ChIP-Atlas: Target genes

Potential target genes for RARA

Query protein: RARA
Distance from TSS: ± 1 kb  ± 5 kb  ± 10 kb
Sort key: SRX682379 | TSU-1621MT
 
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  1000 750 500 250 1 0  (Values = Binding scores of MACS2 and STRING)

Download: TSV (text)
Links: Movie and Document for ChIP-Atlas Target Genes
RARA's Target genes

◢ RARA: Average

◢ SRX2748853: Adenoid cystic carcinoma

◢ SRX2748855: Adenoid cystic carcinoma

◢ SRX10442515: BE(2)-C

◢ SRX8814860: BE(2)-C

◢ SRX2635935: Hep G2

◢ SRX2635936: Hep G2

◢ SRX3584302: iPSC derived chondrocytes

◢ SRX3584303: iPSC derived chondrocytes

◢ SRX3584304: iPSC derived chondrocytes

◢ SRX3584305: iPSC derived chondrocytes

◢ SRX3584306: iPSC derived chondrocytes

◢ SRX3584307: iPSC derived chondrocytes

◢ SRX3584308: iPSC derived chondrocytes

◢ SRX3584309: iPSC derived chondrocytes

◢ SRX3584310: iPSC derived chondrocytes

◢ SRX3584311: iPSC derived chondrocytes

◢ SRX3584312: iPSC derived chondrocytes

◢ SRX3584313: iPSC derived chondrocytes

◢ SRX6039037: iPSC derived chondrocytes

◢ SRX6039038: iPSC derived chondrocytes

◢ SRX6039039: iPSC derived chondrocytes

◢ SRX6039040: iPSC derived chondrocytes

◢ SRX6039041: iPSC derived chondrocytes

◢ SRX6039042: iPSC derived chondrocytes

◢ SRX3584300: iPS cells

◢ SRX3584301: iPS cells

◢ SRX19662659: Ishikawa

◢ SRX19662660: Ishikawa

◢ SRX4671297: NAMEC8

◢ SRX4671298: NAMEC8

◢ SRX4671299: NAMEC8

◢ SRX014752: NB-4

◢ SRX014770: NB-4

◢ SRX17639399: NB-4

◢ SRX17639400: NB-4

◢ SRX17639401: NB-4

◢ SRX17639402: NB-4

◢ SRX8814876: Neuroblastoma

◢ SRX9607665: NTERA-2

◢ SRX9607666: NTERA-2

◢ SRX1035586: SK-N-SH

◢ SRX1035587: SK-N-SH

◢ SRX1035588: SK-N-SH

◢ SRX1035589: SK-N-SH

◢ SRX4671312: SUM 159PT

◢ SRX4671313: SUM 159PT

◢ SRX4671314: SUM 159PT

◢ SRX19662634: T-47D

◢ SRX19662636: T-47D

◣ SRX682379: TSU-1621MT

◢ SRX014781: UPR9

◢ SRX014782: UPR9

◢ RARA: STRING

ARSG
INAFM2
CMTM7
SH3BP1
PARK7
CCDC88A
ARID5A
DIAPH1
GRHL3
USP15
LYL1
CCPG1
C15orf65
NRROS
POR
SLCO4C1
IQCH
AAGAB
ARID3B
SPATC1L
RASSF2
C11orf24
SASH3
MRPL34
DDA1
ABHD8
PPIB
NDUFA4
MTMR4
SEPTIN4
TRAF4
NOTCH2NLC
NOTCH2NLB
NOTCH2NLA
TBC1D10C
PPP1CA
CARNS1
NDFIP2
DISP2
BIN2
SLC9A1
WNT1
WNT10B
PLEKHO2
KAZALD1
CYCS
ZCCHC3
C20orf96
FGR
SKIV2L
NELFE
ADCY7
KCTD6
MYBPC3
KMT2E
ID3
TRIM65
MRPL38
NR1D1
RNF149
LNPEP
NOTUM
NBEAL2
CCDC12
NBPF1
NAA80
HYAL3
IFRD2
KCNAB2
TMEM222
SRPRA
SH3BP2
RASSF5
SNX3
HEBP2
TRMT6
MCM8
MRPS24
DYNLL1
MAP2K1
FAM110A
TBRG4
FAF2
MTCH1
JAK3
THRAP3
SNAPC3
AHDC1
EMP3
CCDC114
SSX2IP
CDCA7L
CYP2E1
LUZP1
ZNF76
SLC39A13
SLC35E2B
ATP23
RWDD2A
PGM3
GPR108
TRIP10
DUSP6
NOTCH2
TRERF1
DGAT2
POLR2J3
PEX3
ADAT2
VAV1
SH2D3A
PRKDC
MCM4
SLC35E2A
PIP4P2
CTTN
C1orf159
ATAD3B
KCNH2
KMT2A
ATG16L2
PRDM1
ZDHHC4
PRDM10
BUD13
ZNF25
TIGD5
EEF1D
VPS37C
RFESD
RER1
MORN1
SH3TC1
STAT1
NCBP2AS2
NCBP2
USP21
PPOX
UFC1
YBX2
RAD50
ASNS
ATAD3A
CNOT6
CPT1A
RPS6KA1
KIF1C
INCA1
CAMTA2
FAM227B
DTWD1
DENND2D
DPP9
TDP2
ACOT13
YY1AP1
DAP3
HPF1
STAP2
CD164
RNF125
PLEC
RNF139
UBE2L3
RIMBP3C
RIMBP3B
IL21R
MAPKBP1
ELANE
CFD
PKM
UBL7
MYCBP2
MRTO4
EMC1
AKIRIN1
PTDSS1
MTERF3
MTMR1
PDP2
KBTBD11
C21orf91
RNF103-CHMP3
RMND5A
LANCL2
RITA1
DDX54
IQCE
DISP3
ASH1L
HMGCL
MAGEF1
CDK5R1
GTF2H3
EIF2B1
CBWD5
CBWD3
SBF1
DLX2
RXRA
RPL17-C18orf32
RPL17
C18orf32
UBIAD1
MAPK6
TMEM250
RASA4
FNTA
DDX23
CEP135
ZFAND2A
SBNO2
CARMIL1
NOC4L
DDX51
IL6R
GSPT1
TAS1R1
NOL9
ARF3
CLIC4
BRAP
ACAD10
RPS3
FKBP1A
C12orf65
ZNF517
ZNF34
RPL8
CHST11
SEC14L1
ZNF219
TMEM253
TSPAN4
POLR2L
INTS1
CD151
NMNAT1
LZIC
IQGAP2
TMEM65
TKFC
DDB1
PCMT1
RIMBP3
MAPKAPK3
CISH
CDKN2C
MEF2D
FAF1
SUPT4H1
PTP4A3
SEBOX
TMEM199
POLDIP2
FCHSD2
LYPLA2
GALE
DYNC2H1
PPIL4
MRPL20
CCNL2
ZNF318
PDE4D
C6orf89
HYLS1
ZWILCH
SNAPC5
RPL4
RASA4B
PDXK
PPP4R3B
SMAD3
RCC2
LOC102724265
NOXO1
RPS2
RNF151
TBL3
PRKAB1
RAC2
NUS1
BCL3
RBSN
ZBTB17
CLTC
PSMF1
ARF4
SFN
RNF216
FOS
CTSC
TMEM41A
TRAM1
HDAC7
FLT3LG
MT2A
MAPKAPK5
USP42
CLN5
SPTBN5
RGS14
LMAN2
NDUFV1
CMTR1
BOD1L1
PPP1R8
C2
ZBTB12
EHMT2
PPP1R1B
STARD3
GARS1
ZNF774
PRR19
PAFAH1B3
SMIM41
ATG101
PRKAG1
CDC42
FXYD2
WDR53
FBXO45
ABCF1
MYO1G
IQSEC1
DTX2
ARHGAP27
IDS
LSM5
AVL9
RCN2
SEC13
HMGB1
USPL1
MT1H
MT1G
DHDDS
ADPGK
SDE2
CHP1
EXD1
FAM120B
B3GALNT2
RERE
NFKBIA
CBFA2T3
TRNAU1AP
RFC2
TESMIN
RNF19A
TAF12
THYN1
ACAD8
PYCR3
GFUS
DPEP1
TPP2
TSPAN16
KCNC3
ZZZ3
MCU
PHF13
RNF34
ZC3H6
ABHD12
HBS1L
FBXL18
EIF3B
DLST
RPLP1
TMEM262
ZFPL1
CDCA5
HUS1
EHD1
PCNA
EIF1B
TMEM230
CDS2
DHRS4L2
DCP1A
TAF15
RWDD1
SNAP29
PI4KA
TRIAP1
COX6A1
SLC35A1
MESD
GTF2H2C
GTF2H2C_2
RANBP3
ZCCHC4
TUBB3
MC1R
ERMARD
C15orf40
VPS36
CKAP2
PSMD12
H3-3B
UNK
PEAK3
PIK3AP1
CCNL1
GZF1
SOAT2
IGFBP6
HTRA2
DQX1
TNPO1
FANCE
POLR2J
YTHDF2
SPRY2
ATG5
POLG
ZNF202
REXO1
PSTPIP1
CBWD6
FAM76B
CEP57
CRLS1
VPS37A
CNOT7
F2RL3
LAMP1
UGGT2
PPP1R18
NRM
SDF4
B3GALT6
MARCHF7
EEF2
RPS6KB2
PTPRCAP
TCF12
RB1
NCKAP5L
PTP4A2
ETFA
ADAM17
PGK1
CHAMP1
DCSTAMP
UBOX5
FASTKD5
RGS16
SMIM14
DBI
C2orf76
PGD
SIRT6
RPS28
NDUFA7
ANKRD24
SCAF1
RRAS
SACM1L
MFN2
ZNF277
DOCK4
HES1
GCHFR
RMDN3
BRIX1
FRAT2
TAF1B
ARL4A
FDX1
SPDYE14
SPDYE10P
CSRNP2
SNX33
IMP3
PSMD6
IPP
STK38
SLC43A3
PNRC1
ZNRD2
FAM89B
EHBP1L1
ARIH1
EXOSC10
RPL39L
COMMD1
CCT4
ZNF554
PLAG1
CHCHD7
SOD2
FADS2
FADS1
PKNOX1
TFAP2E
CAP1
TXNDC15
DNMT1
HSPA1L
HSPA1A
LSM2
UBE2K
NREP
SP7
SIT1
ASB1
RAB1A
LRRC59
RDH5
CD63
RPL10A
ZNF436
DNAJB2
MTRNR2L2
MSH3
DHFR
C6orf226
SMAP1
MIA2
SF3B2
GAL3ST3
CNPY3
PURB
EFHD2
ADORA2A
SLC16A6
SYNRG
SNUPN
ARL8B
FOXN2
CCZ1
ORMDL3
GSDMB
THOC3
GTF2H2
PDAP1
BUD31
DDX46
EEF1AKMT4-ECE2
EEF1AKMT4
ALG3
LRRC37A3
DSCC1
SYPL1
RTN3
ATL3
MYL12B
PLEKHN1
MYL12A
NOC2L
KLHL17
MAEA
NXF1
NSFL1C
CHPF2
ABCF2-H2BE1
ABCF2
STRADA
TMEM39A
POGLUT1
GCFC2
COPS8
CISD3
SUPT5H
RPS16
ANKRD36C
CBR3
ACOT11
TRMT61B
RBM15B
MANF
RMC1
GMCL1
TAF5
H2AB3
H2AB2
H2AB1
F8A3
F8A2
F8A1
RPS15
RNF141
SLC27A3
FADD
CYB5R4
RIPPLY2
AP5Z1
CHD2
F8
GTF2A2
ZC3H3
TMOD3
DNAJC11
MAPRE2
SLC38A10
KAT5
RNASEH2C
STAU2
H2BC5
H1-4
FOXS1
GNA13
TMEM217
TBC1D22B
AP4E1
CCZ1B
USP32
CHMP7
PBX2
GPSM3
ACAD9
GET4
FZR1
DOHH
NFU1
SSR3
BCKDK
POLR1F
MTRES1
KAT8
WDR27
C6orf120
NBN
BIRC2
MTF2
FAM53C
CDC25C
MAD1L1
NUDT1
MRM2
STX11
FLCN
MTHFD1L
ZNF593
C1orf232
CNKSR1
ME3
ARPP19
RARS2
ORC3
KIF23
PSMD11
SPRYD4
CCM2
ARID1A
PHF19
MAN2C1
SPPL2A
ZBTB2
CDK11B
CDK11A
AMACR
ZNF513
SNX17
EIF2B4
MALSU1
RPUSD4
FAM118B
UCKL1
C15orf39
SYNJ1
GPAT3
SELENOW
SDHB
DTNBP1
MALT1
MSANTD2
ACOX3
TRMT44
PGM2
ZNF451
CDIPT
WDR38
RPL35
ARPC5L
SNX1
CIAO2A
ZCWPW2
AZI2
RTN4
NELFA
MFSD11
METTL23
JMJD6
PGLS
WDR82
GLYCTK
MT1E
MT1M
MIB2
MUS81
CFL1
UNC50
COA5
FANCD2
DDX19B
AARS1
FAM91A1
TIPARP
SH3BGRL3
SETX
SP1
OSBPL3
WASF2
AURKAIP1
C5orf51
WDR61
ICE2
EMILIN1
OST4
PSMD3
IFNGR1
RLF
ZYG11B
MARCHF3
ANKRD13D
FAM133B
ARHGDIA
P4HB
MTHFR
CLCN6
ANKRD36B
FBXO22
CCDC134
UPF3A
UCHL5
RO60
POLR2M
WDTC1
MYLIP
KATNA1
CHRNB2
UBE2Q1
SAXO2
EFL1
TMEM127
CIAO1
TRIM13
RPN2
MROH8
LIG4
ABHD13
UBA52
STMN1
WTAP
TSGA10
NFKBID
TYROBP
HCST
ZBTB8OS
RBBP4
LATS1
RNF14
C11orf97
GABPB1
RMDN1
CPNE3
RUNX3
OTULIN
CCDC107
ARHGEF39
CA9
CASC3
AP5S1
WDR25
WARS1
NOP56
ZMAT3
GTF2I
TM9SF2
ZNF414
CDKN1A
PIKFYVE
FUNDC2
KCTD5
CASTOR2
TASOR
MARCKS
MAP2K5
HDAC1
MUL1
KLHL7
CLYBL
BCKDHB
NCOA3
FST
PSPH
CCT6A
ZNF696
HPD
PSMD9
SCRT1
DGAT1
PCTP
IST1
TEKT2
ADPRS
GPCPD1
PHF6
NME6
HSPE1-MOB4
HSPE1
HSPD1
HOXC6
MIDEAS
HOXC5
ZBTB9
EFCAB13
GSTP1
CAPN15
TOE1
MUTYH
NFRKB
FAM207A
MLLT11
CDC42SE1
EFCAB14
OVCA2
RRAGC
ZBED4
RPP21
CDC42SE2
CARHSP1
NGRN
IER3
FLOT1
SNRNP200
ECI1
KPTN
TMEM60
PHTF2
PLEKHM1
ITPRIPL1
USP3
CEP112
LONP1
CATSPERD
TGIF1
TRMT2A
RANBP1
NAA40
IER5
WASL
FBXO41
EGR4
PSMG3
SPAG4
TMEM205
RAB3D
CCDC159
BTBD1
MINDY2
LRRC47
TSN
TUBGCP3
HDAC2
ATR
MNS1
CRBN
WDR18
PDIK1L
BZW2
ANKMY2
MRPL2
KLC4
CUL7
ZNF740
CSAD
OGDH
POLE4
GGCX
CCDC88B
TBC1D14
TIMM44
MPC1
USP4
TRAPPC9
LY6G6F-LY6G6D
LY6G6F
CHIC2
ABHD16A
HMGN2
WDR70
NUP155
POLR2K
FBXO43
UHRF2
MED4
SNX19
ARMC2
MARCHF6
ZBTB40
TFRC
ARHGAP23
INTS8
MRPS15
GTF2IRD2
GTF2IRD2B
SSBP4
HNRNPF
MRPL4
LUC7L
FAM234A
PBRM1
GNL3
LCE3B
LCE3A
BHLHE40
POLR3D
TNFRSF9
URGCP
CEP164
LGALS1
UBE2D4
CPT2
PARP6
CBWD1
NOL11
FAM111A
FAM222A
ARMC12
FKBP5
RPL36
MICOS13
HSD11B1L
ESYT1
ID2
NIBAN2
SNX12
NOM1
TEFM
MLEC
PTEN
KLLN
TMEM50A
CYP4V2
CALM3
PPP5D1
CAPRIN2
PSMD8
PIGU
KAT2B
U2AF1L5
U2AF1
PPP1CC
GOSR2
ERMP1
PRRC2A
AIF1
PHLDA1
MON2
PC
LONRF3
DGKZ
PA2G4
MICU2
DOCK2
ZBTB45
SLC27A5
ATP5MG
DNAH7
RNF168
SGK1
CDKN2AIPNL
MFSD4B
PLXNC1
TMTC4
CIPC
LRCH3
TMED2
YKT6
SRSF2
STMP1
ITGB1BP1
CPSF3
IPPK
AGO3
MAN2B2
NR0B2
NUDC
SLC39A5
RNF41
NABP2
UFL1
DIABLO
CHMP4B
SLC43A1
GADD45B
TMEM248
GUSB
ANKRD36
MKS1
MIDN
UBE2Z
NDRG1
WDR73
NMB