◢ SRX20140892: Neural progenitor cells

◢ SRX5716451: Neural progenitor cells

◢ SRX5716452: Neural progenitor cells

◢ SRX5716453: Neural progenitor cells

◢ SRX330107: ReN-VM

◢ SRX330108: ReN-VM

◢ SRX277134: T.T

◢ SRX3367070: TE-5

◢ SOX2: STRING

NDUFB5
MRPL47
SMCO1
DNMBP
PHF5A
ACO2
PPT1
FAM227A
CBY1
NRARP
HMGB1
PXMP4
MED25
FUZ
MATR3
CYP1A1
ZSCAN2
GRK6
MAST4
FLG
CCT2
MCCC1
DHCR24
SLC25A36
DDX17
COA6
MTF2
PYCR2
RFLNA
NOTCH1
C3orf20
LMCD1
SPRY4
PTMA
OR13C2
SIX2
CDC42EP3
ZNF148
FBXL19
SPEF1
NDUFS5
PDIA4
LYPLAL1
CYTH2
GSTO2
ZNF80
TYMSOS
TYMS
TMEM88B
ANKRD65
SLC16A13
SOX2
STK31
EXOC6
PSPH
CCT6A
PIK3R3
LFNG
SINHCAF
DKK3
PIN4
ADH7
FOXO6
ABCC1
ABLIM1
SAXO1
ISL2
RRAGA
HGS
ARL16
ECT2
UFD1
CDC45
TESK2
GOLGB1
TMUB2
ARID2
ZNF775
HMOX1
ALDH3A1
KLHL24
PER2
MFN1
IQCH
AAGAB
NEBL
MUC1
PIK3CA
TDGF1
POMGNT1
VWCE
PPP1R15A
PLEKHA4
ARIH1
MMP10
PIF1
ZNF608
ZFC3H1
THAP2
H4C15
H4C14
ZBTB6
EFHC1
KNTC1
METTL9
ST6GAL1
SH3GL3
IFRD1
TLX3
RRBP1
SNAPC3
KCNJ15
ANKHD1-EIF4EBP3
ANKHD1
VASH2
ESRRG
WBP11
C12orf60
F11R
CNKSR3
ZNF304
TGIF1
PIK3C2A
TOMM40
SPAG4
YLPM1
NDRG4
KMT2B
RARB
PIPOX
ABL2
PPME1
C2CD3
PALMD
NKIRAS1
PLA2G6
NR1D2
BLOC1S4
BCL2L11
NRCAM
SRSF7
OGA
SDHD
FAM220A
LTF
PSMB7
RNF20
ARHGAP4
PWWP2A
ADPGK
COMT
G3BP1
CPT1A
LMNA
TMEM17
GADD45A
PRR15
ETFB
PSMB6
MYOF
SENP2
SFPQ
H2AZ2
ACSL6
ELOVL5
CCL26
IFT27
RASAL2
DPP3
DDX5
ZCCHC12
ANXA11
CELSR3
ABCC5
TUBB
MDC1
OAZ2
MCM7
AP4M1
OGT
RSF1
AAMDC
ZNF273
AKR1C2
PSME3IP1
RSPRY1
TAX1BP3
EMC6
SLC25A11
RNF167
FER
PRDX1
CEP63
ANAPC13
STK32C
LRRC27
ABCG1
YES1
WDR74
ZDHHC5
KRT6A
HACL1
BTD
PAX6
CHD6
ANAPC15
LYRM1
DCUN1D3
OSCP1
GET3
TIA1
EXOSC2
KMT5A
ZNF680
WDFY2
SHF
MSANTD4
RAPGEF5
CLUAP1
ATP2C1
PLA1A
HDAC9
CSRNP2
ERGIC2
TOMM40L
APOA2
TXNRD1
LGALS8
NDST1
LIMK2
LPIN1
ASMTL
RTN4
SHC3
CDK12
ERV3-1-ZNF117
ERV3-1
SPAAR
ZSCAN9
JMJD7-PLA2G4B
JMJD7
NME7
BLZF1
PSME2
EMC9
PCNP
ST6GALNAC2
EP300
GDF5
CEP250
UNK
H3-3B
PIMREG
STAG3
GPC2
TBC1D31
CAPNS2
BBS7
SPRING1
RNFT2
TNRC18
LOC100129484
SLC33A1
OARD1
NFYA
CALR3
C19orf44
RAB30
FXR1
GTSE1
SNCA
CAPRIN1
SH3BP4
TCF4
PTCD2
MRPS27
TPM1
TMTC3
CEP290
EMSY
UBQLN4
LAMTOR2
WASF1
CDC40
NARF
RBMX
NONO
HTATIP2
HES5
PANK4
DENND4A
ZNF627
NDUFB4
TRADD
HSF4
FBXL8
DST
EIF3L
ANKRD54
CGB1
TUT1
ETV5
CEP70
SENP8
MYO9A
MICAL2
ZFX
ARHGAP27
SIN3A
TES
MIDEAS
PRXL2A
SLC35E2A
NUP160
ATAT1
PBLD
HNRNPH3
UMAD1
AMELX
ITGB5
SAPCD2
C1QTNF7
ZCCHC8
TBC1D17
AKT1S1
HEBP2
VPS8
EPHB3
COPS7A
AHSG
DMWD
COL9A2
SPHK2
RPL18
SLC25A25
NAIF1
NFX1
IER5L
TIAL1
DHX8
TUBB4B
CRYGB
VEZT
FGD6
TSNAXIP1
RANBP10
GOLGA6A
MEX3D
IGBP1
FGD3
TRMT2A
RANBP1
PSAP
KDM2A
CCAR1
CHM
WBP1L
NWD1
FGFR2
RPS6KB2
ESRRA
CATSPERZ
CDK5RAP2
CFAP77
TMEM205
CCDC159
RAB3D
REEP6
PCSK4
TTF1
MUS81
CFL1
ARHGAP19
MIDN
TMEM221
TYW1
SBDS
ETV6
SCNN1A
LTBR
SDE2
EMP1
BAZ2A
SPAST
KBTBD2
PFKM
TIGD6
HMGXB3
DUSP6
DDR1
GNA12
EIF1AX
ANO6
MTHFD1
CCDC88A
RAG2
IFTAP
PSMD3
FZD2
HEXIM2
SUFU
ACTR1A
VIT
NCOA4
TSEN2
PSPN
ALKBH7
ZBTB45
TRIM28
PELATON
CCDC116
TTC39B
SLX4IP
MKKS
TAGAP
UBE2N
CRMP1
ITGB1
TINAGL1
MAP3K5
EIF2B5
RAB36
RSPH14
CBLC
CDC37L1
PIGX
CEP19
TOP1
ERVH48-1
DNM2
NTMT1
PCBP2
AKR1A1
HNRNPUL1
GPR137
RAB11B
SH3GL1
CHAF1A
MYCL
TCIM
LRRC8A
KYAT1
RABL3
GTF2E1
ADRM1
TSPAN13
NEFH
NFE2L2
PKP2
CEP41
TNFAIP2
RAB5C
CHST12
UBL7
PPP6R1
TSKS
AP2A1
ACBD7
SWI5
GOLGA2
WDR36
KRTAP3-1
ITGB8
OSBPL1A
SDCCAG8
CEP170
TFB1M
RNF26
M6PR
KLRG1
RABGAP1L
RPL17-C18orf32
RPL17
C18orf32
YBX1
PLCH1
SYNE2
UBR2
VIPAS39
AHSA1
IFRD2
FTSJ1
ATG9A
ANKZF1
EIF3D
DGLUCY
IREB2
UQCRQ
GDF9
UBE2T
KALRN
MAMSTR
KRT5
TRIM2
EGR3
POLR3E
OTUD3
AAR2
CTSZ
KLK12
KLK11
GOLGA6B
RAP1A
SLC2A4
ALDH3B1
PLA2G1B
CSNK2A1
PLXDC2
ENDOG
LIMCH1
ZNF92
SHBG
FXR2
TPM4
ENKUR
DDX3X
ZNF195
TUBA1C
MAGT1
COX7B
C15orf40
OIT3
TLE3
HIP1R
VGF
AP3M2
RANBP3L
G3BP2
OXNAD1
DPH3
ZNF791
ZNF490
TNFSF13
SENP3
ACTL6A
NR6A1
TTF2
AP2M1
GCK
PRRC2B
CD2BP2
HNRNPC
LRRC23
ZNF720
TMEM44
IPO11
KMT5C
TCERG1
MAP2K7
PICK1
TMCO2
CELA2B
TMCC1
CTTNBP2NL
PELI1
POLR2M
RAB5B
NUDCD2
HMMR
RAPGEF1
FZR1
POLDIP3
SVIL
XXYLT1
TMEM52
CALML6
EXPH5
ZNF624
COX8A
CTH
CDK16
GPR158
NEMP1
PQBP1
TIMM17B
C8G
HSD17B12
LCN12
FBXW5
COBLL1
TMC1
DYNLT3
BORCS6
FEM1A
ZNF84
NDE1
MARF1
TRIP10
TMCC2
GPR108
RNF115
POLR3C
PPP4R1
ONECUT2
NASP
SELENOF
HS2ST1
ZNF24
SYVN1
ETV1
PLEKHG1
DACT3
ZNF8
NFATC3
LRP8
ERRFI1
MFAP5
CCDC146
DIABLO
MCTS1
TRIOBP
ZNF513
SCAF1
RRAS
KLHL5
IP6K2
PLA2G3
MEOX1
TIAF1
CEP97
BUB1B
CES1
ZNF428
KIAA0895L
HSPA13
PHACTR2
DYRK1B
KLF1
GCDH
NFIA
EDN1
MORC3
DDX41
TRIM29
KCNAB2
SOX6
C11orf58
DYNLL1
RBM22
MAP3K2
CNPY2
ZDHHC12
AKAP14
KIFBP
C8orf58
SLC20A2
ITGB4
SYNGR4
OTUD5
LDHA
SMPD3
DBNL
CCDC171
RNF217
PPP1R37
COL17A1
MRPS30
FANCC
TCOF1
U2SURP
MAD2L1BP
GTPBP2
SLC4A2
CDK5
H2BC8
H2AC8
CD109
TCF3
DNAJB5
UROD
HECTD3
SLC3A2
AHNAK
EVI5
SLC25A45
FRMD8
TSPAN31
AGAP2
PSKH1
HSPH1
TMEM107
SCOC
MTA3
KCNG3
PPM1B
SORT1
SIRT4
MYLPF
POU2F1
TBC1D10B
TPGS1
USP13
EOLA2
ARF4
INTS9
HMBOX1
DAAM1
TMEM33
ADH5
STARD7
LRRC45
CENPX
CLDN24
CLDN22
NCBP2AS2
NCBP2
STAT2
APOF
TAB2
MRPL34
DDA1
ZNF286A
FBRS
PARS2
SLC7A5
RPL15
PRICKLE3
TEAD2
DKKL1
CALCRL
SLC35B4
MPDU1
LOC100996842
CD68
BUB3
CRTAP
MTPN
LUZP6
MMACHC
CCDC163
KRT8
HNRNPAB
TBCCD1
DNAJB11
DNAL1
PHLDB2
ZBTB20
ACTR2
LPIN2
NOP53
ASPM
GRN
IFT80
ZFP36L1
SMC4
PRKAB2
ZNF57
PLTP
SPARCL1
USF3
HSPA5
GSN
AKIRIN2
ZNF250
QTRT2
CCDC191
IVNS1ABP
VPS26C
EPHB1
CNOT3
CBX1
ARL14EP
UBC
JAG1
STAP2
USO1
MPND
USP1
PCNX3
MAP3K11
ABI1
ZNF107
CYCS
PLCD3
ACBD4
TMX2
MED19
SIPA1L1
ESYT1
GPAA1
EXOSC4
MALSU1
ZNF749
EFCAB12
RFWD3
SLC48A1
ZNF37A
PTPN6
C12orf57
LSM10
CTXN3
CLPP
UFC1
C20orf96
TPCN1
PAXBP1
IQCD
ZSCAN20
CD46
CRYGS
PEMT
SPTY2D1
FAM32A
POP5
MTRNR2L8
CFAP20
FZD3
INAFM2
FBXO16
TIMM10
IPO4
FTL
ZBTB17
ATP6V1E1
NDUFS7
RIOX1
PHF14
PNKP
CP
SLC7A11
RPS5
NEURL4
TMEM59
POLR1F
H2AX
PRMT1
AURKAIP1
RNF7
EPB41L1
NATD1
GHITM
DNAJC16
CASP9
LSG1
ZNF500
CYTH3
YWHAG
STARD3NL
DDX50
SOST
ZXDC
PLEKHG2
POLG
EEF1G
PMEPA1
TNFSF9
CCDC130
FAM126A
SERINC3
PHF23
GABARAP
PIH1D1
ALDH16A1
KRT77
NDUFS2
ADAMTS4
SELENOK
PLEKHM2
ZMAT2
HBP1
NCLN
UGT2B4
SPAG8
HINT2
CYP2U1
FZD1
TSTD2
NCBP1
KIF11
ZNF443
SNRPE
CEP152
SSBP1
ATG2A
MIGA2
EEF1AKMT4-ECE2
EEF1AKMT4
ALG3
SOAT1
COX14
SZRD1
DESI2
DUS3L
NUDT19
MCM3
ETV4
LMAN2L
RNF5
AGPAT1
INTS7
DTL
MDM2
FOXP1
SEPTIN9
ARNT
ZNF687
CLDN1
MRFAP1L1
ZFYVE1
TNFAIP8
CMSS1
SART1
SBSPON
ZBED5
CAST
UTP23
TOM1L2
DRC3
HDGFL2
PRDM10
ZNF764
PPP2R1A
CEP20
SLC39A3
TNRC6B
ST3GAL4
SPEN
ODF2
OSCAR
NDUFA3
PROC
TTC16
PTRH1
GOLIM4
PUM2
NSUN4
DEDD
TLE4
ING4
FBXO46
MEIOSIN
AP3D1
GSK3B
ZMYND8
HOGA1
PC
PRCC
PI4KB
DNM1L
FBXO34
XAB2
PCP2
KDM4A
ELL
HNRNPA2B1
CBX3
PHKG2
SSR4
IDH3G
TBC1D25
RALY
RUVBL2
GYS1
PTBP1
TBC1D23
DOHH
ZCCHC3
MTMR14
ENAH
SMARCA2
REST
CDX2
NES
NAV2
TMPRSS11E
SACS
DPPA5
ARHGEF38
DUX4
METTL11B
ZNF483
ID3
FRG2C
CACHD1
AGO1
TCF7L1
NRG1
RMND5B
ANKRD1
LRRN1
CD99L2
GOLGA6D
SFRP2
SOCS3
NTRK2
MTRNR2L1
GIMAP5
FGF1
FAM222B
SPATA45
PF4
GDF11
PPBP
PHC1
SRRM4
SHCBP1L
BCOR
PRICKLE1
SNRPN
MFSD4B