ChIP-Atlas: Target genes

Potential target genes for SOX2

Query protein: SOX2
Distance from TSS: ± 1 kb  ± 5 kb  ± 10 kb
Sort key: SRX130061 | BJ
 
Color legends
  1000 750 500 250 1 0  (Values = Binding scores of MACS2 and STRING)

Download: TSV (text)
Links: Movie and Document for ChIP-Atlas Target Genes
SOX2's Target genes

◢ SOX2: Average

◣ SRX130061: BJ

◢ SRX10407083: Esophageal squamous carcinoma cell line

◢ SRX10407084: Esophageal squamous carcinoma cell line

◢ SRX5286338: ES cells

◢ SRX5286339: ES cells

◢ SRX5286342: ES cells

◢ SRX5286343: ES cells

◢ SRX11904439: H29

◢ SRX11904440: H29

◢ SRX6852812: HCC2814

◢ SRX277137: HCC95

◢ SRX6852810: HCC95

◢ SRX3205373: Head and neck squamous cell carcinoma 

◢ SRX702105: hESC derived mesendodermal cells

◢ SRX702106: hESC derived mesendodermal cells

◢ SRX702108: hESC derived mesendodermal cells

◢ SRX1047416: hESC derived neural cells

◢ SRX11919277: hESC derived neuromesodermal cells

◢ SRX011616: hESC H1

◢ SRX1047413: hESC H9

◢ SRX277140: hESC H9

◢ SRX6101128: hESC H9

◢ SRX6101129: hESC H9

◢ SRX266860: hESC HUES64

◢ SRX266861: hESC HUES64

◢ SRX702107: hESC HUES64

◢ SRX702109: hESC HUES64

◢ SRX20532164: hESC HUES8

◢ SRX20532165: hESC HUES8

◢ SRX5286340: hESC WIBR2

◢ SRX5286341: hESC WIBR2

◢ SRX5286344: hESC WIBR2

◢ SRX10101684: hESC WIBR3

◢ SRX10101685: hESC WIBR3

◢ SRX8026053: hESC WIBR3

◢ SRX8026055: hESC WIBR3

◢ SRX968908: iPSC derived neural cells

◢ SRX968909: iPSC derived neural cells

◢ SRX968910: iPSC derived neural cells

◢ SRX968911: iPSC derived neural cells

◢ SRX968912: iPSC derived neural cells

◢ SRX1813586: iPS cells

◢ SRX1813587: iPS cells

◢ SRX20140858: iPS cells

◢ SRX20140859: iPS cells

◢ SRX512370: iPS cells

◢ SRX6852811: KNS-62

◢ SRX10035162: KYSE-140

◢ SRX10407085: KYSE-70

◢ SRX277131: KYSE-70

◢ SRX6852808: LK-2

◢ SRX6852813: LK-2

◢ SRX6852814: LK-2

◢ SRX026880: LN-229

◢ SRX359955: LoVo

◢ ERX2260038: Lung cancer

◢ ERX2260040: Lung cancer

◢ ERX2260044: Lung cancer

◢ ERX2260046: Lung cancer

◢ SRX2731713: Lung cancer cell line

◢ SRX6750797: MDA-MB-231

◢ SRX6750798: MDA-MB-231

◢ SRX1813580: MRC-5

◢ SRX1813581: MRC-5

◢ SRX1813582: MRC-5

◢ SRX1813583: MRC-5

◢ SRX1813584: MRC-5

◢ SRX1813585: MRC-5

◢ SRX2732210: MRC-5

◢ SRX2732211: MRC-5

◢ SRX5771664: N2102Ep

◢ SRX5771666: N2102Ep

◢ SRX5771668: N2102Ep

◢ SRX11904443: NCI-H1836

◢ SRX11904444: NCI-H1836

◢ SRX6852809: NCI-H520

◢ SRX11904441: NCI-H82

◢ SRX11904442: NCI-H82

◢ SRX10445285: Neural crest cells

◢ SRX10445293: Neural crest cells

◢ SRX10445303: Neural crest cells

◢ SRX10445312: Neural crest cells

◢ SRX20140860: Neural progenitor cells

◢ SRX20140861: Neural progenitor cells

◢ SRX20140862: Neural progenitor cells

◢ SRX20140890: Neural progenitor cells

◢ SRX20140891: Neural progenitor cells

◢ SRX20140892: Neural progenitor cells

◢ SRX5716451: Neural progenitor cells

◢ SRX5716452: Neural progenitor cells

◢ SRX5716453: Neural progenitor cells

◢ SRX330107: ReN-VM

◢ SRX330108: ReN-VM

◢ SRX277134: T.T

◢ SRX3367070: TE-5

◢ SOX2: STRING

MTRNR2L2
MSH3
DHFR
RGPD1
RGPD2
EEF1A1
MTRNR2L8
EMILIN2
MTRNR2L10
MTRNR2L1
MTRNR2L9
VCPKMT
TESK2
CD22
MTRNR2L6
RNF125
TMEM87A
GANC
PCGF3
EPB41L2
MAMDC2
HK1
SPON2
GID4
ATPAF2
CEP164
BACE1
DEFB107B
DEFB107A
DEFB105B
DEFB105A
PTGER3
FIGNL1
PCDH9
OR10A6
DIPK1A
KCNK1
ZNF397
TMEM242
MCF2L2
USP30
ACSF2
RPL6
PTPN11
EXOC6
ERGIC2
MUC5AC
CNGA1
NUTM2D
DRD1
RAB6A
FOS
NRCAM
TTBK2
FLRT2
FNDC3B
OR7A17
FRMD5
ESM1
OTUD7B
PTPN1
CSPP1
CTAGE9
SH3BGRL2
SACS
TLR4
ALG5
PHOX2B
DACT3
RNF113B
CAAP1
NFAT5
LTF
KDM3A
GRIP1
SIK3
PCDHGA2
FAM120B
ATP6V0E1
MAPK10
CERS6
SLC8A1
A4GNT
RAB23
KDM4D
CWC15
SMC1B
RIBC2
ASXL2
TGM5
TMEM263
HMGB1
USPL1
ABCB1
RAB3IP
MYC
SAP18
ANKRD53
MRGPRE
SPTLC2
DHCR24
CDC42EP3
CCDC171
OR13C2
ZNF80
ABCF2
CHPF2
AMACR
SPRTN
EXOC8
SLC2A12
NUP153
SLX4IP
MKKS
COPS7B
SIGLEC15
DPP3
TMEM196
EFCAB1
KRTAP1-1
LSG1
KRTAP2-1
ZNF615
KIF4B
PERP
TAF4B
CMTM6
RHOB
GMPR
TRPC4
PRDM7
RASAL2
DIABLO
STEAP1B
CHAMP1
PRKACB
SLC9B2
RFPL4B
CR1
YWHAZ
MRPL35
NPM3
WDR75
NFATC3
RAPGEF4
SETMAR
H4C11
NPFFR1
CDKAL1
ARHGAP22
ALKBH5
SLAIN1
RCN2
AGR2
SCAF4
RBFOX2
PTPRB
LATS1
SENP7
VNN2
IL17A
SF1
DTX4
HCRTR2
MIPOL1
FRMD3
SRPRB
TNFRSF19
DNAJB2
NEK8
CIBAR1
GOLGA6L7
EMC10
MRGPRX3
ZNF385B
UBE2D3
CEP85
POPDC3
ZNF319
USB1
MYOT
DKK3
STEAP1
TMEM219
ROBO4
NLRP1
RERE
CAV1
EPB41L5
RABGAP1L
CDC42SE2
OR4F5
PROC
EXOC5
AP5M1
FGF5
PURA
CMAS
MED9
CEP78
MICB
KRTAP2-4
KRTAP2-3
ZNF337
ZNF74
HDHD2
LIG4
ABHD13
THAP12
GVQW3
DEFB134
ZNF214
NLRP14
SELENOI
ADGRF3
FBXL4
DUX4
WLS
MNAT1
RAB21
SYT2
ABL2
S100A16
ZFYVE1
CYB5R2
FBXO11
AHCYL1
KANSL1
OPALIN
PRIM2
OTUD1
PRPF39
CALU
S100A14
NEUROG2
B3GALNT1
SHISA9
OR6C2
CCDC9B
NRG1
EID1
ARID1A
CSAD
TAAR2
CHGB
RRAS2
DLC1
ZNF570
ZNF569
PSMC6
ARSJ
WASHC2C
SOD2
WTAP
MTMR6
GJA9
MMP16
FGD3
METTL3
WDR26
AGAP5
SESTD1
VPS26B
NCAPD3
PDIA5
NCOA6
GPR107
SEPTIN2
HDLBP
LRRC36
CMTM1
SMIM14
RNASE9
RNF217
DMAP1
RXRG
ANKRD10
TMEM252
SCG2
SYN3
DDX52
ANXA2
BTN3A2
MPHOSPH8
PPWD1
CENPK
HMCES
SOX2
TSC22D1
PRR23D2
PRR23D1
UBE2K
WNK1
POU6F1
PDE4B
FRAS1
MAP3K7CL
NCKAP1
ERBIN
SOX6
TRIT1
SP9
IGDCC3
ARID1B
SKA2
PRR11
SEC22C
PFKP
CMYA5
KRTAP10-7
IGSF11
COPS4
FAM53B
COBLL1
NKTR
URI1
FBXL20
TEX55
COL6A3
UTP23
CALCRL
CPM
IL21
PHF3
TRAK1
MANF
FBXL14
SLC19A2
F13B
CALD1
ARHGAP24
PPP1R8
BAZ2B
YWHAE
ODAPH
RAP1A
FRMD4A
SPECC1
PRRC1
PRRC2C
ZNF852
SESN1
GOPC
PSG11
USP10
MRPS9
ANKRD13D
DHX33
LRRC58
NLRP10
C10orf120
ENOX1
NREP
GORAB
POGK
NTRK2
CNOT6
KIF15
KIAA1143
NPY1R
ENTPD7
RBM7
C11orf71
MAML2
STPG2
STARD6
C18orf54
CROT
NEDD8-MDP1
NEDD8
GMPR2
EFCAB3
STK31
LYPLAL1
TBC1D23
PARP2
UFM1
TMED5
CCDC18
CDH11
TNIK
TSEN15
TRIM23
TRAPPC13
SHLD3
SLC5A7
OR4F6
SPATC1L
ANK3
FABP6
CIZ1
SPA17
SIAE
SFXN2
ARL3
UBAP1L
SLC43A3
TP53TG5
OR2K2
FBXO25
ADAMTSL1
CREBL2
FAM122A
SCG3
DDX46
RREB1
RSAD1
PSG6
ECT2
KLF5
ZNF624
RETREG1
IAPP
CNTLN
CDYL
NEK3
SLC7A11
HNRNPR
MEF2A
EPHB6
FAR2
FRG1
THYN1
ACAD8
VPS13D
RPN1
C16orf95
DLX5
PTPRO
BORCS7
G2E3
KIAA0895
ANLN
SLC38A4
SLC10A7
PIGL
NCOR1
FGF20
ATP6V0D2
TRAPPC3L
TNNI3K
CLEC14A
AGAP4
CLASP2
MED23
FBXW7
MAGEF1
NTN4
TCTE3
ERMARD
DGKH
LAMTOR5
MERTK
COA3
CNTD1
ALPK1
CAPNS2
BAAT
SPAST
KDM1A
ACIN1
PLA1A
C14orf119
BUB3
ARHGAP32
SLC17A5
STIM1
DYNC1H1
DBT
TMCC1
TIAM2
ITM2B
FJX1
TSTD2
NCBP1
COL4A2
COL4A1
MFF
ELF1
CD58
ITGAV
CEP57L1
EHHADH
EIF5
FBXL17
SRP72
PSG2
KRT86
ADGRL2
DDHD1
KATNBL1
TTC9C
BSPRY
TPBG
GLYATL2
GIMAP7
FABP9
EBLN2
BHMT
SMCHD1
TPD52L1
CDC6
TFAM
GTF2H5
NIPAL2
SLC16A7
ARPC1A
IGF1R
C18orf12
SIPA1L2
TAS2R39
ARL6IP1
GPATCH8
SLFN11
TRPM6
TXLNB
REG4
GET1-SH3BGR
GET1
SCGB1C1
UQCRH
LRRC41
CTSC
ARMC5
ESPNL
ACER3
VPS33A
MCOLN2
KLRD1
SGPP1
SREK1IP1
CWC27
TMEM255B
ZFY
OMD
MSMB
MRNIP
CXorf38
SMARCA2
DTNA
TPM3
P2RY14
PTK2
KIAA1217
LLPH
PRKG1
MTF2
ST18
FAM200B
FMN1
C12orf73
ANKRD44
JAK1
TRAF3IP2
ST7L
CAPZA1
UEVLD
ARCN1
OR52L1
ALDOB
COA6
ATXN7L1
RAB7B
SHOC2
BBIP1
MAF
LIN9
POM121L2
ZNF234
SORT1
TP53INP1
PTHLH
SPDYA
WASF3
HIF1AN
NDUFB8
PSME3IP1
GAS2L3
POGZ
SETDB2
CAB39L
CSTA
ZFYVE9
IARS1
HHIP
ANO3
NHSL1
MAT2A
TAF7
RPS20
MACO1
BDP1
STPG4
CRISP1
ZNF532
NBEAL1
GATB
TNIP3
TWIST1
GPAM
CLUL1
P2RY12
DENND6A
LRRIQ3
FPGT-TNNI3K
FPGT
NAT1
ARL15
TMEM248
HMGCS2
GLYATL1B
DYNLL1
KIF27
LCLAT1
TLK1
FNTA
SRSF9
TJP1
ZBTB44
JMY
CDIN1
FRA10AC1
HARBI1
ATG13
ZNF136
LOX
MBD2
SOX9
FAM222B
LIN28A
LRIG3
TMC1
RCOR3
CLDN10
SPECC1L
LIMS1
RNF130
RNF115
POLR3C
UBB
HPS4
FRYL
ZNF326
SEC16B
PTS
CNOT10
MBTPS1
TMOD3
KIF3A
PLEKHM3
TMED9
BTG3
LEO1
HCLS1
SLC36A1
CPS1
STK38
GCA
NAP1L1
KRTAP4-12
OR2A12
PRR4
CACNB2
DOCK9
PPP3R1
SLC13A2
CASP3
PSMF1
SLK
TRIP12
FBXO36
H3C15
H3C14
H2AC19
H2AC18
NUFIP2
FREM1
LOC107986453
BRWD1
H2BU1
H2AW
RPS27A
CLHC1
PPP4R3B
RALGPS1
GPR52
CUL1
CCZ1
POU5F2
TAS2R10
OR10Z1
CREB1
RCN1
DCAF4L1
COX8C
IGF1
BDH1
ZFP62
NUMB
CENPF
C1orf94
USP42
KATNAL1
EPSTI1
CCDC68
DAGLB
ZNF367
EXD1
CHP1
PCID2
CUL4A
NAA50
ATP6V1A
MYO10
AADAT
TMEM117
PIGF
CRIPT
RAB4A
TNFAIP6
MACC1
PDCD5
CCDC81
PPARG
HNRNPLL
FAM133B
THEMIS
TSC22D2
MEOX2
OAS2
FBXO42
CFAP20DC
LSM12
TMEM65
RABGAP1
MIER1
DNAI4
MEPE
CLDN12
SLC35F5
PPT1
ZFX
NRBF2
ZNF583
EGLN1
UTP4
DERPC
CHTF8
GGNBP2
MSANTD4
ATP13A3
FAM111A
TTC8
SCAMP1
GNAQ
VSTM5
HOMEZ
CHRM5
CUEDC1
PDE4D
SH3PXD2B
PHACTR4
PAK2
KRIT1
ANKIB1
CAPN2
SGK1
RABGEF1
AKNAD1
SBNO1
TRIM26
COX7A2L
TRIB3
CYP2U1
STAM2
TTK
NR3C1
MED7
CRIP3
TPX2
LRRC66
IFNA5
KRTAP3-1
PRKCA
ZNF84
TBC1D19
FAM210B
IDE
VEGFC
MCUR1
MCM6
KMT2E
ZC3H8
CAPRIN1
SGMS1
EBAG9
FAM168A
PPM1B
IQSEC1
NACA
GAS2
TP53
WRAP53
HIPK3
RBM12
CPNE1
YOD1
PFKFB2
C12orf65
RWDD2A
PGM3
VDAC3
MRTO4
EMC1
SHISAL2B
OR6C4
MAST4
ZNF814
C9orf135
DHRS7
PLCE1
HSD3B1
MAP10
MRPS33
GASK1B
HELLS
TNFRSF11A
GPR1
NOL8
CENPP
KLHL20
SERPINB11
ZNF565
RIMKLB
TBCEL-TECTA
TBCEL
FUT8
ZNF146
CDK1
COMMD8
NDEL1
RPF2
UHRF2
FCGBP
DLGAP1
RIPOR2
ABCD3
HERC1
ACAP2
LYSMD2
TIE1
NUBPL
JAM2
BLID
EIF4E
TDO2
GDF11
GBX2
ZCCHC4
KBTBD2
VMP1
PTRH2
TAOK1
LOC100506422
TMEM258
FEN1
NTPCR
TASOR
ROBO1
TM9SF3
PGM5
SYDE2
SNIP1
ADH4
CEP162
CXCL6
OR6X1
RAB11FIP5
RCL1
CHRNE
ILF2
TUBA1A
TET2
RPL34
TBCK
AIMP1
RPS27L
CD86
SCOC
WDR25
WARS1
MINPP1
VPS13A
SCP2
AKIRIN2
VEPH1
MICA
NDUFB4
NBPF1
RGS7BP
H2BC4
H2AC6
XKR6
BLM
JRKL
CCDC82
CABCOCO1
GLRX3
BATF
ADGRG6
RACGAP1
MPC2
DCAF6
MOK
RNF14
CRTAM
PRR14L
PPP4R1
SPOCK1
ZNF821
ZMYM2
TFDP2
TACC1
COMMD7
LANCL1
CHRM2
SET
RPL36AL
MGAT2
UGT1A9
KCNC2
PTCHD4
MLF1
LOC102723360
C16orf72
CHD1
CNTRL
CDC27
VRTN
MORC3
HNRNPA2B1
CBX3
ICE2
TMEM106A
C2CD4A
SLC22A15
C3orf70
VPS13C
MTMR10
DNAJC15
PRPS1L1
ZBTB38
SLC12A2
WASHC1
OR4F4
CBL
ATP5F1A
SLITRK6
NDUFV2
NIM1K
INTS13
RIOK1
CAGE1
CHSY3
PRPH2
CCDC14
FAM200A
ZNF516
RAE1
NBPF3
AHCYL2
PAFAH1B1
FAM153B
MSL2
ENAM
RUFY2
RNF4
STARD3NL
SERPINB4
TMEM30B
RELL2
HDAC3
C1QTNF7
SDHD
PTPRK
NOL6
SF3B5
UBA1
GBP3
MARK3
MORN2
DHX57
MAPK4
GOLGA7
ROS1
JMJD1C
RRS1
ADHFE1
NRARP
REST