ChIP-Atlas: Target genes

Potential target genes for SOX2

Query protein: SOX2
Distance from TSS: ± 1 kb  ± 5 kb  ± 10 kb
Sort key: SRX6101128 | hESC H9
 
Color legends
  1000 750 500 250 1 0  (Values = Binding scores of MACS2 and STRING)

Download: TSV (text)
Links: Movie and Document for ChIP-Atlas Target Genes
SOX2's Target genes

◢ SOX2: Average

◢ SRX130061: BJ

◢ SRX10407083: Esophageal squamous carcinoma cell line

◢ SRX10407084: Esophageal squamous carcinoma cell line

◢ SRX5286338: ES cells

◢ SRX5286339: ES cells

◢ SRX5286342: ES cells

◢ SRX5286343: ES cells

◢ SRX11904439: H29

◢ SRX11904440: H29

◢ SRX6852812: HCC2814

◢ SRX277137: HCC95

◢ SRX6852810: HCC95

◢ SRX3205373: Head and neck squamous cell carcinoma 

◢ SRX702105: hESC derived mesendodermal cells

◢ SRX702106: hESC derived mesendodermal cells

◢ SRX702108: hESC derived mesendodermal cells

◢ SRX1047416: hESC derived neural cells

◢ SRX11919277: hESC derived neuromesodermal cells

◢ SRX011616: hESC H1

◢ SRX1047413: hESC H9

◢ SRX277140: hESC H9

◣ SRX6101128: hESC H9

◢ SRX6101129: hESC H9

◢ SRX266860: hESC HUES64

◢ SRX266861: hESC HUES64

◢ SRX702107: hESC HUES64

◢ SRX702109: hESC HUES64

◢ SRX20532164: hESC HUES8

◢ SRX20532165: hESC HUES8

◢ SRX5286340: hESC WIBR2

◢ SRX5286341: hESC WIBR2

◢ SRX5286344: hESC WIBR2

◢ SRX10101684: hESC WIBR3

◢ SRX10101685: hESC WIBR3

◢ SRX8026053: hESC WIBR3

◢ SRX8026055: hESC WIBR3

◢ SRX968908: iPSC derived neural cells

◢ SRX968909: iPSC derived neural cells

◢ SRX968910: iPSC derived neural cells

◢ SRX968911: iPSC derived neural cells

◢ SRX968912: iPSC derived neural cells

◢ SRX1813586: iPS cells

◢ SRX1813587: iPS cells

◢ SRX20140858: iPS cells

◢ SRX20140859: iPS cells

◢ SRX512370: iPS cells

◢ SRX6852811: KNS-62

◢ SRX10035162: KYSE-140

◢ SRX10407085: KYSE-70

◢ SRX277131: KYSE-70

◢ SRX6852808: LK-2

◢ SRX6852813: LK-2

◢ SRX6852814: LK-2

◢ SRX026880: LN-229

◢ SRX359955: LoVo

◢ ERX2260038: Lung cancer

◢ ERX2260040: Lung cancer

◢ ERX2260044: Lung cancer

◢ ERX2260046: Lung cancer

◢ SRX2731713: Lung cancer cell line

◢ SRX6750797: MDA-MB-231

◢ SRX6750798: MDA-MB-231

◢ SRX1813580: MRC-5

◢ SRX1813581: MRC-5

◢ SRX1813582: MRC-5

◢ SRX1813583: MRC-5

◢ SRX1813584: MRC-5

◢ SRX1813585: MRC-5

◢ SRX2732210: MRC-5

◢ SRX2732211: MRC-5

◢ SRX5771664: N2102Ep

◢ SRX5771666: N2102Ep

◢ SRX5771668: N2102Ep

◢ SRX11904443: NCI-H1836

◢ SRX11904444: NCI-H1836

◢ SRX6852809: NCI-H520

◢ SRX11904441: NCI-H82

◢ SRX11904442: NCI-H82

◢ SRX10445285: Neural crest cells

◢ SRX10445293: Neural crest cells

◢ SRX10445303: Neural crest cells

◢ SRX10445312: Neural crest cells

◢ SRX20140860: Neural progenitor cells

◢ SRX20140861: Neural progenitor cells

◢ SRX20140862: Neural progenitor cells

◢ SRX20140890: Neural progenitor cells

◢ SRX20140891: Neural progenitor cells

◢ SRX20140892: Neural progenitor cells

◢ SRX5716451: Neural progenitor cells

◢ SRX5716452: Neural progenitor cells

◢ SRX5716453: Neural progenitor cells

◢ SRX330107: ReN-VM

◢ SRX330108: ReN-VM

◢ SRX277134: T.T

◢ SRX3367070: TE-5

◢ SOX2: STRING

SMARCA2
DPPA5
TRIP4
PCLAF
FBXW11
GDF11
REST
MED12
TMPRSS11E
JPT1
ARHGEF38
SPIC
ZNF483
MTF2
RIF1
SOX6
UGT1A6
ITGB3
NRG1
RPL8
ZNF517
NCDN
KIAA0319L
SLC35A5
ATG3
FAM222B
MYSM1
CD99L2
TIAM2
ZFP3
OBI1
ZNF343
TUBB4A
ANKRD1
MRPL20
DDX43
UBAP2
CRYGB
PUF60
TNFSF8
CMTM4
KLF5
AIRE
ATG9B
ABCB8
SPTLC2
MSL2
MRS2
TRIM2
CELF4
FAM200B
UTF1
RMND5B
PRICKLE1
CFLAR
SAMHD1
ESR2
BFAR
PTAR1
GINS3
VSIG10
NLRP7
MFSD4B
DENR
VANGL2
ZNF398
NDUFV1
PRODH
LOC102724788
FLAD1
WDHD1
SOCS4
GSN
ZNF875
MRPL18
PROM1
PNLDC1
ZBTB18
SHCBP1L
MROH7
PRDM14
DUSP12
ZNF335
SLC25A16
CCDC130
OR6C3
NADK
APOBEC3F
TALDO1
ZSWIM3
ACOT8
NDUFAB1
NES
ABCC10
NFKB2
C10orf95
PMEPA1
AASS
KIFBP
ZNF729
ATAD3B
ZNF565
MTRNR2L1
SOX5
TPCN2
UPP1
GALNT8
BTG2
PALM2AKAP2
SNAPC3
FUBP1
DNAJB4
RMND1
ARMT1
PSORS1C2
C19orf25
GNAI2
FAM20A
ZNF649
ZCCHC4
MTHFD1L
PTPRN
TBL1XR1
GLDC
TET3
SLC2A11
SLA2
UNC13B
MMACHC
CCDC163
KRBA2
GP5
FOXP1
NCOA7
MOG
TDGF1
SCGB1D1
MT1E
NCBP2AS2
NCBP2
PDCD7
SLC16A10
FEZ2
DND1
GUCA1A
ZNF318
STMN1
ZNF552
ZNF696
SNRPN
SLC23A2
BIN2
PCLO
ID3
ZNF469
SRSF12
MBOAT2
ATMIN
AGO1
SLTM
PRRC2B
SDHC
IER5L
PDCL
DLX6
SLC35G4
DEFB124
SFRP2
FGD4
ITGB5
LRRTM4
HNRNPL
LARP1
TMEM229B
SNX19
AGL
LRRC74A
MGLL
NPSR1
OAT
ETS1
RASA1
GJA1
FBXO40
SLC35G5
ZCCHC3
RASSF8
ARRDC2
FAM227A
CBY1
MRGPRX3
TMC5
APOBEC3G
ZFP64
PRAMEF17
PNCK
OR6J1
ARHGAP19
RTN4
PTPN12
SGMS2
SOAT1
NOTCH1
SNAP23
CNR2
DEFB108B
NEPRO
RNASE10
LINGO1
GABRQ
C2
CATIP
DNMBP
PUS1
LDAH
LIPK
C5orf60
CCL2
RPUSD3
ABL2
FOXN3
KHDC1L
ZNF385B
HOXD13
HOXD12
SYN3
SLC3A2
ZNF90
DPPA2
FASTKD1
MAPRE3
DNTT
DUX4
CCDC85A
YIPF4
RIMKLB
RPGRIP1L
FTO
WDFY2
S100A16
GLIPR2
PRKAA1
LDLRAD1
MARCHF8
GRAP2
TRAPPC8
SCHIP1
RASGRF2
SUCO
IFRD1
AKIRIN2
PHC1
C1R
SLC35F6
SOX2
OR5AR1
SPATA45
TRIM24
DISP3
DERA
TAF13
XBP1
F11R
DDX39A
GJA10
FRAT2
ZMAT2
PRPS1
SPRY2
FGFR3
DAGLB
AK4
MPI
HCAR2
FAM193B
ACYP2
PSME4
LEFTY2
OAZ3
PMS2
AIMP2
SMAGP
TFAP2C
ZMIZ2
MS4A12
ZNF460
CRYZL2P-SEC16B
THOC2
GIMAP5
SET
PSRC1
TRIML2
SLAMF1
ERVH48-1
IGFALS
AP2B1
ZIC4
NTAQ1
CSPP1
ALDH1A2
ADA2
ASH2L
PRKAG2
RBBP9
SLC38A9
RFC4
SH2D4B
ANKDD1B
CNGA1
NIPAL1
PRDX3
TMEM202
HYOU1
OR8B3
GOLGA6D
MVB12A
CYP1A1
FZD8
TSSK4
RMDN2
ZC3H12B
SLC7A7
DTD1
CLEC4A
ASIP
MDK
PNISR
COLEC11
MS4A1
CTNNA3
NNT
NFE2L3
DEFB107B
DEFB107A
SSH1
ZNF532
EVA1B
BCOR
STMN2
SHISA5
CAPN3
IFITM3
IFITM1
SULT1B1
ATG5
PCDHGB2
PCDHGA5
CLDN9
SEC22B
ZNF37A
SALL3
LGR6
ADCK1
TUBB
MDC1
L1TD1
WDR25
WARS1
SEC63
SERF2
ELL3
DCAF4L1
GAST
CLEC9A
VPS37C
RTP3
METTL16
E4F1
PGP
SLCO4C1
SESTD1
NUP205
CKAP5
HYAL1
PINK1
SEPHS2
NECTIN4
CDX2
SAPCD2
VIT
UAP1L1
HLA-F
FAM169A
PIN4
VMO1
GLTPD2
CAAP1
CYTH2
UFD1
CDC45
TULP4
ZNF600
LHFPL5
CLPS
MRPS36
FERMT1
HACD2
EPB41L4B
TAX1BP1
KCNQ5
CCDC169-SOHLH2
CCDC169
SYT2
EXT1
LIN28A
KRT8
LRTM2
ELP6
LGALS4
CENPS-CORT
CENPS
ETV4
GCNT2
PRR13
ATG7
TMX2
MED19
EML2
ZSCAN2
IQGAP2
SPAG5
GGTLC2
RAPH1
TCF7L1
C8orf58
ARHGAP42
SLC25A18
CCR8
GDF3
RNF212B
SUCLA2
SLC35G3
SHPK
CTNS
CSNK1D
VAMP1
PARP1
LZTS1
ZNF296
GEMIN7
YAF2
GALNT3
STX18
ORC2
FBXL19
PEA15
FGF4
INKA2
DDX20
TTC23L
BEND3
KRT82
ZNF341
POM121C
SPDYE5
SRSF7
RAB40AL
AARS2
BCKDK
AP1S1
GAD2
SLFN12
GLT1D1
NDUFAF3
DALRD3
MSLN
CNOT11
CHMP7
NAV2
COL26A1
YWHAE
VN1R4
DUSP6
RBM5
PRKAR1A
EIF4EBP2
GAS6
MX2
OR6S1
FOXO6
NCR1
TRAF3
CCDC200
PSME3IP1
FZD5
PLPP3
SRRM4
LYPD6B
CHI3L2
ZNF432
PYGB
IFI16
MTRNR2L2
MSH3
DHFR
IL34
DHRS3
AMOTL2
HOXB2
PRAMEF10
ZNF260
TTC9C
HNRNPUL2
TRIM22
TRIM5
SMARCB1
MACROH2A1
CAPRIN1
EMSY
SNX16
IQCF2
SENP2
CD101
INSM1
NEB
GNA12
TNFAIP8L1
CEP41
SMCO1
NANOG
DDX3X
ATP9B
DES
ZNF329
SLC20A2
SELENOT
CLDN20
MX1
F11
CEP85L
TMEM160
HDAC9
BLOC1S4
TMEM109
HLA-DRB5
FGD3
CACNA2D1
GADD45G
ZNF781
H1-7
POM121
SPDYE7P
ZNF777
CITED4
PTMA
SDCBP
RNF24
SERPINB6
ACSBG2
MED15
ADAR
ANXA3
MYRFL
RUNX1T1
LOC100289561
CLEC2L
SPDYE6
OR1E3
ZFP42
LEKR1
SH3PXD2B
GPRC5B
DGLUCY
SRCIN1
TSKS
AP2A1
DCLK1
NFYC
BTG1
GPR1
FBXO9
CILK1
WDR11
C7orf57
TMEM150C
C8G
LCN12
FBXW5
IQCF1
PCBP1
SELENOV
TRIM60
AADACL3
RPL11
GXYLT1
CCDC60
GTF2A1L
CLYBL
GOLGA6A
ZNF566
ARMCX5-GPRASP2
ARMCX5
CPB2
OAS1
CACHD1
ARHGAP18
ITPRIPL2
LRRC47
IFIT3
HEY2
TSTD2
NCBP1
TEX49
NAV1
ZNF584
ACOT6
ZC3H4
MAGT1
COX7B
TGIF2-RAB5IF
TGIF2
AASDH
CDYL
BBC3
SLC35E4
REX1BD
ZSCAN10
PPP1R8
TNP1
AP2M1
ZNF587
LACTBL1
PRMT2
SPATA4
PPM1A
CA13
CHN1
SNURF
ZNF664-RFLNA
ZNF664
CCDC92
ZNF140
FILIP1L
LINGO4
FLVCR2
ATP5F1E
S100A13
CANT1
RTN2
PPM1N
PPP2R5A
RCN1
AUH
CSRNP2
PGAP6
HHIPL1
CCDC85C
WASF1
CDC40
OLIG3
PPP1R3B
GBP1
CCR3
PSMD9
HPD
EFHC1
PHF19
PRSS41
MPPE1
PNKD
MYBPC1
ZNF440
MCL1
AAMP
C22orf39
OGT
ZNF281
IGSF1
UBN2
ALOX5
SOX14
NACAD
PADI6
NDUFB5
MRPL47
RIIAD1
SCGB3A2
CELF3
PXDC1
OR10AD1
NUP50
RPL3L
FRG2C
SLC2A14
OLFML3
PRND
MRPS23
ZNF416
ZIK1
PLEKHA3
FKBP7
SLC6A12
NARF
OR7D2
NUBP1
GNAL
NIT2
WWTR1
CYBC1
CORO1C
VENTX
PDHB
ZNF710
LUC7L2
FMC1-LUC7L2
FMC1
CCDC69
HMGCL
GGTLC3
LYPLA1
POGLUT2
ZNF814
LMAN2L
API5
MS4A13
IFT80
LNX1
NR6A1
S100P
CEP78
ST18
TFE3
THEM4
RESF1
LCA5
H2BC15
H2AC15
GPT2
DDR1
PPP2R3A
DUSP16
IGF1
PRPF8
TJP3
KLF7
ANAPC15
ZNF200
ALAD
ATP6V1G1
HLA-DRB1
APELA
GGTLC1
ZNF614
NBPF9
NMRK2
TACC2
KAT8
CAMKV
PRLHR
GCSAML
SCAF4
TP53
HEXIM1
RPS10-NUDT3
RPS10
TMEM50A
GRK6
DUSP8
NRBF2
ARHGEF11
GPD2
POLQ
PHLDB2
CDK17
TRIM64B
FLNB
C17orf98
CNNM3
VPS37B
SNX30
RPL23
SLC12A9
EPHB4
MACROD1
KDM4E
NRARP
LRGUK
RUFY1
TBC1D5
DCUN1D1
MRPS7
GGA3
H3C15
H3C14
H2AC19
H2AC18
MANSC1
TBC1D1
NUFIP2
SLC2A3
EFR3B
SLC7A5
ZNF436
CDC42EP4
SERINC5
SRPK2
UHRF1BP1
CCN2
GSAP
SHROOM3
ACBD7
LGALS12
GAB2
APOL1
PRR23D2
PRR23D1
ACSL6
DNAJC7
NKIRAS2
H3-2
STK35
SLC19A3
PLBD1
FOXR1
SH2D4A
PRAP1
LRRTM3
TGIF1
C5orf34
DUSP13
UBXN11
CD52
LPP
SGMS1
ALLC
FBP1
GXYLT2
MUS81
CFL1
EPB41L1
DSCC1
FNBP1L
PLD3
C19orf47
DLG3
SH2D5
LAIR1
TUBA3E
ZNF775
RNASE9
INO80D
HSBP1L1
RAD54B
TAGLN3
FSBP
ZNF263
PLAGL1
SH3BP4
NASP
VAMP8
INPP5F
NCLN
OR14I1
IL4R
CHFR
PEAK1
HMG20A
CFAP410
RIOX1
BCAM
GREM2
PLSCR4
ESRP1
APOBEC3D
APOBEC3C
ARHGAP36
EID3
GFRA4
SRPRB
FOXE1
CLIC4
FURIN
YBEY
MCM3AP
PLEKHM2
TMCC1
PRR15
RBM47
TXLNG
UFSP2
C4orf47
SYNJ2
PPA1
HSPH1
CCNG2
ZNF524
FIZ1
RBM41
RNASEH1
LPCAT3
DNMT3L
HESX1
HES3
ICMT
SAXO1
FRAT1
LEMD2
ZNF630
TM4SF1
TBCD
YPEL2
LOC112577592
UPF1
OLAH
MRPL48
ARL13A
PCDHA10
TMEM89
SLC12A3
UBQLN4
LAMTOR2
DUSP29
IER3
FLOT1
KMT2B
MAD2L2
DRAXIN
WDR44
GIGYF1
MAD2L1BP
GTPBP2
CLEC7A
IHH
EVI5
ADAM33
SOX13
AMT
SACS
LRRN1
TMEM43
CHCHD4
CD200
CDC25A
POLR1F
SP2
BRMS1L
SLC35A2
FARSB
FANK1
FNTA
SLC6A15
DPH6
SORT1
EXOSC9
ANP32B
SPART
GPR176
TMEM102
FGF11
ETV1
TMEM107
CSDE1
SRGAP1
KLHL12
FABP1
DEFB126
SORBS2
SULT6B1
CEBPZOS
CALD1
NCALD
TMEM167B
STOM
UBQLN1
LONP1
CATSPERD
ATP6AP2
PNPLA1
ETNK2
GPR146
CTBP2
OVOL2
SRR
SMG6
F2
AHCYL2
LMNA
KLF3
MEX3A
ANK3
DYRK1B
RAB3GAP1
PRDM1
CERS5
EFNA1
ATP6V1B1
MRPL52
ZNF592
GTF3C4
DDX31
CLEC12A
FIG4
AK9
CCDC90B
ARHGEF18
CHD7
PTTG1IP
FMNL2
WEE1
TMEM63A