ChIP-Atlas: Target genes

Potential target genes for RARA

Query protein: RARA
Distance from TSS: ± 1 kb  ± 5 kb  ± 10 kb
Sort key: SRX014752 | NB-4
 
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  1000 750 500 250 1 0  (Values = Binding scores of MACS2 and STRING)

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Links: Movie and Document for ChIP-Atlas Target Genes
RARA's Target genes

◢ RARA: Average

◢ SRX2748853: Adenoid cystic carcinoma

◢ SRX2748855: Adenoid cystic carcinoma

◢ SRX10442515: BE(2)-C

◢ SRX8814860: BE(2)-C

◢ SRX2635935: Hep G2

◢ SRX2635936: Hep G2

◢ SRX3584302: iPSC derived chondrocytes

◢ SRX3584303: iPSC derived chondrocytes

◢ SRX3584304: iPSC derived chondrocytes

◢ SRX3584305: iPSC derived chondrocytes

◢ SRX3584306: iPSC derived chondrocytes

◢ SRX3584307: iPSC derived chondrocytes

◢ SRX3584308: iPSC derived chondrocytes

◢ SRX3584309: iPSC derived chondrocytes

◢ SRX3584310: iPSC derived chondrocytes

◢ SRX3584311: iPSC derived chondrocytes

◢ SRX3584312: iPSC derived chondrocytes

◢ SRX3584313: iPSC derived chondrocytes

◢ SRX6039037: iPSC derived chondrocytes

◢ SRX6039038: iPSC derived chondrocytes

◢ SRX6039039: iPSC derived chondrocytes

◢ SRX6039040: iPSC derived chondrocytes

◢ SRX6039041: iPSC derived chondrocytes

◢ SRX6039042: iPSC derived chondrocytes

◢ SRX3584300: iPS cells

◢ SRX3584301: iPS cells

◢ SRX19662659: Ishikawa

◢ SRX19662660: Ishikawa

◢ SRX4671297: NAMEC8

◢ SRX4671298: NAMEC8

◢ SRX4671299: NAMEC8

◣ SRX014752: NB-4

◢ SRX014770: NB-4

◢ SRX17639399: NB-4

◢ SRX17639400: NB-4

◢ SRX17639401: NB-4

◢ SRX17639402: NB-4

◢ SRX8814876: Neuroblastoma

◢ SRX9607665: NTERA-2

◢ SRX9607666: NTERA-2

◢ SRX1035586: SK-N-SH

◢ SRX1035587: SK-N-SH

◢ SRX1035588: SK-N-SH

◢ SRX1035589: SK-N-SH

◢ SRX4671312: SUM 159PT

◢ SRX4671313: SUM 159PT

◢ SRX4671314: SUM 159PT

◢ SRX19662634: T-47D

◢ SRX19662636: T-47D

◢ SRX682379: TSU-1621MT

◢ SRX014781: UPR9

◢ SRX014782: UPR9

◢ RARA: STRING

SPG7
IER3
FLOT1
SKI
ID1
PLCB2
NADK
NFE2
TBL2
INAVA
PRAM1
LAT2
LAPTM5
NCOA2
HMGCS1
PPCDC
ZNF414
SKIL
NAA10
ARHGAP4
WBP2
UNC13D
MTRNR2L2
MSH3
DHFR
RNPEPL1
DUSP28
ANKMY1
GRAP
LFNG
CD38
GRAPL
LCOR
MYO1F
NFILZ
C5AR2
RNF166
CTU2
STX1A
GFOD1
NIBAN3
CXXC5
CBX4
CCL2
MEF2D
HSH2D
MYRF
DHRS3
AHNAK
MMP17
GRK6
SPATA1
GNG5
RAD23A
CALR
FARSA
MTRNR2L8
TUBA1C
PDCD6IP
MIDN
PCNA
CDS2
CRTC1
ARHGAP45
DLG1
RASGRP2
COL4A2-AS2
SQSTM1
DZIP3
CIP2A
MATN1
TKT
PDE4B
MBD6
DDIT3
CSF3R
SMUG1
MAP2K3
SH3BP2
ITGB2
FGR
INSIG1
COX20
ARID3B
MYO1G
RHBDF2
CSK
HIP1
IDH1
UPF3A
SIRPA
CTSD
ARIH2
RPS6KA1
P2RY2
SPHK2
DBP
TPPP3
KIF21B
DOT1L
GFI1
CENPH
CCDC88B
WDR74
STX5
ZNF718
ZNF595
FMNL1
LRTM2
ZCCHC24
ZC3H12A
BMF
IRF1
HNRNPF
ASB2
NFKBIA
KRI1
CDKN2D
NRL
DCAF11
FDFT1
PKLR
FDPS
RPS9
RASSF4
DEPP1
MKLN1
TRERF1
ZNF775
S100P
NFIC
KAT6B
OLIG1
ZFYVE28
CFAP99
ATP8B4
SSH3
MRAS
ADGRE2
NLRP3
LYL1
ARHGEF2
TOX2
MYBPC3
ICAM1
BAZ1B
CD79A
PRKCD
SULT2B1
RNF157
PITPNM2
DENND4B
RASSF2
MYEOV
C16orf54
SLC25A19
TGM3
ADD1
LIMK1
BBC3
BCL3
RBM15
EXOSC4
GPAA1
SYTL1
RAB11FIP3
DRAP1
C11orf68
C11orf91
CD300A
KAZALD1
ARHGEF18
DNAJB1
MSMO1
SH2B3
KRAS
TCAP
PNMT
PSMD3
PKN1
POC1B-GALNT4
POC1B
GALNT4
EMP3
CCDC114
TMC8
TMC6
KEAP1
LRPAP1
ZNF740
CSAD
SHISAL2A
CD248
SEC14L1
SNX15
CCND3
FADS3
ATG16L2
S1PR2
RARG
TMEM205
RAB3D
CCDC159
HCRT
CTBP2
GHDC
CCDC57
RUNX1
LYST
CEBPE
SRGAP2C
SRGAP2B
TMEM104
NAT9
INAFM2
CYBA
AZU1
PRTN3
BHLHE40
RAB11FIP1
MRPS31
NRG4
EMILIN2
BIN2
ATP23
NUP210L
HUS1
SMARCD2
ARID2
SREBF1
METTL26
MCRIP2
WDR90
CCDC102A
ADGRG5
CEBPA
RNASEH2B
SPDYE12P
NDUFA4
EPM2A
ZSWIM1
SPATA25
NEURL2
CTSA
PIK3AP1
PACC1
NINJ2
TBL1XR1
VSIR
AGTRAP
PDE12
TRIB1
LRMDA
RHOC
GALNT9
HES1
C15orf39
PDE6B
SMIM20
HMGCR
ARL5C
RAC2
ITGA5
CDCA7L
LRP3
NPEPL1
CLEC3B
EVL
DUSP10
SLC47A1
LGALS1
PGAM5
NOL12
TCTEX1D4
PLK3
BTBD19
SLC35D1
PKM
C10orf105
RPS6KB2
PTPRCAP
E2F3
GRK2
CORO1B
H4C12
H4C11
H2BC14
H2AC14
NCR3
LTB
LST1
SLC22A18
NOL4L
ACTL9
P2RX5
PMF1-BGLAP
PMF1
KCNH2
SETD1B
MNT
GSE1
LHX3
FERMT3
RHOF
PELATON
ELANE
CFD
YARS1
S100PBP
UBE2E1
MTRF1L
AP2S1
ARHGAP35
NR2C1
H6PD
IMPDH1
DUX4
TM4SF19
ARRB1
KRT8
AP5B1
PLAU
VENTX
C5AR1
CYP51A1
GYPC
RAP1GAP2
SPDYE13
IGSF10
SPRED2
FASN
CITED4
EVA1B
ALOX5AP
MAMSTR
SPDYE9
SPDYE8
SPDYE15
SPDYE11
FCGRT
ANKRD13D
KCNE3
SEPTIN9
KIAA0513
SH3BP1
ASB1
TNFRSF4
TNFRSF18
MGAT4B
SH2B1
CCDC174
TRIM8
SCUBE1
CHST13
MAP1S
SUPT4H1
MID1IP1
ZNRD2
FAM89B
EHBP1L1
SLC38A10
MYBPH
HSP90AB1
OAZ1
LMLN2
PLIN2
LMTK3
JUP
TRIB3
HIVEP1
RAB37
TANK
EIF1B
SLC9A3R1
SQLE
SOAT2
IGFBP6
GPCPD1
ADGRG3
RBBP5
ANP32E
NCF1
CASTOR1
DUS1L
SMCHD1
B4GALT1
GMEB2
ZNF746
UPP1
USP3
PARP9
DTX3L
PARP15
RAPGEF1
GBE1
MXI1
STN1
MLXIPL
HECTD3
SPDYE17
PECAM1
NFKBID
TYROBP
HCST
FAM131B
ZYX
AEBP1
IFNGR1
ARL4A
CD1D
IGF2BP3
NUFIP2
STRA6
PKN2
ATF3
EXTL1
MTRNR2L1
ZASP
SAP25
WDR43
ADPRHL1
PDP2
H4C14
H3C15
H3C14
H4C15
MAP3K8
PIWIL4
TPRA1
PPP1R27
MCRIP1
PWWP2B
PIKFYVE
ATP6V0D1
AGRP
GPR132
SMG6
ETFBKMT
TAGLN2
RCAN1
SLC12A6
NUTM1
NOP10
MSRB1
C12orf75
IL1RL1
RNF103-CHMP3
RMND5A
PEAK3
ZDHHC19
SLC51A
PLEK
UMODL1
TBC1D10C
PPP1CA
CTTN
LPO
PIK3CD
SLC16A3
LY6E
SLC1A5
NFIL3
DENND2D
TSPAN16
PPP2R5B
ATG2A
GRIFIN
TLR9
SIGIRR
SIPA1
ICAM3
CTDSP1
RAVER1
GPR160
RHBDF1
MPG
CPSF4L
GTF3A
C3orf86
GPR146
TBXA2R
CA11
SCAMP4
ADAT3
ABHD17A
SELPLG
RARB
MINDY2
SEC11A
CDK13
NUP210
SH2B2
ADAP1
TNFRSF10B
NR4A1
TAMALIN
KLF16
ADRM1
PDE8A
PLEKHO2
GMIP
S1PR4
NCLN
ZC3H4
LDLR
DENND6A
GLIPR1L1
CAPS2
SNX33
H4C9
H2BC11
H2AC11
H2BC12
H2AC12
FXYD2
DSCAML1
OPA1
TOP1MT
S100A2
TRAPPC5
MCEMP1
NKIRAS1
NR1D2
F11R
BCAP31
ABCD1
CYB561D1
ATXN7L2
TCF3
RCOR2
BAZ2A
STX10
IER2
UBALD2
LRPPRC
KIF5C
PDCD4
DCTN4
ARID3A
KISS1R
AXDND1
CLIC1
MSH5
MTRNR2L9
DDAH2
PCYT1A
SCD
IQGAP2
ZNF217
CTCF
DGAT2
FOXK1
KIFC3
LOC388282
ATP2A3
EFHD2
TMEM101
FBXO41
EGR4
ACACA
KCNAB2
TXNRD1
CD82
PPARG
TRPV4
TSPAN32
C11orf21
PCNX3
MAP3K11
P2RX1
OSM
WNT1
UBC
GPATCH8
WNT10B
FLNA
SLC17A9
TREM1
TRPM2
KLF9
MVK
SPDYE5
POM121C
PPIAL4C
PPIAL4A
PPIAL4H
CCDC154
NAMPT
KCNIP1
STEAP3
RBKS
BABAM2
PPP1R18
NRM
CIRBP
DHX16
IFT52
KLHL24
SH2D3C
MUC5AC
SLC12A7
CDK9
MYADM
CLTC
MRGBP
NCOA4
PHF19
IFITM3
FGGY
FOS
VASP
KBTBD2
RGPD1
RGPD2
HRH1
CFAP100
CBFA2T3
PARL
NDRG2
ARHGEF40
ZBTB7A
ZDHHC17
AVPR2
ANPEP
ATP13A2
DIO1
PDLIM7
LY6K
CHPT1
MICAL1
IRF2BP1
MTHFR
CLCN6
LZTS2
IRF5
ASIC3
CCDC9
PLEKHO1
TMEM143
SYNGR4
SPDYE16
CCL20
ZNF276
VPS9D1
PRNP
KLHL36
VPS72
PIP5K1A
EIF4A3
GNG4
VOPP1
PLEKHA8
FKBP14
UBE2J1
TRIM11
FAM180B
CRYBG1
BCL2A1
TAC4
TRIM17
C1QTNF4
DUSP7
CALHM3
ZGPAT
ARFRP1
RHOQ
ATP6V1E2
PMPCB
EPN1
TAF1A
ICAM5
ICAM4
PTCD1
CPSF4
MPO
BPI
FCN1
SSBP4
ISYNA1
C16orf74
PTPN6
LONRF3
OGFOD2
ARL6IP4
C12orf57
ABCB9
TBC1D14
ATR
COPS7A
TMEM91
QPRT
HBP1
NEU4
H4C13
H3C11
H2AC16
H1-5
SP1
LINGO1
B3GNTL1
RAB27A
PPIAL4G
MTF2
TEX2
B3GNT5
ANK1
MRI1
C19orf53
B9D1
MFAP4
MAPK7
TYK2
NOG
ZSWIM9
LIG1
GALNT7
ZFP36
PLEKHG2
LPCAT3
NUDT15
TOR4A
ADM
VIPR2
STK35
FSCN1
CCDC9B
RHOH
STK3
AMY2A
TFAP2A
HSPH1
OSR2
OAF
GOLIM4
RHEBL1
KMT2D
CAMP
ZNF584
LIMD2
CRISPLD2
ENG
CPQ
SLC9A5
FHOD1
PPRC1
QRICH1
CPXM1
FRA10AC1
PIP4P2
ITPRIP
PLEKHA2
MRPS15
H3C4
H4C4
NFAM1
FUT1
H2BC6
TNFRSF10A
RASIP1
IZUMO1
KANSL3
FER1L5
SRF
BORCS7
TNFRSF1B
ZNF846
UBE2H
NOTCH3
ATXN1
PTEN
KLLN
CPNE5
TIMP2
MYO18A
PSAP
LYN
SPN
LZTFL1
EPB41L1
MAPK12
MAPK11
DOCK2
ADGRG1
NTSR1
NOTCH2NLC
NOTCH2NLB
NOTCH2NLA
RNF149
DGKZ
ARMC12
FKBP5
IL32
LRRK2
SKIDA1
METTL25
CCDC59
BANP
MLLT10
HAND2
RIOK3
HDAC7
FRAT1
NIT2
EP400
GTF2IRD1
GPR108
MIDEAS
LMNA
TCIRG1
NDUFS8
C3
TTYH3
ALDH2
DYRK1A
EPS15
DHX37
BRI3BP
POLR2E
GPX4
HOXA3
HOXA4
DUSP6
HOXA5
SIRT7
SNUPN
NR4A3
MAFG
CACNA2D4
HSP90AA1
MYC
RELT
ZFAT
PFKFB4
UCN2
CDCA4
UNC13A
PPIAL4F
PPIAL4E
PPIAL4D
ERCC1
NFIA
ZNF76
ZDHHC4
CDKN1A
PTP4A2
NAA38
PLXNB2
TMEM88
CYB5D1
LSG1
TNFSF14
FTL
BAX
ATXN2
AFF1
MARCHF2
SC5D
TXNDC5
CUL2
DRC7
KCNE1
NAA80
HYAL3
IFRD2
DMAP1
KLF10
MIEF1
UCP2
NLRC3
CSPG4
NDUFS7
ING1
CARS2
UBR4
FAM214B
MAP1LC3B2
TMIGD3
ADORA3
RXRA
SRP14
INKA2
NYX
DHX33
FCGR1A
VDR
FCRLB
HAPLN4
H2BC15
H2AC15
LTA4H
APBB1IP
SULT6B1
UHRF2
YWHAQ
PIM3
FBXO6
FBXO44
FBXO2
XCR1
SIGLEC11
GABRR2
BCKDK
GCHFR
SPRING1
RNFT2
ATP11A
C15orf62
ITGAL
UNC45A
HDDC3
PEX5
RDH12
RDH11
PLEKHM1
INTS1
GDPGP1
CIB1
SBF1
ANXA4
INPPL1
FOLR2
RWDD1
CNOT2
NUBP1
SH3BGRL3
MED21
TM7SF3
EVPLL
SREK1IP1
CWC27
GFM2
CHD9
FCGR3A
STING1
TBP
PSMB1
TSPOAP1
OPN1MW3
OPN1MW2
OPN1MW
HSD17B7
POLG
CCNL1
ENO1
CLIC4
TMBIM6
CDC42EP4
AHCYL2
PPIF
TRIM46
KRTCAP2
MFN2
SASH3
DNAJB2
RAB43
DAZAP1
NOTCH1
ZNF254
TP53I11
SIGLEC7
RBPJ
KMT5A
MLEC
BCAT1
PRSS57
ZNF317
SMAD3
SCAP
ARHGAP27
TPD52L2
ABHD16B
LIPM
GRAMD1C
TRIM14
KDM3B
SIK1B
SIK1
ZNF750
PNKD
TNFAIP2
NRROS
ETFB
NKG7
CLDND2
SLC25A15
CYTH3
MAPK8
SLC39A11
ADAM8
SAT1
DYNC1I2
HMGN4
VGLL4
HDGF
FGD3
DNAJB12
B2M
MRPL24
KLF1
GCDH