ChIP-Atlas: Target genes

Potential target genes for SOX2

Query protein: SOX2
Distance from TSS: ± 1 kb  ± 5 kb  ± 10 kb
Sort key: SRX5771664 | N2102Ep
 
Color legends
  1000 750 500 250 1 0  (Values = Binding scores of MACS2 and STRING)

Download: TSV (text)
Links: Movie and Document for ChIP-Atlas Target Genes
SOX2's Target genes

◢ SOX2: Average

◢ SRX130061: BJ

◢ SRX10407083: Esophageal squamous carcinoma cell line

◢ SRX10407084: Esophageal squamous carcinoma cell line

◢ SRX5286338: ES cells

◢ SRX5286339: ES cells

◢ SRX5286342: ES cells

◢ SRX5286343: ES cells

◢ SRX11904439: H29

◢ SRX11904440: H29

◢ SRX6852812: HCC2814

◢ SRX277137: HCC95

◢ SRX6852810: HCC95

◢ SRX3205373: Head and neck squamous cell carcinoma 

◢ SRX702105: hESC derived mesendodermal cells

◢ SRX702106: hESC derived mesendodermal cells

◢ SRX702108: hESC derived mesendodermal cells

◢ SRX1047416: hESC derived neural cells

◢ SRX11919277: hESC derived neuromesodermal cells

◢ SRX011616: hESC H1

◢ SRX1047413: hESC H9

◢ SRX277140: hESC H9

◢ SRX6101128: hESC H9

◢ SRX6101129: hESC H9

◢ SRX266860: hESC HUES64

◢ SRX266861: hESC HUES64

◢ SRX702107: hESC HUES64

◢ SRX702109: hESC HUES64

◢ SRX20532164: hESC HUES8

◢ SRX20532165: hESC HUES8

◢ SRX5286340: hESC WIBR2

◢ SRX5286341: hESC WIBR2

◢ SRX5286344: hESC WIBR2

◢ SRX10101684: hESC WIBR3

◢ SRX10101685: hESC WIBR3

◢ SRX8026053: hESC WIBR3

◢ SRX8026055: hESC WIBR3

◢ SRX968908: iPSC derived neural cells

◢ SRX968909: iPSC derived neural cells

◢ SRX968910: iPSC derived neural cells

◢ SRX968911: iPSC derived neural cells

◢ SRX968912: iPSC derived neural cells

◢ SRX1813586: iPS cells

◢ SRX1813587: iPS cells

◢ SRX20140858: iPS cells

◢ SRX20140859: iPS cells

◢ SRX512370: iPS cells

◢ SRX6852811: KNS-62

◢ SRX10035162: KYSE-140

◢ SRX10407085: KYSE-70

◢ SRX277131: KYSE-70

◢ SRX6852808: LK-2

◢ SRX6852813: LK-2

◢ SRX6852814: LK-2

◢ SRX026880: LN-229

◢ SRX359955: LoVo

◢ ERX2260038: Lung cancer

◢ ERX2260040: Lung cancer

◢ ERX2260044: Lung cancer

◢ ERX2260046: Lung cancer

◢ SRX2731713: Lung cancer cell line

◢ SRX6750797: MDA-MB-231

◢ SRX6750798: MDA-MB-231

◢ SRX1813580: MRC-5

◢ SRX1813581: MRC-5

◢ SRX1813582: MRC-5

◢ SRX1813583: MRC-5

◢ SRX1813584: MRC-5

◢ SRX1813585: MRC-5

◢ SRX2732210: MRC-5

◢ SRX2732211: MRC-5

◣ SRX5771664: N2102Ep

◢ SRX5771666: N2102Ep

◢ SRX5771668: N2102Ep

◢ SRX11904443: NCI-H1836

◢ SRX11904444: NCI-H1836

◢ SRX6852809: NCI-H520

◢ SRX11904441: NCI-H82

◢ SRX11904442: NCI-H82

◢ SRX10445285: Neural crest cells

◢ SRX10445293: Neural crest cells

◢ SRX10445303: Neural crest cells

◢ SRX10445312: Neural crest cells

◢ SRX20140860: Neural progenitor cells

◢ SRX20140861: Neural progenitor cells

◢ SRX20140862: Neural progenitor cells

◢ SRX20140890: Neural progenitor cells

◢ SRX20140891: Neural progenitor cells

◢ SRX20140892: Neural progenitor cells

◢ SRX5716451: Neural progenitor cells

◢ SRX5716452: Neural progenitor cells

◢ SRX5716453: Neural progenitor cells

◢ SRX330107: ReN-VM

◢ SRX330108: ReN-VM

◢ SRX277134: T.T

◢ SRX3367070: TE-5

◢ SOX2: STRING

SMARCA2
NRG1
ZNF483
BTG2
LRRN1
REST
CACHD1
AMN1
TMPRSS11E
DPPA5
SAMHD1
ECE1
FBXW11
SOX6
MTHFD1L
RMND5B
CD99L2
EDDM3B
SPATA45
ETV1
METTL11B
SHCBP1L
ID3
ZSCAN2
ZNF398
LMCD1
SLA2
FGD4
ZSWIM3
ACOT8
TRAPPC8
FGF1
CDX2
GDF11
PHC1
OR5AR1
ARHGEF38
ANKRD1
GDF3
SLTM
DUSP6
APOBEC3F
FZR1
SFRP2
CRYGB
PUF60
DND1
ZFHX3
TCF7L1
PEAK1
HMG20A
RPH3A
ZNF343
MFSD4B
DNMT3B
TMC5
HESX1
JPT1
FGFR2
SLC35A5
ATG3
NES
SNRPN
SNURF
WFDC8
GXYLT2
IL34
CELF4
NTRK2
LHFPL4
FLAD1
NCDN
KIAA0319L
DCAF4L1
GAD2
TIMP4
MTRNR2L8
BCOR
PARP1
VENTX
NPSR1
SYN3
AK4
PREX2
TRPM1
SHISA5
TMEM43
CHCHD4
YIPF4
TDGF1
FBP1
RESF1
SOX14
TALDO1
CAPN3
RCN1
FAM222B
IFT80
FIGNL2
MRPL20
LIN28B
FZD2
PYGB
FRAT2
PIPOX
PSIP1
SEC14L5
RASGRF2
TRIML2
APOBEC3G
ZNF436
AEBP2
ZNF296
GEMIN7
PPP1R16B
CSF2RB
PRICKLE1
SLC23A2
SMPDL3B
CD24
CDC14B
CDC42EP4
MYSM1
L1TD1
MED12
ISOC2
UPF1
WDHD1
SOCS4
TRPC4AP
TRIM24
SYT2
PDCL
ITGB3
VCAN
TRIM2
GIMAP5
EXT1
HBG2
AGO1
ASH2L
CNGA1
NIPAL1
ABCB5
SRCIN1
CNR2
GOLGA6D
UGT1A6
NDUFAB1
PALM2AKAP2
NDUFV1
C10orf95
TET3
NAV2
MTM1
LEFTY2
SLFN12
NFE2L3
PPP2R3A
MAD2L2
DRAXIN
MAD1L1
OBI1
ZNF565
KLF17
ACCS
PITPNM2
SALL4
NATD1
REV3L
SNX19
DNMBP
SACS
HOXD13
HOXD12
YAF2
UTF1
PSMD9
HPD
SLC25A16
DPPA4
BEND3
KRT6B
C22orf39
RAD18
RIF1
LONRF3
LYPD6B
USP44
FGF2
MAGEB2
TBC1D16
IGBP1
ACOXL
MBOAT2
SMAGP
ZNF608
UHRF1BP1L
FAM20A
GLDC
GCSAM
JAML
CER1
CCDC169-SOHLH2
CCDC169
ST18
DHX32
B3GALT5
NACAD
PSMG3
PRRC2B
NECTIN1
ZFP3
FZD8
PAK1
RASA1
CDYL
SENP2
SOX2
MRS2
ZNF875
ZNF814
NADK
ITGB5
ARSL
ELOVL6
OLFML3
MOG
SLC46A1
METTL7A
PF4
PPBP
GABRQ
GABBR1
SLC10A2
SP7
NDST1
TRIB2
PCDHGC5
PCDHGC4
PDPN
PCDHB8
PCDHB16
PLEKHA5
SAMD5
ZNF781
MEIS2
DIDO1
DOK7
LEKR1
OVCH1
CAAP1
GSN
FAM180A
LIN28A
AGL
PCBP1
DENR
LRAT
VAPB
GPRC5B
CMAS
TMEM47
SOCS3
HES3
ICMT
SCAF4
PWWP3A
PRODH
LOC102724788
MDN1
BIRC6
BCAT1
FGF6
RNASE9
FGD3
ADAMTS16
MRPL18
RHBDD2
DNAJC7
NKIRAS2
KCNJ1
WDR44
ZNF200
AASS
ANP32A
PTAR1
AIRE
WDR49
TMEM167B
GABRB3
GOLGA6A
SLC20A2
NEPRO
CFLAR
SLC16A12
USP7
SYNPO2
FBXO40
TIAM1
ZIC5
PRDM14
TRIP4
PCLAF
CCL2
RNF186
CLDN9
SELPLG
RMND1
ARMT1
ANKRD40
IQCF2
REXO4
ADAMTS13
KRTAP5-9
IER5L
KCNIP4
KIAA1522
ALDH2
SVOPL
TP53
MBNL3
STX16
ACSBG2
DDX43
ESX1
UNC13B
ANK2
CYP2S1
CHFR
ZNF335
LBP
GADD45G
DHRS3
DCLK1
RAX
LINGO1
SRSF4
GJA1
MAP6
TCHP
SGMS2
ZNF438
PDE1B
HDAC9
GPR179
SLAMF1
ETV4
MVB12A
SUCO
HELLS
OAT
KDM2B
CCL26
INO80D
MUC1
EPB41L1
F11
GOLGA6B
PNRC1
RIMBP2
SOAT1
PMEPA1
DCXR
SPHK1
NAXD
TNFSF8
TRPM3
SLC38A9
PPP1R18
NRM
ZNF318
TRIM16L
PBDC1
KCNN2
ADAR
SPIC
CSHL1
SOX5
RFX4
LRRC47
TBC1D23
ITPK1
GSPT2
SASH1
OCSTAMP
AP2B1
PCSK1
TTC39B
LOC102723623
GOLGA6L22
AUH
KLHL4
GPR149
TAGLN3
TMEM266
HHIP
ABCC2
CDC42EP3
FGF4
ERVH48-1
PCDHGB2
PCDHGA5
OR6C3
H3C15
H3C14
H2AC19
H2AC18
GNAI2
EPHB3
PSEN2
LRGUK
NFKB2
CCDC144A
MYF5
CCN2
VSIG10
GIGYF1
TNRC6A
PDGFA
GALNT8
FAM126A
ZC3H12B
TMEM220
ESRP1
ATP6V1G1
SDHC
GOLGA6C
IFITM3
IFITM1
NANOG
GTF2I
NGRN
FAM24B
GAST
RGSL1
MAGEB17
KIF19
LRP5L
CHD7
POU5F1
KLHL5
NRCAM
ZNF532
EEA1
RAPGEF5
MT1E
HOXB1
TNP1
CNPY1
LIPK
POSTN
CACNA2D1
ZNF536
CCDC33
SPRY2
PCDHB5
ZDHHC1
KRBA2
SCGB3A2
SALL3
BFAR
RPSA
SPAG9
ZNF624
EFCAB8
CCDC130
KRT8
ADGRL2
HSBP1L1
RAD54L2
RASSF8
IL22RA2
AADACL3
EPHA4
SLC35E4
GAS1
SPTLC2
SLC2A11
FUBP1
DNAJB4
TMCC1
LIFR
THBS2
RNASE10
CYP1B1
GOLGA6L1
SMAD3
GPC4
ZNF202
JAG1
FZD10
MRGPRX3
PLAGL1
PHC2
NEB
CLEC7A
CDH26
TLL2
SLC24A1
SERINC3
LRRC59
TSPAN14
OLIG3
PRUNE2
FAM189A2
HLCS
CCDC85A
CDC25A
LRRTM4
GTF3C4
DDX31
EZH1
ZNF664-RFLNA
ZNF664
CCDC92
IFIT3
SULT6B1
CEBPZOS
HECW1
CEP135
CDH4
LRRTM3
FZD5
NKX1-2
SELENOT
AQP2
PLIN2
PCGF6
DHDDS
RAP1A
ARHGAP36
TUT4
DNAJB1
COL23A1
ZFYVE1
ANO10
ABHD5
NRG2
VPS37B
GYG1
SOX15
SLC39A8
RPL8
ZNF517
CDH6
MIDEAS
VMO1
GLTPD2
RPRM
DIAPH1
ADA2
LYPD1
MACROH2A1
ZNF90
PCDH1
NUP205
FGFR4
KANK1
MMACHC
CCDC163
COPZ1
SLC35G3
ZCCHC3
INSM1
AHCYL2
NCOA7
CCDC167
SLC35F6
RTL8C
ZBTB2
SERPINB6
ZNF260
UBXN11
CD52
TFAP2C
SH2D4B
MYOM1
SIGLEC11
MINAR1
SPATA4
LPCAT4
FHL1
CCDC172
BEST3
PACSIN2
TIAM2
TACC2
ZSCAN10
RTN4
NEUROG3
DDX39A
GJA10
QSER1
CCND3
TAF8
SUCLA2
RPE65
FOXP1
RND1
OR2S2
CHCHD3
RPS10-NUDT3
RPS10
ARID2
ITPRIP
TPCN2
RAB40AL
RAB1A
PTPN12
ZNF552
PXMP4
RNF43
GLIPR2
PCDHB13
KRT7
PROM1
FAM83F
ETS1
UBAP2
ROR1
JARID2
KRTAP3-1
MTF2
ABL2
ZNF696
ANKRD66
MGAT4C
CLEC9A
NFIX
SLN
PLAAT3
ZNF25
SORT1
ADGRA1
PHF19
NLGN1
RNF213
SCNN1A
LTBR
KLRC1
DHRS7
AIFM1
SLC7A5
GCNT2
SYBU
MSX2
VOPP1
VSNL1
SPP1
KMT2B
ALDH1A2
KLF6
ZSCAN12
SYNDIG1L
PTPRN
GFRA4
GTDC1
ERICH3
LEFTY1
MAP2K5
C19orf25
C10orf120
NEBL
EPB41L4B
MUC3A
H3C13
H2BC18
DACH2
DGLUCY
SLC3A2
SPATA22
SPON1
FAM153B
CALM2
GRAMD2B
OCLN
NCBP2AS2
NCBP2
FRS2
CAVIN3
OLAH
TMEM9B
HMGB1
RBFOX2
MTHFD1
GATA3
CSGALNACT1
TINAGL1
KCNMB2
HYOU1
POLR1F
TOX3
LRFN3
SLCO4C1
HOXA1
MAN2C1
FAM200B
PGPEP1
GRM4
PNISR
TMEM52B
SGMS1
DEFB107B
DEFB107A
TTLL6
AARS2
ABCC10
TBC1D1
SFT2D3
ACACA
TRIM22
TRIM5
HAUS6
CFAP410
ZCCHC4
H3-2
UPRT
PLPP3
EXOC7
GLB1L3
PIGK
MYLK3
SPRY4
PRR15
SPATC1L
IL21
LHFPL5
CLPS
GSE1
SLC35G4
PPP1R21
SMIM11B
SMIM11A
SP9
RIIAD1
DUSP12
ARMC12
MPI
DRD1
PER2
DPH6
ACSL1
CCNT1
SESTD1
PLAC8
EIF4B
MSL2
OR6J1
NANP
GCLC
THOC2
C16orf78
ODF2
MSH6
RAB42
LFNG
GEMIN8
LRRC4C
SEMG1
IL1RAPL1
SDSL
TRIM34
PIN4
SLCO5A1
ZNF469
PPP1R8
SMIM14
TSPAN18
IFRD1
TGIF2-RAB5IF
TGIF2
PAN2
IL23A
TEX46
CHRNA9
RAB3GAP1
GNPTAB
RHCE
DTX2
TRIM38
CNBP
LANCL3
TRIM54
APBA1
GPR160
ERAS
OAZ2
LRIG1
DPYSL3
NMNAT3
FERMT1
DERA
CXCR1
ABT1
PXDC1
GUCA1A
BRINP1
ARAP3
PRR14L
GPC6
KAT8
MCCC1
ERMN
XPOT
TMEM150C
SIX3
DNTT
ABCF3
C1R
KRT6A
PGAP6
FUS
CPN2
SLC24A3
GLRB
RCOR3
USP48
SKA2
PRR11
PRKAA1
DCLRE1C
ARID5A
LRRC74A
RIPOR3
CPNE2
VN1R4
UBE2C
PEA15
IGFBPL1
PADI4
TGM7
IFI16
AKIRIN1
GINS3
KRTAP1-1
KRTAP1-3
DAGLB
EMD
GOT1L1
SLC16A8
ZMAT2
TSPAN5
MID1
KMT5C
RCC2
ANKDD1B
LHCGR
SRRM4
KLF5
CD9
HGC6.3
TTLL7
RNASEL
RGS3
RPUSD3
RTP3
APOBEC1
ZNF649
CNOT11
ASIP
NFYC
ITM2B
SURF6
ARHGEF4
DES
RASAL2
PBX1
IHH
GLI2
SPATA12
JMJD1C
MS4A12
FFAR1
CD4
ARRB2
MRPL17
PELP1
ARHGAP19
SLC22A23
DPPA2
MLLT6
PRSS41
KCNA10
CMTM4
KDELR2
LAPTM5
NF2
EPHA1
HLTF
NCALD
TFE3
CTNNA3
ADCK1
TULP4
NSMAF
TEPSIN
NDUFAF8
ZNF600
ZFP36L1
PLD5
UNC5B
KLF7
RAB23
IGSF1
PRMT2
ARRDC2
ZNF831
LOC105372977
ZBTB3
POLR2G
SHC3
HOXD1
LEMD2
AJAP1
THEM4
TSGA10IP
ZNF747
HES7
ALOXE3
GRK6
SLC2A14
CCDC200
GPSM3
LITAF
JAM3
HCAR2
APOL1
RBM20
CLEC6A
TRIM64B
RTN2
PPM1N
C12orf75
FAM162B
SRC
HMOX1
PGBD5
ATG9B
ABCB8
GRIP1
TNFRSF11A
MSI2
EIF4EBP2
ACP3
ZNF354C
PCDH18
RIMKLB
ATP5F1E
ALPP
ZMIZ2
KDM4A
PLPP2
RNF24
OR10A5
MMP10
CNMD
PCYT1B
RRBP1
HLA-F
TFPI
FGR
CLYBL
OR14I1
WNT5B
ARSD
FGF19
RBMX
SMCHD1
DIRAS3
NHEJ1
CEACAM19
YWHAQ
EGFR
MOV10
NLRP7
JCAD
FCHO2
LLGL1
PRKCA
PNLDC1
TMEM68
TGS1
CCDC171
CTBS
LIMCH1
WBP1L
FOXD1
ZBTB45
CACNB2
ZNF432
COL26A1
CCR8
RNFT1
CORO6
ST3GAL2
TKT
DLX6
CSDE1
POM121