ChIP-Atlas: Target genes

Potential target genes for RARA

Query protein: RARA
Distance from TSS: ± 1 kb  ± 5 kb  ± 10 kb
Sort key: SRX4671298 | NAMEC8
 
Color legends
  1000 750 500 250 1 0  (Values = Binding scores of MACS2 and STRING)

Download: TSV (text)
Links: Movie and Document for ChIP-Atlas Target Genes
RARA's Target genes

◢ RARA: Average

◢ SRX2748853: Adenoid cystic carcinoma

◢ SRX2748855: Adenoid cystic carcinoma

◢ SRX10442515: BE(2)-C

◢ SRX8814860: BE(2)-C

◢ SRX2635935: Hep G2

◢ SRX2635936: Hep G2

◢ SRX25244558: hESC derived endodermal cells

◢ SRX25244559: hESC derived endodermal cells

◢ SRX25244560: hESC derived endodermal cells

◢ SRX25244561: hESC derived endodermal cells

◢ SRX21236745: IMR-32

◢ SRX21236746: IMR-32

◢ SRX21236747: IMR-32

◢ SRX21236748: IMR-32

◢ SRX3584302: iPSC derived chondrocytes

◢ SRX3584303: iPSC derived chondrocytes

◢ SRX3584304: iPSC derived chondrocytes

◢ SRX3584305: iPSC derived chondrocytes

◢ SRX3584306: iPSC derived chondrocytes

◢ SRX3584307: iPSC derived chondrocytes

◢ SRX3584308: iPSC derived chondrocytes

◢ SRX3584309: iPSC derived chondrocytes

◢ SRX3584310: iPSC derived chondrocytes

◢ SRX3584311: iPSC derived chondrocytes

◢ SRX3584312: iPSC derived chondrocytes

◢ SRX3584313: iPSC derived chondrocytes

◢ SRX6039037: iPSC derived chondrocytes

◢ SRX6039038: iPSC derived chondrocytes

◢ SRX6039039: iPSC derived chondrocytes

◢ SRX6039040: iPSC derived chondrocytes

◢ SRX6039041: iPSC derived chondrocytes

◢ SRX6039042: iPSC derived chondrocytes

◢ SRX3584300: iPS cells

◢ SRX3584301: iPS cells

◢ SRX19662659: Ishikawa

◢ SRX19662660: Ishikawa

◢ SRX4671297: NAMEC8

◣ SRX4671298: NAMEC8

◢ SRX4671299: NAMEC8

◢ SRX014752: NB-4

◢ SRX014770: NB-4

◢ SRX17639399: NB-4

◢ SRX17639400: NB-4

◢ SRX17639401: NB-4

◢ SRX17639402: NB-4

◢ SRX8814876: Neuroblastoma

◢ SRX9607665: NTERA-2

◢ SRX9607666: NTERA-2

◢ SRX1035586: SK-N-SH

◢ SRX1035587: SK-N-SH

◢ SRX1035588: SK-N-SH

◢ SRX1035589: SK-N-SH

◢ SRX4671312: SUM 159PT

◢ SRX4671313: SUM 159PT

◢ SRX4671314: SUM 159PT

◢ SRX19662634: T-47D

◢ SRX19662636: T-47D

◢ SRX682379: TSU-1621MT

◢ SRX014781: UPR9

◢ SRX014782: UPR9

◢ RARA: STRING

WDR74
STX5
MAMDC2
DUX4
MTRNR2L1
EAPP
FRG2C
CCDC200
POLDIP3
TMEM242
SHF
ARL4D
ID1
FOLR1
SDC4
TMEM107
STX16
KNL1
AFAP1
TAF12
SNAPC1
ZNFX1
ALLC
PRMT5
STAT6
AVPI1
UBE2V1
EIF4A3
SPAAR
HRCT1
JUNB
FRG2
LOC102724770
DGCR6
MT1E
MT1M
HMGCR
SNX16
YJU2
ANP32E
ART1
SRSF6
BBS1
MTRNR2L8
ADAMTS9
BORCS6
TTI2
MPZL1
FUS
TTC12
PITRM1
C8orf37
PHC2
NDUFAF5
ESF1
RAB13
RPS27
FLYWCH1
PSMB3
PCGF2
H4C14
H3C15
H3C14
H2AC19
H2AC18
SNAI1
CFAP45
SF3A3
LDHA
ITGB2
SIRT4
SLC38A2
UGP2
CASC3
HMGB1
USPL1
BAIAP2
LRFN3
ZSCAN22
EIF4A2
NUDCD1
PPEF1
RS1
CDK5RAP1
ASIP
VPS52
RPS18
B3GALT4
BRMS1
B4GAT1
PARP16
MAT2A
BTG1
OSGIN1
TMEM259
CNN2
GDPD5
MTRNR2L2
MSH3
DHFR
CTNNBL1
CBFA2T2
H4C12
H4C11
H2BC15
H2AC15
MRPL39
DCP1A
DDIT4
TRIB1
FBXW11
UBAC1
SACM1L
MRPS31
POLR3E
FCGR3A
LPIN3
LUC7L
FAM234A
MNAT1
SMG6
HSPA6
STX18
MFSD11
SRSF2
COL23A1
H4C8
MRI1
C19orf53
BZW2
ANKMY2
TRA2B
NDUFS7
CDK13
TSG101
ALDH3A1
ZNF219
TMEM253
H4C15
SRSF5
PLXDC1
HNRNPD
RPS29
LRRC59
TMEM190
TMEM238
RPL28
SLC3A2
WDR36
PTPN1
MTF2
TVP23B
PLK2
CLDN15
FIS1
GTF3C3
C2orf66
PDCD6IP
NFKBIZ
USP45
TSTD3
AAR2
EXOSC6
NCOA5
MYBL2
ABLIM3
RPS6
GSTA4
GMNN
ATOX1
TOB2
FAM180B
MRRF
NDUFS3
KBTBD4
SOST
NPHP1
MTLN
PCLAF
TRIP4
HNF4A
TFIP11
BCAR3
LUC7L2
MT2A
DHX8
FMC1-LUC7L2
FMC1
SRP14
MRPS15
TMEM248
RALGAPB
NCOA7
SYT8
SCAND1
PARK7
PHAX
ALDH7A1
NAGK
AGK
ATP5IF1
NHLRC1
PTPN2
SAMM50
RTF2
MRM3
GLOD4
AARSD1
UBB
TRIM41
H4C3
H1-6
ZMPSTE24
MRPL17
ICE2
MRPL40
HIRA
UCN3
DPP9
MDM4
TATDN1
NDUFB9
DPAGT1
H2AX
HMBS
SLC44A1
TTPAL
PRDX1
CALM2
SRSF7
ATF1
TOMM5
SIT1
CCDC107
ARHGEF39
EBAG9
NUP107
POLR2C
CDKN2AIPNL
NFE2L2
NCOA3
RAB11A
OR2T1
MAK16
RXFP4
KHDC4
RPL37
CARD6
COMMD2
VTA1
NMBR
GPR89A
ZNF518A
G3BP1
ZNF721
PIGG
SLC12A6
DDX19A
NUTM1
NOP10
LRBA
FTL
SAR1B
PRMT2
PAFAH2
SSBP1
SNRPB2
PTPN6
C12orf57
WASHC5
NSMCE2
B2M
FAN1
GOSR1
HMGN4
CCDC174
IFT52
CAAP1
SNX30
HDAC4
NBPF1
KDM8
CLK1
VPS33A
MFAP3
FAM114A2
TRMO
NR1H3
ACP2
EID1
RPS15
DYNC2I1
ZNF326
PIGBOS1
PIGB
TRMT61B
RARS1
FSIP2
NOP53
ZNF335
RABL2B
RABL2A
PSMD1
RWDD1
MAPKAPK5
TAOK3
SUDS3
NME6
NUP85
CACTIN
POLR3F
DZANK1
FAM187A
EFTUD2
CCDC103
NVL
IPO13
DYNC1LI2
POLR2E
GPX4
VDAC2
GOSR2
HSPA9
VTI1B
PSMG2
CEP76
MRPS7
MIF4GD
GGA3
NUP205
HADHB
HADHA
RPL21
REXO1
S1PR4
NCLN
EXOSC5
BCKDHA
C19orf48
TBCK
AIMP1
NNAT
BLCAP
DCTN1
TSNAX
STAM
SLC35B1
ATP5MG
TSN
STAM2
SEC61B
FARSB
PSMD12
LYRM4
FARS2
SRD5A1
NSUN2
PES1
PNO1
PAK1IP1
C6orf52
RBBP5
UPF2
SKP1
NDUFA4
ZNF576
IRGQ
ZNF503
TLE6
COX7A2L
CAPRIN1
SART3
ISCU
ACTR10
RBKS
BABAM2
ZRANB2
DPH6
GOLGA5
TTC8
RPL35A
IQCG
SUPV3L1
VARS1
PI4KB
LMLN
TMED1
RPS23
ATP6AP1L
RPS12
SMC2
MRPS5
ANAPC7
FAM104A
C17orf80
SELENOF
HS2ST1
RABGGTB
PCBP1
USP1
MRPL11
PDAP1
BUD31
HSPA1B
SFI1
EIF4ENIF1
UFM1
ADK
DNAJB7
RPS27A
CLHC1
XPNPEP3
ST13
AP3M1
C6orf47
APOM
ICE1
BAG6
PROSER1
NHLRC3
PIP4P1
COMMD1
OSGEP
APEX1
CCT4
SF3B3
COG4
PAF1
MED29
TM9SF1
IPO4
NEUROG2
TSSK4
NFKBIL1
DDX39B
ATP6V1G2
ZGPAT
ARFRP1
PPP1R1B
LRR1
NEUROG3
PDE6B
HES1
HOXA3
RARB
ZNF608
PIN4
OR6B2
NDUFA10
PTGES2
UBE2I
OAZ3
SUCLG1
ARF1
PDE12
ICMT
HES3
HOXA4
WNT1
HOXA1
DUSP29
SOAT2
IGFBP6
ARHGAP11A-SCG5
ARHGAP11A
TAF9
RAD17
AK6
CDX2
NOTCH2NLC
STK36
RNF25
MRTO4
EMC1
SKIL
MBTPS1
DHRS3
LARP7
RARA
GLRA1
BICRA
SP2
ARID3B
VEZT
FGD6
FZD8
CYP26A1
UNKL
NOTCH2
SPATC1L
SEC11C
RPL7
RDH10
ID2
ARHGAP10
EIF2S3
GADD45GIP1
CDC73
SYBU
C16orf91
NR2F1
PLAGL1
NFE2
G6PC2
PMAIP1
CCDC33
IER3
FLOT1
HOXA2
PALM2AKAP2
PDE4DIP
GORAB
DUSP6
RPN1
MUC20
H2BU1
H2AW
ZNF775
NEUROD1
GTF3C4
DDX31
ZP4
SERINC5
ZSWIM1
SPATA25
NEURL2
CTSA
SH2B1
KCNN4
NEUROG1
ATOH1
RAB11FIP1
CNPY2
IGFBP2
LZTS1
TLE4
KAT6B
BNIP3
TBL2
USP29
ZFHX4
SEC22B
TPM1
ERCC1
TRIM65
GPR108
LEFTY2
ZNF585B
ZNF383
BBS9
BHLHE40
LBX1
TRIP10
CDH18
MRPL38
TLE3
PCGF1
PDHX
APIP
DDAH1
FOXP1
ERRFI1
PHOX2B
SPCS1
GLT8D1
VSIR
AQP6
HOXB1
METTL24
NBAS
RUNX1T1
LBX2
ARHGDIA
ST18
LIN28A
TBX3
HOXA5
INSM1
P4HB
TLE2
ZNF746
ETS1
PPP1R35
MLEC
CDCA7L
ASB2
PCBD2
FAM222A
TEPSIN
NDUFAF8
LPIN1
NBEAL2
CCDC12
ARHGAP24
FGF19
ADAM18
DAPL1
ANKLE2
DNM2
TPRA1
PAH
ARID3C
TBX2
ALKBH5
NHS
CITED2
HOXB3
RHBDD3
EWSR1
S100A10
SLC39A7
RXRB
HSD17B8
ADNP2
DLL4
PPP6R3
HOXC4
CRYAA2
CRYAA
SP1
PRUNE2
FBXO31
URM1
SYTL3
HPD
MINDY2
SP5
CS
FILIP1L
EXOC2
HUS1
MAP1LC3B
TMEM70
ELOC
DCTN3
H2BC17
H2AC17
CCN1
ANKRD28
UNCX
FRA10AC1
COL11A2
RPS10-NUDT3
RPS10
SYNPO
AXDND1
SMAD3
HPCAL1
PDHB
CNTN1
ANK2
NFIA
ZFHX3
KIF21B
PKDCC
CLGN
BAZ2A
ARSG
RPL22
RNF207
FXYD2
XKR7
DLX4
FABP7
NPAS4
E4F1
CAMTA1
RAB5B
PMEL
CDK2
PPFIBP2
ID3
ITGB6
CHN2
STAP2
CRABP2
TLE1
TNFRSF19
ARHGEF28
MRPL34
DDA1
ABHD8
HOXC6
PDE4D
CPVL
DOLPP1
OTUD7B
KDM6B
ASB6
KANSL3
FER1L5
ARRDC4
KDM2B
GPC6
PGK1
TMEM120B
SEPTIN9
DONSON
VIP
UPF3A
DYNLT1
ETAA1
ATP5F1B
FOXP2
MAB21L2
POR
ATF6
FRYL
MSX1
CERCAM
SMPDL3A
POP5
JUP
PDZRN3
SH3BP2
ARHGAP22
NELFA
PRRX1
CADM3
PC
CERK
EXOSC4
KATNB1
RBPJ
RPS24
POLR3A
KCNAB2
BCL3
MRPL20
MYLK4
PANK2
PPCDC
NINJ2
MEIS2
RARG
PTK2B
BMF
IRF2BP2
FAM72C
RHBDD1
SQSTM1
CLCN3
TMEM101
CCNL2
MBNL3
ABHD2
SREBF1
GPCPD1
QPRT
SRSF11
ADAP1
RING1
SMARCD2
GATA4
NOTCH2NLB
NOTCH2NLA
MFSD10
MTMR4
MALRD1
PRKAG2
MIDEAS
ELOVL5
TOP2A
ABCC10
HEXIM2
TMEM9
SLX1B
SLX1A
LFNG
BOLA2B
BOLA2
ZNF687
ZNF718
ZNF595
ZNF367
ZFP36
PLEKHG2
USP17L21
USP17L20
USP17L12
SLC2A9
CNOT2
TRIM46
KRTCAP2
RASSF5
NRL
ATP1A1
NOL4L
USP17L22
FURIN
MUC3A
MRPL3
HNRNPA2B1
CBX3
SPG7
KAT7
RNF34
HSPA1L
HSPA1A
SLC35E3
PCNA
RABGAP1L
EIF1B
CBX5
INHBE
GLI1
ANGPTL4
PSPN
ALKBH7
DACT2
RPL34
TLX2
ECEL1
DLC1
ASXL3
PPP1R18
NRM
SMIM28
RFX1
SOCS3
LRRC40
KAZALD1
ITGAV
C9orf92
ARHGAP30
THOP1
SGTA
NUBP1
HNMT
NFKBIA
RHOQ
ATP6V1E2
TRAF7
EIF2AK3
FAM72D
ZFAND2A
STIP1
GTF3A
NAV3
OSBP
SHC1
GRIK2
STAT1
PRDM10
RNF103-CHMP3
RMND5A
RPS7
ASCL1
DNAH1
IL17RD
ZNF77
SKI
ZNF740
DCAF11
CSAD
TRIM7
ATP1B1
MYBPC3
PSMD6
LRATD2
RAB26
SSBP4
RPLP1
STARD13
TRIM26
CLDN11
HAND1
ARRDC2
CDS2
IQSEC3
GADD45G
SEPTIN4
GPR20
ZC3H3
SOD2
SERPINE1
ME3
ACYP1
PXYLP1
NR2F6
AHDC1
RBBP7
GADD45A
MDM2
GOT1
ECE1
HOXB4
SLC45A4
CCL26
RAB37
KMT5A
LPCAT3
HMGCS1
CAPNS2
AGO1
IKBKB
USP17L5
USP17L30
USP17L29
USP17L28
USP17L27
USP17L26
USP17L25
USP17L24
CAPG
TNFAIP2
SLC34A3
ZNF285
RGS3
CSF3R
DLG2
TCP10L
SPRED2
NLK
EMP3
SMIM20
TRIB3
POLG
TPCN1
ZNF564
CBX4
RGS12
LMOD1
ANKHD1-EIF4EBP3
ANKHD1
STX1A
RTN4
PDP2
LMO4
NCOA2
BAHCC1
TCTEX1D4
PLK3
BTBD19
RAB11B
SOCS2
ADM
SCGB1A1
COL21A1
LIG3
MYRIP
GLRX5
MACROH2A1
EVA1A
SLC35E2B
GRSF1
SH2D6
ZNF827
DSCAML1
CRLS1
MBD6
DDIT3
SLC7A5
ZC2HC1C
RBFOX2
HTR1F
NEK1
TCF7L2
METRN
FAM107B
SYNJ2
MYEOV
KBTBD11
MNT
MSX2
SCHIP1
CORO1A
HOXD3
ELL
TMEM94
BFSP1
MOB3A
IZUMO4
RBM15
PNKD
GMEB2
METTL11B
MIDN
ARHGEF3
IFI16
CNPY3
METTL3
FST
PKN2
CCDC43
KDM3A
ANTKMT
CNKSR3
DAGLB
UBE2F
PLA2G2A
CTSW
EIF3D
WSB2
TMEM212
INAVA
RFX2
UNC5A
LCK
FAM167B