ChIP-Atlas: Target genes

Potential target genes for RARA

Query protein: RARA
Distance from TSS: ± 1 kb  ± 5 kb  ± 10 kb
Sort key: SRX3584307 | iPSC derived chondrocytes
 
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  1000 750 500 250 1 0  (Values = Binding scores of MACS2 and STRING)

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Links: Movie and Document for ChIP-Atlas Target Genes
RARA's Target genes

◢ RARA: Average

◢ SRX2748853: Adenoid cystic carcinoma

◢ SRX2748855: Adenoid cystic carcinoma

◢ SRX10442515: BE(2)-C

◢ SRX8814860: BE(2)-C

◢ SRX2635935: Hep G2

◢ SRX2635936: Hep G2

◢ SRX25244558: hESC derived endodermal cells

◢ SRX25244559: hESC derived endodermal cells

◢ SRX25244560: hESC derived endodermal cells

◢ SRX25244561: hESC derived endodermal cells

◢ SRX21236745: IMR-32

◢ SRX21236746: IMR-32

◢ SRX21236747: IMR-32

◢ SRX21236748: IMR-32

◢ SRX3584302: iPSC derived chondrocytes

◢ SRX3584303: iPSC derived chondrocytes

◢ SRX3584304: iPSC derived chondrocytes

◢ SRX3584305: iPSC derived chondrocytes

◢ SRX3584306: iPSC derived chondrocytes

◣ SRX3584307: iPSC derived chondrocytes

◢ SRX3584308: iPSC derived chondrocytes

◢ SRX3584309: iPSC derived chondrocytes

◢ SRX3584310: iPSC derived chondrocytes

◢ SRX3584311: iPSC derived chondrocytes

◢ SRX3584312: iPSC derived chondrocytes

◢ SRX3584313: iPSC derived chondrocytes

◢ SRX6039037: iPSC derived chondrocytes

◢ SRX6039038: iPSC derived chondrocytes

◢ SRX6039039: iPSC derived chondrocytes

◢ SRX6039040: iPSC derived chondrocytes

◢ SRX6039041: iPSC derived chondrocytes

◢ SRX6039042: iPSC derived chondrocytes

◢ SRX3584300: iPS cells

◢ SRX3584301: iPS cells

◢ SRX19662659: Ishikawa

◢ SRX19662660: Ishikawa

◢ SRX4671297: NAMEC8

◢ SRX4671298: NAMEC8

◢ SRX4671299: NAMEC8

◢ SRX014752: NB-4

◢ SRX014770: NB-4

◢ SRX17639399: NB-4

◢ SRX17639400: NB-4

◢ SRX17639401: NB-4

◢ SRX17639402: NB-4

◢ SRX8814876: Neuroblastoma

◢ SRX9607665: NTERA-2

◢ SRX9607666: NTERA-2

◢ SRX1035586: SK-N-SH

◢ SRX1035587: SK-N-SH

◢ SRX1035588: SK-N-SH

◢ SRX1035589: SK-N-SH

◢ SRX4671312: SUM 159PT

◢ SRX4671313: SUM 159PT

◢ SRX4671314: SUM 159PT

◢ SRX19662634: T-47D

◢ SRX19662636: T-47D

◢ SRX682379: TSU-1621MT

◢ SRX014781: UPR9

◢ SRX014782: UPR9

◢ RARA: STRING

RABL2B
RABL2A
MAPKAPK5
POLR3F
DZANK1
PSMD1
NME6
IPO13
ZNF335
S1PR4
NCLN
DYNC1LI2
CACTIN
TAOK3
SUDS3
RWDD1
NUP85
NEUROG2
VDAC2
POLR2E
GPX4
VTI1B
MRPS7
MIF4GD
GGA3
LOC102724770
DGCR6
PSMG2
CEP76
HSPA9
NUP205
TSN
FAM187A
EFTUD2
CCDC103
TBCK
AIMP1
GOSR2
NVL
REXO1
DCTN1
TSNAX
RPL21
STAM2
SKP1
ZNF576
IRGQ
EXOSC5
BCKDHA
PES1
SEC61B
C19orf48
CAPRIN1
STAM
NNAT
BLCAP
SRD5A1
NSUN2
PNO1
RBBP5
SLC35B1
UPF2
LYRM4
FARS2
FARSB
ACTR10
DUX4
ATP5MG
NEUROG3
PCBP1
NDUFA4
PAK1IP1
C6orf52
HADHB
HADHA
GOLGA5
PSMD12
ZRANB2
TMED1
COX7A2L
VARS1
TTC8
DPH6
SUPV3L1
LBX1
ANAPC7
PI4KB
SART3
ISCU
UFM1
PDAP1
BUD31
TLE6
MRPS5
ICE1
FRG2C
RPL35A
IQCG
LMLN
SF3B3
COG4
SELENOF
HS2ST1
RPS23
ATP6AP1L
MRPL11
RABGGTB
ADK
AP3M1
RBKS
BABAM2
USP1
ARF1
PROSER1
NHLRC3
SMC2
FAM104A
C17orf80
SFI1
EIF4ENIF1
G6PC2
PIP4P1
OSGEP
APEX1
DNAJB7
XPNPEP3
ST13
RPS12
RPS27A
CLHC1
BICRA
PAF1
MED29
ICMT
HES3
ZNF503
HSPA1B
UBE2I
COMMD1
CCT4
TM9SF1
IPO4
TSSK4
OR6B2
NDUFA10
HES1
BNIP3
VEZT
FGD6
NBAS
MRTO4
EMC1
ARHGAP11A-SCG5
ARHGAP11A
ATOH1
LARP7
FZD8
ARID3C
DCTN3
PIN4
ADNP2
C6orf47
APOM
BAG6
RPS29
LRR1
RBBP7
GTF3C4
DDX31
WNT1
NEUROD1
INSM1
NFKBIL1
DDX39B
ATP6V1G2
UNKL
C16orf91
RPN1
ARHGAP10
CD79A
ARHGEF1
FRG2
SUCLG1
CDC73
NEUROG1
ZNF608
CCDC33
OAZ3
EIF2S3
NOTCH2NLC
NOTCH2
ANKLE2
TAF9
RAD17
AK6
GLRA1
ARL4D
PMAIP1
SKIL
NAV3
URM1
TPM1
RHBDD3
EWSR1
ADAM18
CDX2
SEC11C
RPL7
RDH10
PCBD2
NR2F1
PDHX
APIP
GADD45GIP1
CR1L
PPP1R1B
LPIN1
RAB11FIP1
PRUNE2
OR10AC1
ME3
CCDC200
NHS
ZGPAT
ARFRP1
EVX1
EVA1A
UNCX
STK36
RNF25
ZP4
PAH
ASCL1
PRDM12
SERINC5
ALKBH5
IGFBP2
PTGES2
DLX4
ZNF585B
ZNF383
PSMB5
KDM8
RIMKLB
SRSF11
LRRC40
LZTS1
CNPY2
TLE2
ANK2
PDHB
NOXO1
SYNGR3
GFER
PPP1R1A
ETS1
DBX1
DIPK1B
FGF19
SH2B1
AXDND1
PLAGL1
MUC20
RYBP
GORAB
CRYAA2
CRYAA
TMEM70
ELOC
SNAPC1
LRATD2
ECM1
ITGB6
ERRFI1
FAM222A
ECEL1
KIF26A
DDAH1
CCN1
KIF21B
SEC22B
WDR59
TRABD2B
LAMA4
HOXB1
CLDN2
PDE12
MYLK4
EIF4H
TEX46
KDM1A
NELFA
SLC7A5
RBPJ
DMBX1
SULF1
MEIS2
RGS12
CASC3
DLL4
PRRX1
BFSP1
DTX4
HK3
CLEC18C
MYRIP
KDM2B
SPCS1
GLT8D1
USP17L5
USP17L30
USP17L29
USP17L28
USP17L27
USP17L26
USP17L25
USP17L24
BBS9
LRGUK
MALRD1
TBC1D8
TMEM120B
RAI14
PDE6B
FAM118A
JAKMIP1
SYNPO
DDX3X
TPRA1
ASXL3
BRWD1
TLE4
NUTM2D
TMA16
CLGN
ZNF746
PPP1R35
ZCWPW1
MEPCE
GFRA3
NRDE2
CDIP1
ID1
HOXB3
HOXB4
SCGB1A1
CERCAM
TESC
TIGD1
EIF4E2
SOAT2
IGFBP6
ASB6
POP5
DGKZ
HOXA3
HOXA4
ZFHX4
TRIM65
MRPL38
MNT
ARL14EP
MBTPS1
C6orf132
GTF3A
NRXN1
SMARCA2
SLC7A6OS
PRMT7
HOXD3
HOXD4
B3GALT5
CNTLN
TDG
C12orf73
CS
PCBP2
SPHK2
RPL18
FAM83E
FABP7
SMPDL3A
SLC10A2
COL17A1
SYBU
DUSP6
FEZF2
GATA3
ZFHX3
PAX8
PNKD
IL17RD
DAPL1
FOXP2
TMEM212
SOX21
PGLYRP1
IGFL4
TRIM41
RFX2
VOPP1
LRIG1
ZNF341
LRRC1
USP17L21
USP17L20
USP17L12
USP17L22
RNF138
RPS10-NUDT3
RPS10
GADD45G
NRXN2
NCBP3
LRRC4
CCDC43
DMRT3
RNF32
MRPL3
ZNF285
MBNL3
ADGRL2
NEUROD4
MFSD3
GPT
RECQL4
LRRC14
ERCC1
RPS26
WDR47
SFT2D2
CHN2
CPVL
CADM3
ACBD6
RRM1
MXI1
GAD2
SKOR1
NPAS4
SRRM3
MDFIC
IFT20
TMEM97
TMSB15B
CALHM6
CCND1
ZNF292
RASL10B
AQP6
CBFA2T2
BAIAP2
CATSPERG
SLC39A6
ELP2
LDLRAP1
DUSP2
CLEC19A
ASTL
STARD13
DAAM1
PKNOX2
MUSTN1
ITIH4
RCOR2
TCHP
E2F6
TMEM275
CDH16
TPST2
RARA
CHD8
HNF1A
OR8J1
CPLX1
AP1B1
CNN3
C12orf42
SPACA1
TMEM107
HNRNPA2B1
CBX3
CDC42EP2
VANGL2
NEK7
DNAJB2
GPR20
SALL1
CLEC18B
ID2
RXRG
MYO10
CAMTA1
CDX1
GUCY1A1
EVI5
RUNX1T1
PARP11
SGK3
HHIP
FOXP1
MSX2
KMT2A
PEX2
DHX32
SEMA4B
HNRNPD
ZNF891
ZNF10
LRP2
RHBDD1
TRDMT1
LEKR1
RCOR1
ITPRIP
TNNI3K
KAT6A
NINL
TUBB3
MC1R
PLXNB1
RGL1
POLR2J3
MET
FTCDNL1
SCARB1
SEMA6D
PPFIBP2
TBC1D15
ZNF367
NEK3
USP17L13
USP17L11
USP17L18
USP17L10
USP17L17
USP17L15
YAP1
MAMDC2
MTRNR2L1
WDR74
STX5
RARB
MTRNR2L2
MSH3
DHFR
EAPP
HOXA1
DUSP29
DHRS3
MTRNR2L8
SP2
ARID3B
CYP26A1
SPATC1L
NFE2
IER3
FLOT1
HOXA2
PALM2AKAP2
PDE4DIP
H2BU1
H2AW
ZNF775
NDUFS7
ZSWIM1
SPATA25
NEURL2
CTSA
KCNN4
DPP9
KAT6B
TBL2
USP29
GPR108
LEFTY2
BHLHE40
TRIP10
CDH18
TLE3
PCGF1
PHOX2B
VSIR
METTL24
TTI2
LBX2
ARHGDIA
ST18
LIN28A
TBX3
HOXA5
P4HB
PHC2
MLEC
CDCA7L
ASB2
TEPSIN
NDUFAF8
NBEAL2
CCDC12
ARHGAP24
DNM2
TBX2
COL23A1
NCOA7
TAF12
CITED2
S100A10
SLC39A7
RXRB
HSD17B8
PPP6R3
HOXC4
SP1
FBXO31
SYTL3
HPD
MINDY2
SP5
FILIP1L
EXOC2
HUS1
MAP1LC3B
H2BC17
H2AC17
ANKRD28
FRA10AC1
COL11A2
SMAD3
HPCAL1
CNTN1
NFIA
PKDCC
BAZ2A
ARSG
RPL22
RNF207
FXYD2
XKR7
STX18
E4F1
RAB5B
PMEL
CDK2
ID3
STAP2
CRABP2
TLE1
TNFRSF19
ARHGEF28
TMEM242
MRPL34
DDA1
ABHD8
HOXC6
PDE4D
DOLPP1
OTUD7B
KDM6B
KANSL3
FER1L5
ARRDC4
GPC6
PGK1
SEPTIN9
DONSON
ABLIM3
VIP
UPF3A
DYNLT1
ETAA1
ATP5F1B
MAB21L2
POR
ATF6
FRYL
MSX1
JUP
PDZRN3
SH3BP2
ARHGAP22
PC
CERK
EXOSC4
KATNB1
RPS24
POLR3A
KCNAB2
BCL3
MRPL20
PANK2
PPCDC
TRIB1
NINJ2
RARG
PTK2B
BMF
CCDC174
IRF2BP2
FAM72C
SNX16
SQSTM1
CLCN3
TMEM101
CCNL2
ABHD2
SREBF1
GPCPD1
QPRT
ADAP1
RING1
SMARCD2
GATA4
SIRT4
NOTCH2NLB
NOTCH2NLA
MFSD10
MTMR4
PRKAG2
MIDEAS
ELOVL5
TOP2A
ABCC10
HEXIM2
TMEM9
SLX1B
SLX1A
LFNG
BOLA2B
BOLA2
ZNF687
SMG6
ZNF718
ZNF595
NBPF1
ZFP36
PLEKHG2
SACM1L
PSMB3
PCGF2
SLC2A9
CNOT2
TRIM46
KRTCAP2
RASSF5
NRL
ATP1A1
NOL4L
CALM2
FURIN
MUC3A
SPG7
KAT7
RNF34
HSPA1L
HSPA1A
SLC35E3
PCNA
RABGAP1L
MRPS31
EIF1B
CBX5
INHBE
GLI1
ANGPTL4
PSPN
ALKBH7
DACT2
RPL34
TLX2
DLC1
PPP1R18
NRM
SMIM28
RFX1
SOCS3
KAZALD1
ITGAV
C9orf92
ARHGAP30
THOP1
SGTA
POLDIP3
NUBP1
HNMT
NFKBIA
RHOQ
ATP6V1E2
TRAF7
EIF2AK3
FAM72D
ZFAND2A
STIP1
OSBP
SHC1
GRIK2
STAT1
PRDM10
RNF103-CHMP3
RMND5A
RPS7
DNAH1
ZNF77
SKI
ZNF740
DCAF11
CSAD
SHF
TRIM7
ATP1B1
MYBPC3
PSMD6
RAB26
SSBP4
RPLP1
TRIM26
CLDN11
HAND1
KNL1
ARRDC2
CDS2
IQSEC3
SEPTIN4
ZC3H3
SOD2
SERPINE1
ACYP1
PXYLP1
NR2F6
AHDC1
BRMS1
GADD45A
MDM2
GOT1
ECE1
SLC45A4
CCL26
RAB37
KMT5A
BORCS6
LPCAT3
HMGCS1
CAPNS2
AGO1
IKBKB
CAPG
TNFAIP2
SLC34A3
RGS3
CSF3R
DLG2
TCP10L
SPRED2
NLK
EMP3
SMIM20
TRIB3
POLG
TPCN1
ZNF564
CBX4
LMOD1
ANKHD1-EIF4EBP3
ANKHD1
STX1A
RTN4
FTL
PDP2
LMO4
NCOA2
BAHCC1
ART1
TCTEX1D4
PLK3
BTBD19
RAB11B
G3BP1
SOCS2
ADM
COL21A1
B4GAT1
LIG3
GLRX5
MACROH2A1
SLC35E2B
GRSF1
SH2D6
ZNF827
DSCAML1
CRLS1
MBD6
DDIT3
ZC2HC1C
RBFOX2
HTR1F
NEK1
TCF7L2
METRN
FAM107B
SYNJ2
MYEOV
KBTBD11
SCHIP1
CORO1A
ELL
TMEM94
MOB3A
IZUMO4
RBM15
NHLRC1
GMEB2
METTL11B
MIDN
ARHGEF3
IFI16
JUNB
CNPY3
METTL3
MTF2
FST
PKN2
SIT1
PRMT5
KDM3A
ANTKMT
CNKSR3
DAGLB
UBE2F
PLA2G2A
CTSW
EIF3D
WSB2
INAVA
UNC5A
LCK
FAM167B
NKD1
ARID5A
CPSF4L
ETF1
CSNK1D
MPND
SORL1
MRS2
SHB
KIF5C
BCAR3
SLC25A25
SLC6A12
CLDN9
PYGL
IGFBP7
SLC19A1
NCDN
KIAA0319L
KIAA1549
MRPS28
FGR
UBC
PPFIBP1
NKX1-1
TXNRD1
ZBTB18
SH3BP1
INKA2
CMSS1
ARID2
LRRC45
CENPX
NAGLU
TACC1
SLC30A4
LINGO1
PLEC
TUBA1C
KLF16
CYP51A1
ARAP1
PCM1
MMD
ATP6V1G3
ABCA4
TLN1
CREB3
CHODL
HNRNPL
H3C12
COX5A
SH3YL1
ACP1
METTL26
SORBS2
SPOCK2
PGP
ARID4A
RNPEPL1
DUSP28
ANKMY1
H4C14
H3C15