ChIP-Atlas: Target genes

Potential target genes for SOX2

Query protein: SOX2
Distance from TSS: ± 1 kb  ± 5 kb  ± 10 kb
Sort key: SRX8026055 | hESC WIBR3
 
Color legends
  1000 750 500 250 1 0  (Values = Binding scores of MACS2 and STRING)

Download: TSV (text)
Links: Movie and Document for ChIP-Atlas Target Genes
SOX2's Target genes

◢ SOX2: Average

◢ SRX130061: BJ

◢ SRX10407083: Esophageal squamous carcinoma cell line

◢ SRX10407084: Esophageal squamous carcinoma cell line

◢ SRX5286338: ES cells

◢ SRX5286339: ES cells

◢ SRX5286342: ES cells

◢ SRX5286343: ES cells

◢ SRX11904439: H29

◢ SRX11904440: H29

◢ SRX6852812: HCC2814

◢ SRX277137: HCC95

◢ SRX6852810: HCC95

◢ SRX3205373: Head and neck squamous cell carcinoma 

◢ SRX702105: hESC derived mesendodermal cells

◢ SRX702106: hESC derived mesendodermal cells

◢ SRX702108: hESC derived mesendodermal cells

◢ SRX1047416: hESC derived neural cells

◢ SRX11919277: hESC derived neuromesodermal cells

◢ SRX011616: hESC H1

◢ SRX1047413: hESC H9

◢ SRX277140: hESC H9

◢ SRX6101128: hESC H9

◢ SRX6101129: hESC H9

◢ SRX266860: hESC HUES64

◢ SRX266861: hESC HUES64

◢ SRX702107: hESC HUES64

◢ SRX702109: hESC HUES64

◢ SRX20532164: hESC HUES8

◢ SRX20532165: hESC HUES8

◢ SRX5286340: hESC WIBR2

◢ SRX5286341: hESC WIBR2

◢ SRX5286344: hESC WIBR2

◢ SRX10101684: hESC WIBR3

◢ SRX10101685: hESC WIBR3

◢ SRX8026053: hESC WIBR3

◣ SRX8026055: hESC WIBR3

◢ SRX968908: iPSC derived neural cells

◢ SRX968909: iPSC derived neural cells

◢ SRX968910: iPSC derived neural cells

◢ SRX968911: iPSC derived neural cells

◢ SRX968912: iPSC derived neural cells

◢ SRX1813586: iPS cells

◢ SRX1813587: iPS cells

◢ SRX20140858: iPS cells

◢ SRX20140859: iPS cells

◢ SRX512370: iPS cells

◢ SRX6852811: KNS-62

◢ SRX10035162: KYSE-140

◢ SRX10407085: KYSE-70

◢ SRX277131: KYSE-70

◢ SRX6852808: LK-2

◢ SRX6852813: LK-2

◢ SRX6852814: LK-2

◢ SRX026880: LN-229

◢ SRX359955: LoVo

◢ ERX2260038: Lung cancer

◢ ERX2260040: Lung cancer

◢ ERX2260044: Lung cancer

◢ ERX2260046: Lung cancer

◢ SRX2731713: Lung cancer cell line

◢ SRX6750797: MDA-MB-231

◢ SRX6750798: MDA-MB-231

◢ SRX1813580: MRC-5

◢ SRX1813581: MRC-5

◢ SRX1813582: MRC-5

◢ SRX1813583: MRC-5

◢ SRX1813584: MRC-5

◢ SRX1813585: MRC-5

◢ SRX2732210: MRC-5

◢ SRX2732211: MRC-5

◢ SRX5771664: N2102Ep

◢ SRX5771666: N2102Ep

◢ SRX5771668: N2102Ep

◢ SRX11904443: NCI-H1836

◢ SRX11904444: NCI-H1836

◢ SRX6852809: NCI-H520

◢ SRX11904441: NCI-H82

◢ SRX11904442: NCI-H82

◢ SRX10445285: Neural crest cells

◢ SRX10445293: Neural crest cells

◢ SRX10445303: Neural crest cells

◢ SRX10445312: Neural crest cells

◢ SRX20140860: Neural progenitor cells

◢ SRX20140861: Neural progenitor cells

◢ SRX20140862: Neural progenitor cells

◢ SRX20140890: Neural progenitor cells

◢ SRX20140891: Neural progenitor cells

◢ SRX20140892: Neural progenitor cells

◢ SRX5716451: Neural progenitor cells

◢ SRX5716452: Neural progenitor cells

◢ SRX5716453: Neural progenitor cells

◢ SRX330107: ReN-VM

◢ SRX330108: ReN-VM

◢ SRX277134: T.T

◢ SRX3367070: TE-5

◢ SOX2: STRING

CDX2
REST
SOX6
ARHGEF38
NTRK2
DUX4
FRG2C
SMARCA2
TMPRSS11E
SOCS3
RPH3A
NES
MTF2
DPPA5
SACS
ZNF436
GIMAP5
SOX2
FIGNL2
AGO1
FAM227A
CBY1
GOLGA6D
PIPOX
NAV2
TCF7L1
CACHD1
CER1
PPP1R16B
CD99L2
METTL11B
DNMT3B
OBI1
LRRN1
ZNF775
FZD5
CNPY1
SRRM4
EMD
MTM1
LMCD1
FRG2
STRA6
PF4
PPBP
EDDM3B
FGD3
MUC1
AIFM1
DNMBP
TNC
RMND5B
PHC1
SFRP2
MTRNR2L8
FBXW11
FAM222B
CARHSP1
NFE2L3
USP44
ERBB2
PGAP3
LIMCH1
ACSL1
KDM2B
CCDC169-SOHLH2
CCDC169
BCOR
LIN28B
TRIB2
ID1
ZNF483
ITPRIP
SP5
SHCBP1L
MTHFD1L
LEFTY1
LLGL1
SLTM
OR5AR1
COL23A1
CEP41
SHISA5
KLHL4
CLDN9
PLPP2
RNF213
ANKRD1
TRIM24
TGIF2-RAB5IF
TGIF2
ECE1
TTYH1
CLCF1
FAM126A
RAX
SLC7A5
KLF6
BTG2
RARG
HESX1
MRPL20
BFSP1
DHX32
LEFTY2
ZFHX3
ID3
TLL2
GXYLT2
RFX4
ESRP1
FBP1
FRAT2
IER5L
FZD8
PPME1
C2CD3
NFE2
ARHGAP10
RCN1
FGFR2
LRMDA
PRICKLE1
POU5F1
SOX14
SAMD5
MDN1
DUSP6
SGMS2
L1TD1
GAD2
PNCK
SLC6A8
NANOG
FGF2
GPSM3
CYP2S1
TRIML2
PTPN12
SASH1
ROR1
NRG1
NEUROG3
AKIRIN1
FGF1
GSN
NDUFS5
PRDM14
GLIPR2
NRCAM
SLN
SAMHD1
TALDO1
HDAC9
PDE1B
PILRA
PTMA
AHCYL2
ESX1
IFRD1
VENTX
LIPK
FZD2
PES1
TCN2
DDX17
TRAPPC8
KCNJ1
BRINP2
GSPT2
GNAI2
SDCBP
EPHA4
PRKCA
DMTN
WBP1L
MAD2L2
DRAXIN
GCSAM
GADD45G
RGS3
DOK7
MYSM1
FOXD1
NDST1
FAM24B
SMAD3
ZCCHC12
ALPL
RBFOX2
XPNPEP2
SNRPN
WFDC8
SNURF
DENR
USP7
ADA2
MBNL3
WDR36
SELPLG
ERMN
DPPA4
APOBEC3F
BBC3
SET
PLAGL1
LRRTM3
OLFML3
SPATA45
PHF3
USP17L15
DHDDS
AEBP2
ACCS
MFSD4B
ZSWIM3
ACOT8
EEF1A1
PTGS1
ETV4
DPH6
DTX2
PREP
SALL3
SRCIN1
BEND3
ARSD
FZD10
LFNG
ISOC2
PSMG3
GJA1
DCLK1
DLX6
ZNF438
PPP1R18
NRM
FGD4
TACC2
TMEM132B
DAGLB
RHBDD2
MUC3A
NEDD9
TRPM3
FZR1
FAM180A
NADK
DUSP12
WASF1
CDC40
CEP131
TIAM1
LOC150051
SLC4A2
CDK5
GPR149
SLFN12
PKNOX2
MACROH2A1
RTN4
MAP6
NTN1
FAT1
LZTS1
TFAP2A
ARMC12
TIMP4
KDM3A
BFAR
ST18
NECTIN1
PRND
GOLGA6A
AMN1
SALL2
CHFR
UTF1
PDPN
RASGRF2
CD24
MYCL
RSPO1
PMEPA1
ARSL
SYNPO2
PODXL
AFF1
RIF1
USP17L20
USP17L22
PDCL
USP17L21
USP17L18
USP17L12
USP17L11
PSMD9
HPD
ST6GAL1
ANK2
ETV1
ACVR1
PCDH8
MYBPH
SLC2A14
PIN4
HOXD13
HOXD12
TBC1D16
NDUFV1
TMEM43
CHCHD4
WDR49
TSPAN14
IL34
AASDH
BAHCC1
RPRM
MRS2
DGLUCY
LYPD1
TLE1
PIK3R3
PALM2AKAP2
TRIM71
FZD7
CRX
NRARP
NDUFB5
MRPL47
HMGB1
ZSCAN2
MTRNR2L1
GDF11
MED25
FUZ
SMCO1
GRK6
FLAD1
NOTCH1
ARID2
ZNF608
TDGF1
MED12
RIIAD1
ETS1
ZNF398
SCGB3A2
VCAN
DDX43
CELF3
GOLGA6B
ZNF343
NCDN
KIAA0319L
CYP1A1
PHF5A
ACO2
CELF4
FAM120B
HES3
GPRC5B
MTRNR2L2
MSH3
DHFR
KMT2B
ICMT
PARP1
CYTH2
GOLGA6C
IQCH
AAGAB
MCCC1
SOX5
FBXL19
SLA2
CDC42EP3
KIFBP
PER2
TMCC1
FBXO40
TRIM2
FOXP1
HGS
ARL16
TRIP4
RASA1
ZFC3H1
THAP2
SNAPC3
DND1
WNT5B
SLC35A5
ATG3
ZNF532
CRYGB
JPT1
CCT2
LINGO1
SPRY4
SCAF4
APOBEC3D
APOBEC3C
CAPRIN1
TNRC18
PREX2
PRR15
SPIC
ECT2
SYT2
LOC100129484
POSTN
VWCE
UNC13B
CDC14B
TUBB
MDC1
PCBP1
VOPP1
DCAF4L1
AASS
HMOX1
TMC5
ONECUT2
GDF3
ALDH1A2
DDR1
ZNF335
ITGB5
DLL1
TES
KCNN2
LRRTM4
PCLAF
ARIH1
WDFY2
FAM200B
GET3
ZSCAN10
SH3BP4
GABRQ
MAST4
KDM2A
WDHD1
SOCS4
SRSF7
NEBL
STK31
HBG2
TJP2
ZNF781
IFT80
DDX3X
CHN2
MOG
TIAM2
ITGB3
TGIF1
CCDC130
PEAK1
HMG20A
PUF60
ZNF304
SORBS2
SENP2
MMACHC
CCDC163
PYCR2
SYN3
SLC39A8
PGPEP1
DST
PGK1
AK4
CACNA2D1
CAMTA1
SINHCAF
EXT1
C8orf58
GCNT2
ADAR
C1orf127
SLC46A1
PTAR1
PLEKHG1
UNK
TSKS
AP2A1
H3-3B
PNRC1
GTF2I
AKIRIN2
ALDH7A1
TOMM40
LYPD6B
C10orf95
LMNA
OAZ2
PXMP4
SHF
EMSY
UGT1A6
C20orf96
ABCB5
GABRB3
SNX19
UFD1
CDC45
ZCCHC3
TNFSF8
TMEM47
LRIG1
RTBDN
MAST1
CAPN3
PACSIN2
ZNF536
PDIA4
CHD6
ZNF296
GEMIN7
CCN2
PSIP1
ABL2
PSME3IP1
VANGL2
RASAL2
LIN28A
SIX2
KLF3
PITPNM2
TPST2
TCF7L2
SLC20A2
ZNF195
REV3L
ESR2
HES1
TESK2
INSM1
AUH
UBAP2
ZNF875
PRODH
LOC102724788
ZBTB45
OSBPL1A
DIDO1
SLC33A1
HHIP
MARCKS
CCL26
MVB12A
KRT8
GLDC
ZNF600
F11R
NDUFAB1
PRKAG2
SLC25A36
ZNF649
FOXO6
NPSR1
PPP2R3A
MSANTD4
ATP6V1G1
ZNF664-RFLNA
ZNF664
CCDC92
BCL9
RPL8
TRPC4AP
SLC3A2
ZNF565
NTN5
SMIM14
DISP3
SLC23A2
TFE3
MAGEB2
CDH10
DICER1
PGBD5
SUCO
TRPM1
SAPCD2
PXDC1
LIMK2
CNOT11
MUS81
CFL1
CHMP7
VASH2
KLF7
PRRC2B
H3C15
H3C14
H2AC19
H2AC18
LRAT
NUP160
SOAT1
SPHK1
RNASE9
CDYL
TET3
PYGB
ZSCAN9
BIN2
FAM20A
SLC16A13
ABCC10
FAM153B
TNRC6A
OR2T1
EPB41L1
TMUB2
MTHFD1
MMP10
B3GALT5
STOX2
ZNF428
LRRC47
ZBTB18
VPS37B
BORCS6
WDR74
CRISPLD1
CFLAR
CFAP20
PDGFA
LRTM1
DTNA
KLF5
SORT1
TNFRSF6B
BCAT1
INO80D
OGA
CSF2RB
NXPH2
YIPF4
G3BP1
CNGA1
PAK1
KRTAP3-1
ETV6
STMN1
PLPP3
CPT1A
CTNNA1
LRRTM2
KCNIP4
ZNF517
GAST
CCDC85A
S100A16
GSAP
GPC4
DPP3
TRMT2A
RANBP1
RMND1
ARMT1
ADAMTS16
ARHGAP42
ZNF202
SACM1L
PIK3C2A
LRGUK
ACOXL
DACT3
RFLNA
ABCC2
APOBEC3G
UBQLN4
LAMTOR2
DEFB114
DEFB113
ZNF814
F11
HSPH1
POLB
ZMAT2
CXADR
CELSR3
TKT
SYNCRIP
NIPAL1
CTNND2
PIF1
IFI16
DHX8
GLI2
SAXO1
MEX3D
EPHB3
PTPRN
ACSL6
EXOSC9
CD2BP2
DHRS3
ZFP3
HES5
PANK4
TP53
HMGN1
ANAPC15
CSRNP2
YAF2
MRPL18
TOX3
NUAK1
SLAMF1
NWD1
KNTC1
TRDMT1
ADGRL2
PLEKHB1
OSBPL2
SHC3
MBOAT2
HOXB1
SDHC
SH3GL3
SALL4
ESRRA
CATSPERZ
CAAP1
DNAJC7
PSME2
GADD45A
TRIM13
CP
MYEOV
PAFAH2
TIAL1
SLCO5A1
PLCH1
LYPLAL1
MEIS2
ISL2
C22orf39
VEZT
UPF1
FGD6
SPTLC2
MAMDC2
ANKRD6
CD200
ASIP
OR6C3
AJAP1
RABGAP1L
EMC9
TUT1
NKIRAS2
CCDC200
SLC25A11
RNF167
SNAP23
GALNT8
LONRF3
TLX3
RAB30
YLPM1
TMEM107
DDX39A
LEKR1
AIRE
ARID5A
TBC1D23
DPYSL3
TLE3
SDCCAG8
PIMREG
CEP170
ABLIM1
KLHL24
CNMD
CAPZB
IL7R
TSPAN5
ZFYVE1
SPATC1L
CCL2
MSL2
RNF43
CTBP2
RAB23
SRP68
ZNF140
SLC10A2
TPCN2
TCHP
FOXN3
OCSTAMP
ERGIC2
C1QTNF7
SLC25A16
SYBU
NACAD
CHD7
GUCA1A
HELLS
KRBA2
CNR2
ZBTB40
HSBP1L1
RBM20
EXOC7
ITPK1
CTTNBP2NL
ITGB1
NEPRO
JUP
ZFAND3
CCDC33
DUSP29
SFPQ
GABBR1
MIDEAS
PRAC2
PRAC1
TCF4
SNX16
COPZ1
CEP63
ANAPC13
RARB
SPATA22
RAD54B
KIAA1522
LNX1
STK32C
LRRC27
ZNF552
GOLGB1
ZNF627
H4C15
H4C14
AP2B1
PROM1
SMAGP
FAM181A
RAPGEF5
TAGLN3
CHCHD3
ZSWIM4
NCOA7
MATR3
PHLDB2
RRAGA
MEF2C
CCDC88C
ETFB
RAB17
ZDHHC5
LGR6
TP53INP1
ANKRD40
IL17RD
ATG9B
ASH2L
IFIT3
NKX2-2
TMEFF1
RPL27
CACNA1S
YEATS2
SPATA12
EGR3
SCOC
GJA10
ALDH2
TCAF1
LHFPL4
THEM4
ANP32A
EP300
NATD1
ERVH48-1
PCDHB8
CCDC167
LCOR
NARF
ARSG
PCYT1B
KIAA0895L
HEXIM2
CDC25A
TMX2
MED19
NKX1-2
PEA15
PWWP2A
ADRM1
VSIG10
NCBP2AS2
NCBP2
GDF5
ZFAND6
RNF19A
DNAJB1
GABPB2
KRT6B
CUEDC1
RESF1
RBBP9
MTUS1
SEC14L5
ZIC4
ATAT1
PCDHB16
E2F7
POLDIP3
MDK
PLEKHG5
GALNT3
ZBTB8OS
RBBP4
PDE4D
RGPD1
ETV5
CMTM4
C1R
FGF4
SPAG9
ENO1
HNRNPDL
ENOPH1
OAT
IGBP1
FSBP
ARHGAP19
CNP
NSA2
GFM2
HBP1
ZFP64
ZNF318
SUFU
ACTR1A
CCDC88A
GBX2
TSNAXIP1
RANBP10
SKIDA1
JAG1
HLTF
ZBTB2
PRPS1
EPB41L4B
EPB41L2
ABCB8
PAN2
IL23A
UHRF1BP1L
MEX3A
WDR44
NR6A1
TIA1
ZNF37A
MOSPD3
CDC42EP4
HSPA13
ZFP36L1
ZBTB6
FAM107A
NFYC
MANSC1
THRB
NRXN1
HEY2
FGF19
PYGM
TMPRSS9
IPO11
ANKHD1-EIF4EBP3
ANKHD1
CNKSR3
RASSF8
TRIM22
PHC2
TRIM5
CYB5R2
STX16
NKIRAS1
SULT6B1
CEBPZOS
ARF4
AKAP9
PRSS23
TBL1XR1
SPRY2
GATA3
PDE4B
PCDHB5
CNN3
TUBA1C