ChIP-Atlas: Target genes

Potential target genes for SOX2

Query protein: SOX2
Distance from TSS: ± 1 kb  ± 5 kb  ± 10 kb
Sort key: SRX1047413 | hESC H9
 
Color legends
  1000 750 500 250 1 0  (Values = Binding scores of MACS2 and STRING)

Download: TSV (text)
Links: Movie and Document for ChIP-Atlas Target Genes
SOX2's Target genes

◢ SOX2: Average

◢ SRX130061: BJ

◢ SRX10407083: Esophageal squamous carcinoma cell line

◢ SRX10407084: Esophageal squamous carcinoma cell line

◢ SRX5286338: ES cells

◢ SRX5286339: ES cells

◢ SRX5286342: ES cells

◢ SRX5286343: ES cells

◢ SRX11904439: H29

◢ SRX11904440: H29

◢ SRX6852812: HCC2814

◢ SRX277137: HCC95

◢ SRX6852810: HCC95

◢ SRX3205373: Head and neck squamous cell carcinoma 

◢ SRX702105: hESC derived mesendodermal cells

◢ SRX702106: hESC derived mesendodermal cells

◢ SRX702108: hESC derived mesendodermal cells

◢ SRX1047416: hESC derived neural cells

◢ SRX11919277: hESC derived neuromesodermal cells

◢ SRX011616: hESC H1

◣ SRX1047413: hESC H9

◢ SRX277140: hESC H9

◢ SRX6101128: hESC H9

◢ SRX6101129: hESC H9

◢ SRX266860: hESC HUES64

◢ SRX266861: hESC HUES64

◢ SRX702107: hESC HUES64

◢ SRX702109: hESC HUES64

◢ SRX20532164: hESC HUES8

◢ SRX20532165: hESC HUES8

◢ SRX5286340: hESC WIBR2

◢ SRX5286341: hESC WIBR2

◢ SRX5286344: hESC WIBR2

◢ SRX10101684: hESC WIBR3

◢ SRX10101685: hESC WIBR3

◢ SRX8026053: hESC WIBR3

◢ SRX8026055: hESC WIBR3

◢ SRX968908: iPSC derived neural cells

◢ SRX968909: iPSC derived neural cells

◢ SRX968910: iPSC derived neural cells

◢ SRX968911: iPSC derived neural cells

◢ SRX968912: iPSC derived neural cells

◢ SRX1813586: iPS cells

◢ SRX1813587: iPS cells

◢ SRX20140858: iPS cells

◢ SRX20140859: iPS cells

◢ SRX512370: iPS cells

◢ SRX6852811: KNS-62

◢ SRX10035162: KYSE-140

◢ SRX10407085: KYSE-70

◢ SRX277131: KYSE-70

◢ SRX6852808: LK-2

◢ SRX6852813: LK-2

◢ SRX6852814: LK-2

◢ SRX026880: LN-229

◢ SRX359955: LoVo

◢ ERX2260038: Lung cancer

◢ ERX2260040: Lung cancer

◢ ERX2260044: Lung cancer

◢ ERX2260046: Lung cancer

◢ SRX2731713: Lung cancer cell line

◢ SRX6750797: MDA-MB-231

◢ SRX6750798: MDA-MB-231

◢ SRX1813580: MRC-5

◢ SRX1813581: MRC-5

◢ SRX1813582: MRC-5

◢ SRX1813583: MRC-5

◢ SRX1813584: MRC-5

◢ SRX1813585: MRC-5

◢ SRX2732210: MRC-5

◢ SRX2732211: MRC-5

◢ SRX5771664: N2102Ep

◢ SRX5771666: N2102Ep

◢ SRX5771668: N2102Ep

◢ SRX11904443: NCI-H1836

◢ SRX11904444: NCI-H1836

◢ SRX6852809: NCI-H520

◢ SRX11904441: NCI-H82

◢ SRX11904442: NCI-H82

◢ SRX10445285: Neural crest cells

◢ SRX10445293: Neural crest cells

◢ SRX10445303: Neural crest cells

◢ SRX10445312: Neural crest cells

◢ SRX20140860: Neural progenitor cells

◢ SRX20140861: Neural progenitor cells

◢ SRX20140862: Neural progenitor cells

◢ SRX20140890: Neural progenitor cells

◢ SRX20140891: Neural progenitor cells

◢ SRX20140892: Neural progenitor cells

◢ SRX5716451: Neural progenitor cells

◢ SRX5716452: Neural progenitor cells

◢ SRX5716453: Neural progenitor cells

◢ SRX330107: ReN-VM

◢ SRX330108: ReN-VM

◢ SRX277134: T.T

◢ SRX3367070: TE-5

◢ SOX2: STRING

SACS
NES
SMARCA2
PIPOX
PF4
PPBP
NAV2
SOX2
ARHGEF38
HMGB1
SPATA45
RMND5B
DNMBP
MUC1
TALDO1
CDX2
SOCS3
HDAC9
GOLGA6B
LRRN1
DPPA5
OBI1
NTRK2
AGO1
DNMT3B
GOLGA6D
TCF7L1
OR5AR1
METTL11B
GPRC5B
ANKRD1
RPH3A
REST
MTF2
GOLGA6A
FGF1
CACHD1
FAM227A
CBY1
ID3
CYP2S1
FGF2
FBXO40
POU5F1
SLTM
GOLGA6C
CLDN9
LZTS1
SLC7A5
SCGB3A2
NFE2L3
CYP1A1
GIMAP5
PLPP2
SFRP2
PHF5A
ACO2
RAB17
FGD3
FIGNL2
SOX6
SRRM4
SHCBP1L
PHC1
DUSP6
EDDM3B
DAGLB
TNC
FAM222B
SAMD5
DHX32
IFRD1
ZNF483
TMPRSS11E
FBP1
TMEM47
NANOG
RASA1
LIN28B
LRRTM3
DHDDS
PREX2
FAM180A
SOX5
HBG2
TNFRSF11A
TUBB
MDC1
ZNF398
PPP1R16B
GAD2
PARP1
BCOR
NCDN
KIAA0319L
AASS
DDR1
LMCD1
CD99L2
PSMD9
HPD
ETS1
SHISA5
SACM1L
APOBEC3D
APOBEC3C
TCAF1
ACVR1
CXADR
EXOSC9
MED25
FUZ
KDM2B
SAMHD1
GRK6
DEFB114
DEFB113
TRIB2
PRICKLE1
CER1
SLC39A8
CNPY1
TRIM24
DDX17
PTMA
HESX1
FGFR2
GTF2I
PXMP4
BTG2
ERBB2
PGAP3
ZFHX3
RFX4
FAM24B
TOMM40
TSKS
AP2A1
NADK
LIPK
SNRPN
ZNF536
SLC2A14
CACNA2D1
MDN1
NRXN1
CAPZB
C20orf96
SORBS2
MTHFD1L
TGIF2-RAB5IF
TGIF2
ZNF296
GEMIN7
ZNF304
SCAF4
SGMS2
GABRQ
GNAI2
ZSCAN2
ZNF608
TDGF1
DOK7
KCNJ1
MFSD4B
LRRTM4
PRR15
HES3
ICMT
GDF11
HMOX1
NDUFB5
MRPL47
NXPH2
RASGRF2
CARHSP1
HGS
ARL16
ADA2
USP44
SMIM3
ZSCAN10
MYSM1
IZUMO1
RTN4
ALDH7A1
RTBDN
MAST1
FOXD1
SLC46A1
MTRNR2L8
CD2BP2
ZNF428
UFD1
CDC45
RCN1
ZFC3H1
THAP2
NDUFS5
CDC14B
PGBD5
TNFSF8
S100A16
C8orf58
FZR1
FAT1
ZSWIM3
ACOT8
RIIAD1
CELF3
SALL3
TESK2
WFDC8
TSPAN5
NRARP
FAM126A
DMRT1
NECTIN1
NUAK1
LRIG1
ALDH1A2
SRCIN1
CCT2
IER5L
PDPN
GET3
CD200
TRAPPC8
KIFBP
WDR49
TLX3
TLL2
GADD45G
FGD4
GPSM3
IFI16
PYDC5
BIN2
MYCL
RAX
PYGM
CDYL
PCBP1
CD24
AEBP2
GDF3
ATP6V1G1
GALNT3
ONECUT2
ARAP3
NRG1
EXOC7
ARSD
DST
PIF1
FRAT2
MAP6
BBS7
CTNND2
FBXL19
CHFR
TRIM13
ANK2
LRRC47
HOXB1
IFITM2
CNMD
SUCO
RAB30
CNOT11
LLGL1
PDHA2
HHIP
HIP1R
TCF4
RBFOX2
TTYH1
SULT6B1
CEBPZOS
FAM153B
CSF2RB
YLPM1
DUSP29
KLF3
ZNF781
SDCCAG8
CEP170
TRIM22
TRIM5
LEFTY1
DPH6
BRINP2
C7orf57
ETV1
CHN2
USP7
ZNF195
CPVL
DCAF4L1
ABCB5
MMP10
ERMN
TRIM39
KIAA1522
QSER1
LRAT
SDCBP
RNF213
PNCK
SLC6A8
ITGB5
MAMDC2
UNK
H3-3B
FZD7
FBXW11
ACSM6
B3GALT5
RAD54B
FSBP
ROR1
DRD1
ZNF763
GCLC
TBC1D16
ETV4
SYNDIG1L
TRIML2
NOXRED1
LEFTY2
PES1
TCN2
NMNAT3
ASMT
PRDM14
CELSR3
TKT
CTSF
LINGO1
PSIP1
LEKR1
NFE2
KLRC1
ARHGAP42
ETFB
CCDC124
TARBP2
MAP3K12
CCDC88C
AKIRIN1
QPRT
PRPS1
PMEPA1
AJAP1
KCNN2
KMT2B
CYTH2
ACSL6
ACCS
PAN2
IL23A
PILRA
HECW1
BCL9
ESRP1
KCNIP4
SASH1
SMIM14
ETNK2
GJA1
PXDC1
SLC16A13
ESRRA
CATSPERZ
WDR33
CSGALNACT1
PCBP4
KNTC1
ARF4
GSN
CCDC85A
EPHB3
GABRB3
ZNF775
SLC2A12
FIBCD1
CAVIN3
SLC33A1
RNF186
SH3BP4
GPR146
CDX1
ZNF518B
RAB3GAP2
ST18
CD4
FZD8
BORCS6
ZNF506
SHKBP1
VCAN
AMN1
NEUROG3
GCSAM
PACSIN2
PDCL
RASAL2
ZNF317
AQP5
SPATA22
CPS1
WNT6
DDX43
TJP2
BBC3
PLCH1
SLC2A10
ZNF474
PLEKHB1
FAM110D
REV3L
OLFML3
RAB15
YPEL3
TBX6
MUC3A
C1orf167
ARSG
KDM2A
GUCA1A
ARHGEF19
ZNF665
PLA2G3
AASDH
EGR3
MOSPD3
SENP2
SRSF7
NFAT5
PAIP2
CHD9
DPPA4
WDR36
TBC1D1
TEX50
FZD2
ACSL1
ZNF101
ATP13A1
ARMC3
ITPRIP
SMAD3
ZNF664-RFLNA
ZNF664
CCDC92
BEND3
ST6GAL1
SUFU
ACTR1A
CNKSR3
ART3
TMCC1
DGLUCY
EMSY
PDHB
CDH10
SLC25A11
RNF167
RARG
SDE2
CCDC33
GCNT2
ZNF202
SORT1
UTF1
TMEM31
PAK4
ZNF484
EPB41L3
FAM155A
NOTCH1
RIF1
PSME3IP1
GOLGB1
PLEKHG5
RSPRY1
PTGS1
RNF19A
EBF3
BFSP1
NDST1
ARMH4
LRGUK
CACNA1S
STEAP3
NRCAM
ARID2
MOG
RPL27
PLEKHG3
SPRY4
TGIF1
PRR14L
LIMK1
L1TD1
WASF1
CDC40
PHF23
GABARAP
PTPN2
COX8A
ZCCHC3
TSGA10IP
MAD2L2
DRAXIN
AUH
TFAP2A
TRDMT1
LMOD1
CDON
SNURF
ADAR
PDIA4
MSANTD4
OAZ2
SCOC
CRYBG2
KIF26A
KLKB1
CDK17
INTS9
HMBOX1
TTF2
CAPRIN1
ZNF436
MAGEB2
MICAL3
ZNF35
TFE3
UQCRQ
GDF9
SGCA
ZNF532
ARIH1
ZBTB45
MCM10
LOC107986453
SNX19
ETV6
PBXIP1
SEMG1
GET4
TES
KDM3A
SYT12
MRPL20
PCDHB8
PCDHB16
HEY2
TRAPPC3
MAP7D1
TMC5
SPAG11B
SPAG11A
DUSP12
JAK2
PLAGL1
SAXO1
RRAGA
FRS2
MTA2
MTM1
RGS3
GSAP
GSPT2
KRT6A
ZNF3
INO80D
UBD
HTR1A
ABCC2
RAG2
IFTAP
C1orf127
ARHGEF4
OR51H1
SH3GL3
UNC13B
TRPM3
ESR1
DUSP13
RCAN3
SHF
SLC25A36
DTX2
RAB36
RSPH14
VMP1
PTRH2
HDAC2
RTKN
MMACHC
CCDC163
ACOXL
TIAL1
NRL
PCK2
SYNPO2
ZNF438
LRMDA
ALPL
FOXP1
SALL4
ILF2
N4BP2L2
RBM20
TIA1
AMOTL2
MAP3K9
DPP10
PIN4
TSPAN14
PREP
ANAPC15
FOXN3
ZIC4
ETFDH
C4orf46
MEX3D
PCYT1B
RNF24
ZNF180
PDZK1IP1
EIF4E3
SPHK2
RPL18
TTC39B
MARCKS
DHX8
CCDC167
PWWP2A
TRIM38
NTN1
WBP1L
FAM200B
GLDC
DNAJC7
NKIRAS2
PLAAT4
PALM2AKAP2
CCN2
SFPQ
SLC24A3
RGCC
ATAT1
VPS35L
GADD45A
ASMTL
SF3A2
PLEKHJ1
VOPP1
ZNF254
DHRS3
PSME2
EMC9
CTBP2
ENO1
RAI14
FERMT1
PITX2
CLDN23
CNN3
TBCA
SLN
TIMP4
SLC16A12
NGRN
SMCO1
CPT1A
GLI2
HELLS
SLC29A1
MYMX
SMPDL3B
LRFN3
BAZ2A
FOXO6
STRA6
PTX3
KDELR2
AHSG
ANKRD40
PKNOX2
CTBS
IL34
SFRP1
OGA
VEPH1
ITM2B
PRKRIP1
WBP11
C12orf60
NEMF
MACROH2A2
MCCC1
ECE1
ZNF682
VASH2
PCDH8
TLL1
CALD1
RND1
ZNF737
SYT16
PANK2
TNFSF4
CEP131
CCL2
WLS
USO1
IP6K2
RERE
LBP
TMEM33
ITFG2
TMEM258
FEN1
INSM1
POLB
RHBDD2
EMD
AGFG2
PLA2G1B
MYT1
MYO18A
FIBP
CCDC85B
SP8
TTBK1
NAT1
TOX3
C1R
HNRNPUL1
RGSL1
TSC22D1
SAPCD1
WNK3
PPP2R3A
DISP3
SELENOP
VPS37B
DSCC1
ZNF85
RND2
OSTM1
LIN28A
SHROOM3
HNRNPC
MRPL34
ANP32B
DDA1
MTHFD1
SLC25A18
MYBPH
DGKB
PTCD2
MRPS27
HMGN1
ZCCHC14
C9orf62
MAST4
EFCAB8
CDKL1
ZNF486
ZFP36L1
RAB4B
MIA
ERICH6B
CAMTA1
CHMP7
TSNAXIP1
RANBP10
PQBP1
TIMM17B
CANT1
ITGB3
NKX1-2
SNAPC3
SLAMF1
EIF3F
MYH9
GGPS1
ARID4B
PACSIN3
FAM185A
TSEN2
CSNK1A1L
ZNF814
CCNB1IP1
FAM13A
ZMAT2
INSYN2B
CXCR1
CDHR3
TMEM114
BAMBI
HERC2
CAPN3
TMEM43
CHCHD4
CFAP20
RIPK4
KPNA2
CDK16
CBR4
CERS5
LOC390877
GTF2F1
POSTN
ESX1
HSPA13
SLX4IP
MKKS
SPEF1
STK3
OSR2
GAST
ERGIC2
BTBD3
VCP
PEX5L
CRB2
UXS1
POU2F1
ATXN3
SOD2
MAPKAPK2
WTAP
FAM98A
PUM1
SLC25A21
TMEM237
TLE1
PTPRZ1
BCAT1
DACT3
POMGNT1
AIFM1
TP53AIP1
AKIRIN2
KIAA0895L
PAG1
ZNF43
DISP1
TRNP1
AFF1
NUP205
ABCB1
TMUB2
PAK1
OR5F1
USP54
SYN3
ACYP2
PSME4
CELA3B
ZNF677
VN1R2
PER2
ZNF627
ERVH48-1
SPIRE1
BLOC1S4
LAMP5
ZNF561
GNA13
GPR179
TPCN1
KATNAL2
ATN1
NONO
GXYLT2
YAF2
ABLIM1
LITAF
LCK
FZD9
ENOX2
LIMCH1
ZCCHC12
EEA1
MEF2A
CCDC77
MACROH2A1
GRIN3A
CNNM4
REC8
MEF2D
EPB41L4B
TSPAN19
LRRIQ1
ZSCAN12
FBLN1
IKZF2
SPAG9
GTPBP6
KXD1
LRRC23
RGS12
FAM76B
CEP57
OSGEP
APEX1
ACADM
SUGP2
ARMC6
FAM110B
STX16
ZNF184
PGAP2
ISL2
PRKCA
HNRNPDL
ENOPH1
ADNP
ZBTB26
ZNF268
PGAM1
GCNT4
RNASE9
WDR44
OARD1
NFYA
H4C9
IGF2BP3
PDE7A
PTPRF
SIX2
HSBP1L1
SERPINA11
PNPLA3
WFDC1
FOXL2NB
FOXL2
SLCO5A1
PPME1
C2CD3
HEXIM2
GTF2H4
SOX14
PRRC2A
AIF1
LMBRD1
EXT1
CHCHD3
MRPS30
TCF20
EXOSC2
UBA1
G3BP1
GDF5
CEP250
CALM2
PEX11G
DPP4
ZNF253
SELENOF
HS2ST1
CCDC130
TPST2
CTTNBP2NL
IPO11
ANKHD1-EIF4EBP3
ANKHD1
PELI1
KLHL4
RNF20
SEPTIN9
GOLPH3L
CEP164
LRRC4C
DLGAP4
SPEG
ZSCAN9
PTPRN
PDE4B
ZBED5
CDC7
ZNF630
TRADD
HSF4
FBXL8
HOXD13
HOXD12
ZNF589
NEK10
VRTN
KLHL5
IP6K1
ZBTB40