ChIP-Atlas: Target genes

Potential target genes for RARA

Query protein: RARA
Distance from TSS: ± 1 kb  ± 5 kb  ± 10 kb
Sort key: SRX3584311 | iPSC derived chondrocytes
 
Color legends
  1000 750 500 250 1 0  (Values = Binding scores of MACS2 and STRING)

Download: TSV (text)
Links: Movie and Document for ChIP-Atlas Target Genes
RARA's Target genes

◢ RARA: Average

◢ SRX2748853: Adenoid cystic carcinoma

◢ SRX2748855: Adenoid cystic carcinoma

◢ SRX10442515: BE(2)-C

◢ SRX8814860: BE(2)-C

◢ SRX2635935: Hep G2

◢ SRX2635936: Hep G2

◢ SRX25244558: hESC derived endodermal cells

◢ SRX25244559: hESC derived endodermal cells

◢ SRX25244560: hESC derived endodermal cells

◢ SRX25244561: hESC derived endodermal cells

◢ SRX21236745: IMR-32

◢ SRX21236746: IMR-32

◢ SRX21236747: IMR-32

◢ SRX21236748: IMR-32

◢ SRX3584302: iPSC derived chondrocytes

◢ SRX3584303: iPSC derived chondrocytes

◢ SRX3584304: iPSC derived chondrocytes

◢ SRX3584305: iPSC derived chondrocytes

◢ SRX3584306: iPSC derived chondrocytes

◢ SRX3584307: iPSC derived chondrocytes

◢ SRX3584308: iPSC derived chondrocytes

◢ SRX3584309: iPSC derived chondrocytes

◢ SRX3584310: iPSC derived chondrocytes

◣ SRX3584311: iPSC derived chondrocytes

◢ SRX3584312: iPSC derived chondrocytes

◢ SRX3584313: iPSC derived chondrocytes

◢ SRX6039037: iPSC derived chondrocytes

◢ SRX6039038: iPSC derived chondrocytes

◢ SRX6039039: iPSC derived chondrocytes

◢ SRX6039040: iPSC derived chondrocytes

◢ SRX6039041: iPSC derived chondrocytes

◢ SRX6039042: iPSC derived chondrocytes

◢ SRX3584300: iPS cells

◢ SRX3584301: iPS cells

◢ SRX19662659: Ishikawa

◢ SRX19662660: Ishikawa

◢ SRX4671297: NAMEC8

◢ SRX4671298: NAMEC8

◢ SRX4671299: NAMEC8

◢ SRX014752: NB-4

◢ SRX014770: NB-4

◢ SRX17639399: NB-4

◢ SRX17639400: NB-4

◢ SRX17639401: NB-4

◢ SRX17639402: NB-4

◢ SRX8814876: Neuroblastoma

◢ SRX9607665: NTERA-2

◢ SRX9607666: NTERA-2

◢ SRX1035586: SK-N-SH

◢ SRX1035587: SK-N-SH

◢ SRX1035588: SK-N-SH

◢ SRX1035589: SK-N-SH

◢ SRX4671312: SUM 159PT

◢ SRX4671313: SUM 159PT

◢ SRX4671314: SUM 159PT

◢ SRX19662634: T-47D

◢ SRX19662636: T-47D

◢ SRX682379: TSU-1621MT

◢ SRX014781: UPR9

◢ SRX014782: UPR9

◢ RARA: STRING

LOC102724770
DGCR6
ZNF335
RABL2B
RABL2A
DUX4
POLR3F
DZANK1
PSMD1
RWDD1
IPO13
RPL21
MAPKAPK5
NUP85
DYNC1LI2
NME6
VTI1B
TLE6
FAM187A
EFTUD2
CCDC103
FRG2C
TAOK3
SUDS3
VDAC2
HSPA9
CACTIN
NVL
NUP205
PSMG2
CEP76
REXO1
SRD5A1
NSUN2
TBCK
AIMP1
C19orf48
MRPS7
MIF4GD
GGA3
LYRM4
FARS2
HADHB
HADHA
STAM
TSNAX
ATP5MG
POLR2E
GPX4
EXOSC5
BCKDHA
SLC35B1
GOSR2
UPF2
S1PR4
NCLN
SART3
ISCU
DCTN1
FARSB
NNAT
BLCAP
PES1
ZNF503
STAM2
HOXA3
HOXA4
GOLGA5
PPP1R1B
ZNF576
IRGQ
NDUFA4
PNO1
SEC61B
DPH6
SKP1
TSN
USP1
RPS23
ATP6AP1L
PSMD12
ACTR10
TTC8
SMC2
ZRANB2
RBBP5
SFI1
EIF4ENIF1
TMED1
PAK1IP1
C6orf52
ARF1
UFM1
SUPV3L1
RABGGTB
COX7A2L
NFKBIL1
DDX39B
ATP6V1G2
CAPRIN1
FRG2
DNAJB7
XPNPEP3
ST13
PI4KB
PIP4P1
OSGEP
APEX1
RPL35A
IQCG
LMLN
MRPL11
PCBP1
C6orf47
APOM
BAG6
ICE1
ANAPC7
MRPS5
RBKS
BABAM2
VARS1
RPS12
FAM104A
C17orf80
SF3B3
COG4
PDAP1
BUD31
ZFHX4
NEUROG1
POU2F2
HES1
WNT1
SELENOF
HS2ST1
ADK
AP3M1
PROSER1
NHLRC3
SEC22B
GRIK2
ABCG2
RPS27A
CLHC1
SEC11C
NEUROG2
ICMT
HES3
UBE2I
RND3
FGF19
LRATD2
RPS29
LRR1
NOTCH2NLC
NOTCH2
UNKL
C16orf91
BICRA
PAF1
MED29
FZD8
G6PC2
RPL7
RDH10
OR6B2
NDUFA10
NFIA
PDE6B
ARHGAP11A-SCG5
ARHGAP11A
MRTO4
EMC1
HSPA1B
TM9SF1
IPO4
TSSK4
TAF9
RAD17
AK6
MSX1
DMRT3
SERINC5
RAB11FIP1
STK36
RNF25
NEUROD1
COMMD1
CCT4
MUC20
TMEM120B
ARL4D
CDPF1
HOXA5
GNG12
PIN4
TMEM143
SYNGR4
ANK2
FXYD2
FABP7
SMPDL3A
DSCAML1
PTGES2
BRINP1
PLAGL1
RHBDD3
EWSR1
TLE1
LBX1
HOXB3
HOXB4
ITGB6
KCNN4
PRDM13
PAX3
SUCLG1
FGD3
SOGA3
KMT2A
SYNPO
HOXC6
HOXC5
CNPY2
PARP11
NCOR2
TMEM70
ELOC
LAMA4
ZGPAT
ARFRP1
CCDC200
EIF2S3
MEIS2
HSPA6
ANKLE2
SLA
CLDN11
RTL8B
GTF3C4
DDX31
SPTBN1
SH3BP5
PDE1A
ZNF608
ARHGAP24
USP17L21
USP17L20
USP17L12
USP17L22
SPRR1A
TMEM72
PDE12
ETS1
SEMA4D
CYP26A1
PIPOX
HMX2
BUB3
C5orf63
PRM3
PRM1
TNP2
PDHB
ALKBH5
FBXL18
ACTB
CABP7
SMURF1
OAZ3
FRMD4A
TMEM107
BNIP3
PDHX
APIP
COL17A1
PALM2AKAP2
CHODL
PCBD2
EVX2
LRRC10
LIMK2
PDE1B
ERRFI1
NR2F1
GSX2
GDF10
TLE4
PDE4DIP
KCNK16
POP5
NFIB
GFRA1
SKIL
LARP7
CS
ARID3C
DCTN3
MRPL3
C1orf105
GADD45GIP1
GALNT14
KBTBD8
BBS9
HOXD3
DTX4
RBM39
ACSS3
TPO
RBBP7
CPA1
VEZT
FGD6
FOXB2
RPL34
FOXP2
DDAH1
CCN1
USP17L13
USP17L11
USP17L18
USP17L10
SMIM28
SNCG
MMRN2
CERCAM
GALNTL6
TMEM275
MYRF
LZTS1
MEF2C
GORAB
MYADM
KITLG
PKHD1
PGLYRP1
IGFL4
BECN2
TRABD2B
FAM118A
GLRA1
AGMO
EAPP
ASB6
C10orf90
PDZRN3
DLG2
ID2
LAMB4
MAMDC2
MTRNR2L1
WDR74
STX5
NEUROG3
RARB
MTRNR2L2
MSH3
DHFR
HOXA1
ID1
DUSP29
SOAT2
IGFBP6
CDX2
MBTPS1
DHRS3
MTRNR2L8
RARA
SP2
ARID3B
SNAPC1
SPATC1L
ARHGAP10
CDC73
SYBU
NFE2
PMAIP1
CCDC33
IER3
FLOT1
HOXA2
CBFA2T2
DUSP6
RPN1
H2BU1
H2AW
ZNF775
NDUFS7
ZP4
ZSWIM1
SPATA25
NEURL2
CTSA
SH2B1
ATOH1
DPP9
IGFBP2
KAT6B
TBL2
USP29
TPM1
ERCC1
TRIM65
GPR108
LEFTY2
ZNF585B
ZNF383
BHLHE40
TRIP10
CDH18
MRPL38
TLE3
PCGF1
FOXP1
PHOX2B
SPCS1
GLT8D1
VSIR
AQP6
HOXB1
METTL24
NBAS
TTI2
RUNX1T1
LBX2
ARHGDIA
ST18
LIN28A
TBX3
INSM1
P4HB
TLE2
ZNF746
PHC2
PPP1R35
MLEC
CDCA7L
ASB2
FAM222A
TEPSIN
NDUFAF8
LPIN1
NBEAL2
CCDC12
ADAM18
DAPL1
DNM2
TPRA1
PAH
TBX2
COL23A1
NCOA7
NHS
TAF12
CITED2
S100A10
SLC39A7
RXRB
HSD17B8
ADNP2
DLL4
PPP6R3
HOXC4
CRYAA2
CRYAA
SP1
PRUNE2
FBXO31
URM1
SYTL3
HPD
MINDY2
SP5
FILIP1L
EXOC2
HUS1
MAP1LC3B
H2BC17
H2AC17
ANKRD28
UNCX
FRA10AC1
COL11A2
RPS10-NUDT3
RPS10
AXDND1
SMAD3
HPCAL1
CNTN1
ZFHX3
KIF21B
PKDCC
CLGN
BAZ2A
ARSG
RPL22
RNF207
XKR7
DLX4
STX18
NPAS4
E4F1
CAMTA1
RAB5B
PMEL
CDK2
PPFIBP2
ID3
CHN2
STAP2
CRABP2
TNFRSF19
ARHGEF28
TMEM242
MRPL34
DDA1
ABHD8
PDE4D
CPVL
DOLPP1
OTUD7B
KDM6B
BAIAP2
KANSL3
FER1L5
ARRDC4
KDM2B
GPC6
PGK1
SEPTIN9
DONSON
ABLIM3
VIP
UPF3A
DYNLT1
ETAA1
ATP5F1B
MAB21L2
POR
ATF6
FRYL
JUP
SH3BP2
ARHGAP22
NELFA
PRRX1
CADM3
PC
CERK
EXOSC4
KATNB1
RBPJ
RPS24
POLR3A
KCNAB2
BCL3
MRPL20
MYLK4
PANK2
PPCDC
TRIB1
NINJ2
RARG
PTK2B
BMF
CCDC174
IRF2BP2
FAM72C
RHBDD1
SNX16
SQSTM1
CLCN3
TMEM101
CCNL2
MBNL3
ABHD2
SREBF1
GPCPD1
QPRT
SRSF11
ADAP1
RING1
SMARCD2
GATA4
SIRT4
NOTCH2NLB
NOTCH2NLA
MFSD10
MTMR4
MALRD1
PRKAG2
MIDEAS
ELOVL5
TOP2A
ABCC10
HEXIM2
TMEM9
SLX1B
SLX1A
LFNG
BOLA2B
BOLA2
ZNF687
SMG6
ZNF718
ZNF595
NBPF1
ZNF367
ZFP36
PLEKHG2
SACM1L
PSMB3
PCGF2
SLC2A9
CNOT2
TRIM46
KRTCAP2
RASSF5
NRL
ATP1A1
NOL4L
CALM2
FURIN
MUC3A
HNRNPA2B1
CBX3
SPG7
KAT7
RNF34
HSPA1L
HSPA1A
SLC35E3
PCNA
RABGAP1L
MRPS31
EIF1B
CBX5
INHBE
GLI1
ANGPTL4
PSPN
ALKBH7
DACT2
TLX2
ECEL1
DLC1
ASXL3
PPP1R18
NRM
RFX1
SOCS3
LRRC40
KAZALD1
ITGAV
C9orf92
ARHGAP30
THOP1
SGTA
POLDIP3
NUBP1
HNMT
NFKBIA
RHOQ
ATP6V1E2
TRAF7
EIF2AK3
FAM72D
ZFAND2A
STIP1
GTF3A
NAV3
OSBP
SHC1
STAT1
PRDM10
RNF103-CHMP3
RMND5A
RPS7
ASCL1
DNAH1
IL17RD
ZNF77
SKI
ZNF740
DCAF11
CSAD
SHF
TRIM7
ATP1B1
MYBPC3
PSMD6
RAB26
SSBP4
RPLP1
STARD13
TRIM26
HAND1
KNL1
ARRDC2
CDS2
IQSEC3
GADD45G
SEPTIN4
GPR20
ZC3H3
SOD2
TRIM41
SERPINE1
ME3
ACYP1
PXYLP1
NR2F6
AHDC1
BRMS1
GADD45A
MDM2
GOT1
ECE1
SLC45A4
CCL26
RAB37
KMT5A
BORCS6
LPCAT3
HMGCS1
CAPNS2
AGO1
IKBKB
USP17L5
USP17L30
USP17L29
USP17L28
USP17L27
USP17L26
USP17L25
USP17L24
CAPG
KDM8
TNFAIP2
SLC34A3
ZNF285
RGS3
CSF3R
TCP10L
SPRED2
NLK
EMP3
SMIM20
TRIB3
POLG
TPCN1
ZNF564
CBX4
RGS12
LMOD1
ANKHD1-EIF4EBP3
ANKHD1
STX1A
RTN4
FTL
PDP2
LMO4
NCOA2
BAHCC1
ART1
TCTEX1D4
PLK3
BTBD19
RAB11B
G3BP1
SOCS2
ADM
SCGB1A1
COL21A1
B4GAT1
LIG3
MYRIP
GLRX5
MACROH2A1
EVA1A
SLC35E2B
GRSF1
SH2D6
ZNF827
CRLS1
MBD6
DDIT3
SLC7A5
ZC2HC1C
RBFOX2
HTR1F
NEK1
TCF7L2
METRN
FAM107B
HNRNPD
SYNJ2
MYEOV
KBTBD11
MNT
MSX2
SCHIP1
CORO1A
ELL
TMEM94
BFSP1
MOB3A
IZUMO4
RBM15
NHLRC1
PNKD
GMEB2
METTL11B
MIDN
ARHGEF3
IFI16
JUNB
CNPY3
METTL3
MTF2
FST
PKN2
SIT1
CCDC43
PRMT5
KDM3A
ANTKMT
CNKSR3
DAGLB
UBE2F
PLA2G2A
CTSW
EIF3D
WSB2
TMEM212
INAVA
RFX2
UNC5A
LCK
FAM167B
NKD1
ARID5A
NEK3
CPSF4L
ETF1
CSNK1D
MPND
SORL1
MRS2
SHB
KIF5C
BCAR3
SLC25A25
SLC6A12
CLDN9
PYGL
IGFBP7
TESC
SLC19A1
NCDN
KIAA0319L
KIAA1549
MRPS28
FGR
UBC
PPFIBP1
NKX1-1
TXNRD1
SCARB1
ZBTB18
SH3BP1
INKA2
CMSS1
ARID2
LRRC45
CENPX
NAGLU
TACC1
SLC30A4
LINGO1
PLEC
TUBA1C
KLF16
CYP51A1
ARAP1
PCM1
MMD
ATP6V1G3
ABCA4
TLN1
CREB3
HNRNPL
H3C12
COX5A
SH3YL1
ACP1
METTL26
SORBS2
SPOCK2
PGP
ARID4A
RNPEPL1
DUSP28
ANKMY1
H4C14
H3C15
H3C14
LOC102724265
SEC14L1
NCS1
DMD
MYO1B
LNPEP
FRMD3
UGP2
FOXA3
SCNN1A
LTBR
CCDC107
ARHGEF39
NRXN1
NR1D1
EIF4H
RNF149
HMGB1
ITGB2
CAND1
LIMA1
RPS6KA1
UACA
NAA10
ARHGAP4
TRIM2
KIF3B
NAV2
CSRNP1
STIL
TRDMT1
EVI5L
RNF144A
BOLA2-SMG1P6
ANKRD39
KIAA0319
IL23R
STX16
PHB
CPT1A
ALOX5AP
PRR14
FBRS
DMBX1
ARHGEF10L
OTX1
NRCAM
INAFM2
FRAT2
HNRNPAB
RIMKLB
METTL25
CREB5
CCDC59
RGS5
TCHP
LMNA
SMIM11B
SMIM11A
SMUG1
MRPS24
NPR1
ILF2
RXRA
RNF166
GATD3B
GATD3A
CTU2
TEDC1
CEP41
DNAJB3
ETFBKMT
BAX
LAPTM5
CIC
CCDC38
AMDHD1
PRKACA
TDRKH
HTR5A
MBD2
TDG
DIABLO
C12orf73
TMCO6
NEDD9
ZBTB45
PSMB5
PCTP
GATA6
CACNA1D
DRD4