ChIP-Atlas: Target genes

Potential target genes for RARA

Query protein: RARA
Distance from TSS: ± 1 kb  ± 5 kb  ± 10 kb
Sort key: SRX4671313 | SUM 159PT
 
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  1000 750 500 250 1 0  (Values = Binding scores of MACS2 and STRING)

Download: TSV (text)
Links: Movie and Document for ChIP-Atlas Target Genes
RARA's Target genes

◢ RARA: Average

◢ SRX2748853: Adenoid cystic carcinoma

◢ SRX2748855: Adenoid cystic carcinoma

◢ SRX10442515: BE(2)-C

◢ SRX8814860: BE(2)-C

◢ SRX2635935: Hep G2

◢ SRX2635936: Hep G2

◢ SRX25244558: hESC derived endodermal cells

◢ SRX25244559: hESC derived endodermal cells

◢ SRX25244560: hESC derived endodermal cells

◢ SRX25244561: hESC derived endodermal cells

◢ SRX21236745: IMR-32

◢ SRX21236746: IMR-32

◢ SRX21236747: IMR-32

◢ SRX21236748: IMR-32

◢ SRX3584302: iPSC derived chondrocytes

◢ SRX3584303: iPSC derived chondrocytes

◢ SRX3584304: iPSC derived chondrocytes

◢ SRX3584305: iPSC derived chondrocytes

◢ SRX3584306: iPSC derived chondrocytes

◢ SRX3584307: iPSC derived chondrocytes

◢ SRX3584308: iPSC derived chondrocytes

◢ SRX3584309: iPSC derived chondrocytes

◢ SRX3584310: iPSC derived chondrocytes

◢ SRX3584311: iPSC derived chondrocytes

◢ SRX3584312: iPSC derived chondrocytes

◢ SRX3584313: iPSC derived chondrocytes

◢ SRX6039037: iPSC derived chondrocytes

◢ SRX6039038: iPSC derived chondrocytes

◢ SRX6039039: iPSC derived chondrocytes

◢ SRX6039040: iPSC derived chondrocytes

◢ SRX6039041: iPSC derived chondrocytes

◢ SRX6039042: iPSC derived chondrocytes

◢ SRX3584300: iPS cells

◢ SRX3584301: iPS cells

◢ SRX19662659: Ishikawa

◢ SRX19662660: Ishikawa

◢ SRX4671297: NAMEC8

◢ SRX4671298: NAMEC8

◢ SRX4671299: NAMEC8

◢ SRX014752: NB-4

◢ SRX014770: NB-4

◢ SRX17639399: NB-4

◢ SRX17639400: NB-4

◢ SRX17639401: NB-4

◢ SRX17639402: NB-4

◢ SRX8814876: Neuroblastoma

◢ SRX9607665: NTERA-2

◢ SRX9607666: NTERA-2

◢ SRX1035586: SK-N-SH

◢ SRX1035587: SK-N-SH

◢ SRX1035588: SK-N-SH

◢ SRX1035589: SK-N-SH

◢ SRX4671312: SUM 159PT

◣ SRX4671313: SUM 159PT

◢ SRX4671314: SUM 159PT

◢ SRX19662634: T-47D

◢ SRX19662636: T-47D

◢ SRX682379: TSU-1621MT

◢ SRX014781: UPR9

◢ SRX014782: UPR9

◢ RARA: STRING

SNAPC1
MAMDC2
WDR74
STX5
EAPP
KNL1
MTRNR2L1
DUX4
SHF
PPP6R3
ZBED9
PRMT5
ART1
BRMS1
B4GAT1
VSIR
SACM1L
HMGN4
MTRNR2L2
MSH3
DHFR
NDUFS7
POLR3E
TRIM7
SNX16
BORCS6
PSMB3
PCGF2
H4C8
FBXO31
MAP1LC3B
DPP9
POLG
NPR1
ILF2
HSPA6
SIT1
CCDC107
ARHGEF39
LTA4H
FRG2C
LUC7L2
FMC1-LUC7L2
FMC1
METTL26
WFIKKN1
MCRIP2
GSTA4
C8orf37
IRX2
C5orf38
PSMA3
RAB11A
FCGR3A
ELF1
WBP4
RNASE4
ANG
MPZL1
LOC102724770
DGCR6
H2BC17
H2AC17
OR2B2
TRIM41
TMEM259
CNN2
ID1
SMARCC2
STAT6
FCGR3B
RPS29
BCAR3
PLXDC1
MTRNR2L8
TAF12
TTI2
NEMF
DHRS3
ZNF184
TBL1X
ABLIM3
PXK
CASC3
MDM4
PPEF1
RS1
POLDIP3
FRG2
UBC
MED16
DDIT4
NCOA7
TPCN1
CCDC136
OPN1SW
COL23A1
TMEM242
CSRNP1
MACC1
ZNF827
MUC3A
PDE4DIP
FAM227B
DTWD1
BZW2
ANKMY2
GTF2H2
MYNN
ACTRT3
PHRF1
OSGIN1
RBFOX2
STX16
TIA1
PCYOX1
TMEM107
SELENOH
INTS12
GSTCD
BCL2L1
ZSCAN22
SERPINE1
PRKCE
HES7
ALOXE3
TLR4
GBA
OR1F1
MYC
ZNF839
HMGB1
USPL1
KLRC3
ALOX5AP
YARS1
S100PBP
FIGNL1
FRA10AC1
ZNF219
TMEM253
SIRT4
SYS1
SNAI2
NME1
WNT9A
PLD1
PHLDB2
TMEM248
ATXN2L
H4C14
H3C15
H3C14
H2AC19
H2AC18
H4C15
IARS1
MAP3K20
EPB41
ANP32E
UBE2H
MAT2A
IER3
FLOT1
H4C12
H4C11
H2BC15
H2AC15
STX18
PSCA
FZD2
NFE2L2
ARHGDIA
P4HB
MRPS31
PTPN21
URGCP
IL1R1
EPN1
UBE2D4
CDKN1C
RBBP5
BHLHE40
PTPRE
MRPL40
HIRA
TRIAP1
COX6A1
SETD7
IKBKG
LASP1
MNAT1
RPL37
CARD6
NFIL3
F2RL3
GADD45A
ADAMTS9
ZBTB45
SLC27A5
EIF4A3
GTF2H2C_2
GTF2H2C
DNAJC19
JUNB
SLC44A1
AAR2
RPGR
CCN5
GABARAPL1
ZNF207
C17orf75
TRIB3
CCL20
ANGPTL4
GTF3C3
C2orf66
P3H1
ABT1
KRT6A
NUF2
SLC19A2
USP17L21
USP17L20
USP17L12
USP17L22
ZNF285
KLF7
UCHL5
RO60
PUS1
CARD16
FRMD3
OR2T1
CCND3
MECOM
MOGS
MRPL53
TAF8
NOTCH2NLC
TRIB1
NOTCH2NLB
NOTCH2NLA
WSB2
LRRC59
FAN1
KLF9
ARIH1
ISLR2
METTL15
KIF18A
TAMM41
FIBCD1
PSMF1
ABHD17A
B4GALT1
CPEB3
H1-2
INO80C
LEMD2
RPL26
KRBA2
CCNL1
RANBP2
CCDC80
BTN3A2
CCDC200
H3C4
H4C5
H2BC7
H2AC7
ARID1A
DTNA
MCIDAS
CCNO
HES1
MIDEAS
FAM180B
NDUFS3
KBTBD4
WDR36
RPS7
EIF4G2
ROS1
MKRN3
STUB1
WDR24
JMJD8
PLAT
TMEM167B
CCAR2
C8orf58
EGFR
DDX53
TACO1
FUS
CREB5
ZC3H10
RPL41
VEGFA
SOD2
ATF3
TMEM262
SAR1B
MRPL17
SLC17A3
PTPN6
C12orf57
TIMM44
OR6S1
TOB2
HIF3A
MRPL21
IGHMBP2
FEM1C
BSPRY
WDR31
DEF6
FAM107B
TBC1D16
DPAGT1
H2AX
HMBS
TBC1D19
GRAMD1C
H3C8
H2BC10
COMMD1
PPL
VWA7
LOXL2
TPM2
GPC1
STAT3
PARP16
HAL
FAM43A
ATP1B3
CFLAR
OPA1
ABCG1
OR14K1
OR14A2
MYBPC3
SCHIP1
SCNN1A
LTBR
ARHGEF12
MDGA1
ZNF142
BCS1L
STAU1
NLRX1
FEM1B
H4C2
H3C2
H2AC4
H4C1
H3C1
H1-1
DDX27
TRIOBP
SYCE2
SLCO2A1
BCL3
MFSD11
SRSF2
SEC13
JUN
RPA3
IRF2BP2
FKBP5
SRSF6
MRPL44
BDKRB1
PTPRM
RICTOR
LRRC37A3
COX16
LY6K
RPL22
RNF207
WTAP
PYGB
NOP53
LPIN3
SOAT2
IGFBP6
HPD
PSMD9
POLR2C
CST6
EIF1AD
BANF1
MRPS14
ISLR
ARMC12
SLTM
DDX47
CITED2
TRAF7
RAB26
HNRNPD
ACSL1
EPRS1
SLFN5
PLIN3
INTS6
AQR
ID2
DRAP1
C11orf68
SSNA1
ANAPC2
NUP50
UBE2V1
ADNP
MAP2K2
FAM228B
CSRP1
SF3B6
TP53I3
BTG1
GLIPR1L1
CAPS2
TES
HEG1
THUMPD1
SMAD3
RPRD1A
KDM6B
TNFRSF10B
RIN3
DST
BEND6
PARL
KIF2C
SOD1
DPYSL2
NDUFS4
LRRC2
NUP107
TSHZ2
CDK6
SRRM3
RAB27B
FTH1
H4C4
ATP1A2
GLIS3
H2BC6
BEST1
LIPM
GPR55
PDE4D
PDXK
TNIP1
MAML3
GGA2
PBLD
HNRNPH3
POFUT2
YBEY
MCM3AP
RPL27A
RPL22L1
MTREX
DHX29
FUCA1
CELSR1
SCNN1G
TSPAN4
POLR2L
FANCI
PRR5L
ITIH5
ITGB3BP
EFCAB7
SLC5A1
ZNF705G
TNPO1
MAP4
SUMF2
NECAP2
CFAP45
POLR2H
THPO
CHRD
CTNNA3
CTIF
BNIP3
MTF2
NDRG1
SLC24A1
BCL9L
KRT80
MPHOSPH10
MCEE
CALM2
PCLAF
TRIP4
PAFAH2
CAMK2D
SLC27A4
ADK
DCP1A
PHACTR4
NDUFAF3
IMPDH2
DALRD3
SSRP1
P2RX3
PHC2
CDPF1
SF3A3
ZNHIT6
LIMS4
SLC35A3
RAD54L2
CTNNB1
PEX3
ADAT2
MRPL39
CYB561
IKZF3
NMT2
ACBD4
PLCD3
ZNF460
SERPINB2
CCDC88B
LIMS1
MKNK2
THAP9
SEC31A
KDM2A
DUS2
DPEP2NB
DDX28
TAF10
HES4
TTC4
TPP1
RRP8
ILK
ART4
NPIPB9
TLCD5
CLUAP1
C16orf90
POLR3B
PTPRJ
FAM160B1
RCC2
COPS8
TRAM1
CAMKK2
OSBPL8
SIAH1
B2M
EXOC2
RTN4
NEBL
HSP90AB1
ZSCAN9
SELENOW
FRG1
NUP54
KAZALD1
VAMP2
NAA80
HYAL3
PER1
IFRD2
BCAR1
GYPC
GARS1
HYAL1
GOSR1
IL1A
SPSB1
EEF1AKMT4-ECE2
EEF1AKMT4
ALG3
H2BC14
H2AC14
RPS2
RNF151
S100A2
RPL3L
NDUFB10
UBTD1
MMS19
THSD1
PTPRH
NT5C
GPN3
FAM216A
HPS5
GTF2H1
NUDT9
JRK
IL4I1
NUP62
ATF5
ICMT
HES3
ACYP1
ZC2HC1C
NQO2
PROC
CEP120
ASH1L
R3HDM2
INHBC
UNC45B
NLE1
PPM1A
IGF2BP2
PRKAG2
NR1H3
ACP2
STMN3
RTEL1
USP30
NXT1
ZWILCH
SNAPC5
RPL4
GZF1
DSTYK
MRI1
C19orf53
YPEL2
NDUFA12
ETV1
PPP1R1B
HOXA3
HOXA2
ERCC1
SLC39A13
SLC33A1
SURF6
EREG
AHCY
LPP
CCNC
FBXO4
TMEM190
TRIP11
TMEM238
RPL28
TOMM5
AARSD1
TGIF1
MED23
FBXL5
TRMO
ASNS
FAM126A
HEXIM1
NSUN4
SEC14L1
RAD50
H2BC5
H1-4
MTERF4
TMX4
LSM12
G6PC3
CFAP410
GPAT3
MUC5AC
LSG1
SRSF4
RPTN
CEMP1
ARID5B
SLC25A10
MRPL12
IRF2BPL
ZC3H6
PDPK1
GABARAP
TFPI
PFKFB3
GTF2A1
PHF23
DVL2
USP38
MOK
KANSL3
FER1L5
FOXJ3
DR1
DYNC1H1
CETN3
TEDC1
CRIP1
KRT8
H4C3
H1-6
SLC38A2
CEP112
TM2D1
CRIP2
KLHL20
SPRED2
USP48
R3HCC1
TSPAN16
TOX2
SIK2
TATDN3
NSL1
ABHD10
TAS2R60
TMC1
CCND1
TARS2
EIF3B
CAMK2N1
GPAM
VPS33A
WDR11
FTL
DPY19L4
TBC1D9
MGST1
PDE4A
TBC1D2
UBAC1
MTERF1
TEX46
KDM1A
NMNAT1
LZIC
PAXBP1
MRPL22
GEMIN5
SRSF7
BIRC3
SREK1IP1
CWC27
INA
SLC22A15
EIF2D
HACL1
BTD
MTIF2
MTA2
TUT1
FOXJ2
NUDT16
AXL
STK17B
KPNB1
ZFP36L1
TM4SF1
DCAF10
MRPS16
DNAJC9
ARL14EP
ZNF696
IL1RAP
SRSF1
FUT8
ZMPSTE24
DGUOK
PPA2
EIF3F
RNF121
LOC100133315
CHPT1
SMS
DBNL
TFAM
ANK2
HTR5A
ACSL4
NABP1
ZNF385B
RPS15
NFKBIZ
SLC38A1
PCCB
DCDC1
DNAJC24
POLR2J3
ABHD14B
ABHD14A-ACY1
ABHD14A
C12orf65
PCBP4
ACY1
SUCLG2
ZSCAN30
KLRK1
ARID3B
PPP1R35
LPIN1
METTL25
CCDC59
ZCWPW1
MEPCE
RAG1
SAMSN1
TMSB10
EXOSC6
CLIP4
TRAF6
NAT10
ZXDC
STRA6
CRYBG1
ZNFX1
SSBP2
SNRPD1
SLC7A11
RPL12
LRSAM1
SMG7
DDX1
NDUFC2-KCTD14
NDUFC2
ELF2
RBM28
SCYL3
SCFD1
SNX18
ASPG
MBP
SLC22A5
CXCL8
HMG20B
IFTAP
RAG2
ZG16B
GIPC3
IFI16
MT2A
SLC35F6
COMMD2
MAP3K8
SLC16A7
GIPC1
TSPO
MCAT
SVIL
NFKB1
POU2F3
FGD4
SLC39A1
CRTC2
CREB3L4
C2CD2
SMCO2
C2orf42
CAAP1
FLYWCH1
U2SURP
GABRE
VPS52
RPS18
B3GALT4
SYT5
EIF4EBP1
HEXB
LETMD1
APTX
DNAJA1
TBC1D4
MTSS2
GPATCH1
HUS1
G3BP1
SRP14
SMIM3
NREP
PRDM1
VRK2
SLC1A5
RBCK1
MRPS2
C9orf116
LRRC57
HAUS2
CPNE8
HIP1R
XCR1
SLC25A51
CPE
PARP2
CCNB1IP1
MAP1LC3B2
SPOP
STK40
METAP2
C6orf62
EDC4
RAB18
SH2B1
ARID2
ZNF292
TMEM39A
POGLUT1
CIAO3
OXSM
NGLY1
SOS1
FAT4
RPL32
KMT2E
RTP3
PDE11A
LTF
MRPS35
RBM45
MYEOV
STN1
PKM
CUEDC1
SLC35E2A
SNX17
EIF2B4
ZMYND8
DYM
ALG10
C17orf78
SLC7A4
TMEM235
PIP4P1
ETFDH
C4orf46
FNTA
PNP
SOST
MTMR2
CDC14B
SMARCD3
ETS1
ZNF414
GPR19
TM4SF19
MOB4
PUM2
BRIX1
RAP2B
C18orf21
NOL7
TSSC4
CDK5RAP1
MRRF
FAM184A
RFFL
COX7A2
TARDBP
BLOC1S6
C1orf198
ERRFI1
EIF4H
GATD3B
GATD3A
HDAC7
RWDD2A
PGM3
INTS4
TTC26
PRPF39
C19orf48
CCDC174
MEIS1
DLX2
NUP153
NDUFS5
SPAAR
HRCT1
PMPCA
ENTR1
TOR1AIP2
TOR1AIP1
ADAM12
DLX1
LOC105372440
ACP4
WDR13
TACSTD2
HTRA1
POR
MRPL3
FAM162A
CCDC58
GPBP1
LTN1
C1QTNF1
EMP1
TMEM184A
ZNF221
CHD1L
TEFM