ChIP-Atlas: Target genes

Potential target genes for RARA

Query protein: RARA
Distance from TSS: ± 1 kb  ± 5 kb  ± 10 kb
Sort key: SRX2635935 | Hep G2
 
Color legends
  1000 750 500 250 1 0  (Values = Binding scores of MACS2 and STRING)

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Links: Movie and Document for ChIP-Atlas Target Genes
RARA's Target genes

◢ RARA: Average

◢ SRX2748853: Adenoid cystic carcinoma

◢ SRX2748855: Adenoid cystic carcinoma

◢ SRX10442515: BE(2)-C

◢ SRX8814860: BE(2)-C

◣ SRX2635935: Hep G2

◢ SRX2635936: Hep G2

◢ SRX25244558: hESC derived endodermal cells

◢ SRX25244559: hESC derived endodermal cells

◢ SRX25244560: hESC derived endodermal cells

◢ SRX25244561: hESC derived endodermal cells

◢ SRX21236745: IMR-32

◢ SRX21236746: IMR-32

◢ SRX21236747: IMR-32

◢ SRX21236748: IMR-32

◢ SRX3584302: iPSC derived chondrocytes

◢ SRX3584303: iPSC derived chondrocytes

◢ SRX3584304: iPSC derived chondrocytes

◢ SRX3584305: iPSC derived chondrocytes

◢ SRX3584306: iPSC derived chondrocytes

◢ SRX3584307: iPSC derived chondrocytes

◢ SRX3584308: iPSC derived chondrocytes

◢ SRX3584309: iPSC derived chondrocytes

◢ SRX3584310: iPSC derived chondrocytes

◢ SRX3584311: iPSC derived chondrocytes

◢ SRX3584312: iPSC derived chondrocytes

◢ SRX3584313: iPSC derived chondrocytes

◢ SRX6039037: iPSC derived chondrocytes

◢ SRX6039038: iPSC derived chondrocytes

◢ SRX6039039: iPSC derived chondrocytes

◢ SRX6039040: iPSC derived chondrocytes

◢ SRX6039041: iPSC derived chondrocytes

◢ SRX6039042: iPSC derived chondrocytes

◢ SRX3584300: iPS cells

◢ SRX3584301: iPS cells

◢ SRX19662659: Ishikawa

◢ SRX19662660: Ishikawa

◢ SRX4671297: NAMEC8

◢ SRX4671298: NAMEC8

◢ SRX4671299: NAMEC8

◢ SRX014752: NB-4

◢ SRX014770: NB-4

◢ SRX17639399: NB-4

◢ SRX17639400: NB-4

◢ SRX17639401: NB-4

◢ SRX17639402: NB-4

◢ SRX8814876: Neuroblastoma

◢ SRX9607665: NTERA-2

◢ SRX9607666: NTERA-2

◢ SRX1035586: SK-N-SH

◢ SRX1035587: SK-N-SH

◢ SRX1035588: SK-N-SH

◢ SRX1035589: SK-N-SH

◢ SRX4671312: SUM 159PT

◢ SRX4671313: SUM 159PT

◢ SRX4671314: SUM 159PT

◢ SRX19662634: T-47D

◢ SRX19662636: T-47D

◢ SRX682379: TSU-1621MT

◢ SRX014781: UPR9

◢ SRX014782: UPR9

◢ RARA: STRING

NPAS4
PLA2G2A
SLC45A4
DNAJB3
SLC6A12
XKR7
CYP26A1
ZNF775
IQSEC3
NBEAL2
CCDC12
THOP1
SGTA
TTC6
FOXA1
CCL16
CCL14
MFSD10
ANKS4B
SMIM11B
SMIM11A
AIFM2
INSM2
PYGL
HTR5A
DHRS3
RHOQ
ATP6V1E2
ELOVL5
ZSWIM1
SPATA25
NEURL2
CTSA
ELL
ARID3B
MRPL20
CCNL2
SH3YL1
ACP1
GPC6
NHLRC1
FURIN
UGT1A1
CCDC38
AMDHD1
LIN28A
TRAF7
RAB26
COL5A3
BHLHE40
LCK
FAM167B
TCP10L
NKX1-1
SPOCK2
IRF2
KRT39
NINJ2
KLHDC2
RHBDD1
IRS1
PHETA1
DPP9
FRYL
FOXA3
SPINK1
SLC39A7
RXRB
HSD17B8
COL11A2
RING1
ABCC10
CCR6
KCNH7
NAT8
ARAP1
HOXA3
HOXA4
HOXA5
ITGAV
ATP2B2
FAM24A
FGG
TNFAIP2
BACE1
NFE2
PCGF1
LBX2
RNF144A
SMIM22
ROGDI
RGS3
RPL22
RNF207
RHBG
VSIR
DONSON
CSF3R
CARD14
AGPAT3
OSGIN1
ARRDC2
SOCS2
SREBF1
INHBE
GLI1
DUSP9
KCNE2
TRIM26
ASB2
FST
BMP4
UACA
SQSTM1
WSB2
TRIM46
KRTCAP2
RAC1
RARA
CRLS1
ZNF564
DAGLB
PDE12
UBE2F
KCNN4
AGT
COL18A1
HAUS5
CELSR3
RARB
CAPG
SH2D6
DCDC2
IRF9
HOXA1
A2M
STRN3
AP4S1
TMEM86A
TLCD4
TLCD4-RWDD3
CXCL17
LIPE
ZFP36
PLEKHG2
ADSS1
SERPINF2
ZGPAT
ARFRP1
SPATA2L
CEMIP2
PC
NEU4
PCK1
LRP5L
PTK2B
TMEM80
DEAF1
EPS8L2
CX3CL1
PLEKHF2
ANKRD28
PAQR8
TF
ARL8A
TRIB3
NINL
APOC1
APOE
CDK3
L1CAM
ZCCHC14
ATP1B1
TMC7
SCGB2A2
ADAP1
FGB
PLRG1
SDSL
NANOGP8
IL1RL2
E4F1
DNASE1L2
PIWIL2
NR2F6
SPCS1
GLT8D1
DACT2
GLRA1
OMP
OARD1
NFYA
LMNA
MEX3A
ECE1
RAB37
APOC2
APOC4
EXOSC4
OPLAH
RASGRF1
ETV4
TET2
SOAT2
IGFBP6
NUBP1
SMIM17
CSNK1D
DNAH1
GGT1
PARP9
DTX3L
LRRC75B
ACSL4
FILIP1L
CMSS1
TRPM1
GPRC5C
GPAT4
RAB5IF
TRIM11
POLR3H
ST6GALNAC6
HPCAL1
POR
ZFAND2A
CYP3A7-CYP3A51P
CYP3A7
ERCC1
FGA
FOXP4
BRCA1
PRR35
NHLRC4
NSMCE1
CPLX2
CLNS1A
H2BC17
H2AC17
H3C12
ARHGEF28
LRRC20
CELF1
PTPMT1
PLEKHA7
MEIOB
CAPNS2
SORL1
HNRNPAB
ZC3H18
TCIM
GMCL2
NPAS2
CHN2
CPVL
PACSIN3
EGFL7
ARFGAP2
RAB17
NOL7
SLC30A4
SECTM1
C1orf115
TRIB1
SERPINB9
NIPSNAP1
TRIM44
ADGRG3
GDF15
NME4
DECR2
SLC50A1
EFNA1
NDUFV2
FAM107B
COG1
NEDD9
PIGV
MLLT6
PPP1R35
USP48
FASTKD1
GPCPD1
TIGD2
ID1
CXADR
TANK
TMEM37
H2BU1
H2AW
SLC4A11
EIF1B
SERPINE1
ABCC6
PCIF1
HNF4A
SLC51B
AMBP
MRPS28
CCDC65
ETF1
TNFSF4
SEMA7A
NDUFS7
PLGLB2
PLGLB1
NEK10
ERRFI1
COMT
KRTAP5-6
ACTL7A
C9orf152
PROC
ERBB3
IL27
NIN
TACC1
BHLHA15
F2
SMAD3
MACROH2A1
EPHX1
GSN
ITGAE
UBAP2
ADGRA1
SHPK
CTNS
PRR15L
NRSN2
SIRT1
MUS81
CFL1
OTUD7B
SPAG9
CAT
MBL2
DUSP1
MAST1
RTBDN
NAGLU
APOC3
APOA1
APOA4
MINDY2
ITPK1
LDLR
DAPK1
ZNF22
TMEM270
ABCA4
SLC4A3
MAMSTR
AKAP1
GPT2
SSTR5
APOB
ACSS1
LEKR1
ATG16L1
MTRNR2L2
MSH3
DHFR
TMTC4
PRM3
PRM1
RBFOX2
CTSW
C4BPB
HAL
C1RL
CALML3
BARHL1
NBPF1
IER3
FLOT1
TMEM169
PECR
ANGPTL4
MOB3A
IZUMO4
RBKS
BABAM2
PDE6G
FBXO31
MAP1LC3B
RASAL3
LYST
MYH4
STX1A
PAH
ZNF181
SSBP4
ALDH4A1
FARP1
NTAN1
NCOR1
RAB42
WNK4
VPS25
EEF1AKMT4-ECE2
EEF1AKMT4
ALG3
VWA5B2
SLC47A1
HPD
CSF3
TRNP1
CETP
MTUS1
ZKSCAN1
BAIAP2
NKPD1
RARRES1
TRIM24
CCDC57
SDC4
PNPLA3
BCL3
TDRD9
ATP5MPL
MIXL1
NFKBIA
RTN4
CST3
INPP5D
TLE1
NOL4L
MIDN
ATP5F1D
CBARP
MAPK8IP2
MARCHF3
PPP6R3
SHFL
CTNNA1
TMPRSS3
ARHGAP40
SCYL1
TOP1MT
ARFGEF2
CST5
PRKAG2
FRMD5
RCBTB1
APEH
CA1
SYNJ2
PON2
GPR20
PHF21A
TBL2
AUNIP
PHF8
NDUFS1
EEF1B2
PSPN
ALKBH7
UMPS
ZNF7
FAM20A
NRL
DCAF11
USP50
RNF103-CHMP3
RMND5A
GFOD2
AGMAT
ITIH2
MPC1
SRC
SPINT4
TRIM25
PRIMA1
KIAA0232
SPG7
PTPN23
COG2
NR1H4
C3
FAM83G
PCK2
TRIM47
SLC7A2
UCHL3
COMMD6
BEAN1
SLC6A9
CPNE7
TUBGCP3
ECI2
SEPTIN9
UAP1
SH2B1
CHGB
MBNL3
NR1H3
ACP2
C16orf87
HIVEP2
DHODH
CRLF1
TMEM59L
PDE4D
SLCO4A1
CDC42EP1
LRP11
CDC42BPA
MRPL33
MIPOL1
PPP1R14A
SLC25A51
IGFBP4
C11orf86
SOX9
NR0B2
NUDC
EPHA10
NR1I3
NTMT1
DDB2
FUT1
FGF21
TRIM31
SLC13A3
SPDYE6
LOC100289561
ROBO3
ATP2C2
LGALS2
TMEM88B
VWA1
CERK
ASAP2
RCC2
SLC12A5
MMP9
PSMD1
IL6ST
SH3PXD2A
MTRNR2L1
LRRC27
FETUB
SDF4
B3GALT6
C1QTNF12
NCS1
NEK4
ITIH1
P2RY11
EIF3G
PPAN-P2RY11
PPAN
RNF113B
TMIGD1
C3orf84
HSPA1L
HSPA1A
LSM2
LEPROTL1
RCL1
DLGAP3
ARHGAP18
CBSL
CBS
CDK5RAP1
SMARCD2
MRPS31
ZNF367
G6PC
LARGE1
REXO1
KLF16
BCKDK
EDARADD
SEC14L4
AHDC1
KPNA2
METRN
ANTKMT
CCDC78
SLC2A8
BCAR1
AGO2
HS6ST1
ORMDL3
GSDMB
JAK1
CCR7
NAPB
HERC5
SERPINA12
AGPAT2
MLEC
PRCD
CYGB
GNAZ
FSTL3
ROCK2
IAPP
LRMDA
PPCDC
ZNRF3
TCAF1
TMEM9
PGAP3
ERBB2
CLDN16
RASSF5
ATP6V1G1
LDLRAD1
SYNPO
ERICH5
WDR74
STX5
EBF4
TOP2B
TCOF1
CRTC1
C6orf136
STK19
LOC110384692
DXO
C4B_2
C4B
C4A
MTRNR2L8
CCS
CCDC87
BCL2L1
SNAP25
SST
PLIN4
ESRP2
MLXIPL
NPM2
PPP1R18
NRM
CPT1A
RPGRIP1
TSC2
NTHL1
SLC9A3R2
SOCS3
SLC20A1
AOX1
MAMDC2
TXNDC11
NUP93
GRAP
BMF
TM4SF19
TRIM74
TRIM73
CPB2
TCIRG1
NDUFS8
ECH1
CPE
CPS1
BORCS6
FASN
SYCE3
RASSF6
SNX33
OTUB1
COX8A
AXIN2
MRPS24
TMEM252
ETFB
ZNF497
A1BG
NDUFAF5
ESF1
GIP
ADCY9
SRP14
SERPINF1
WBP2
UNC13D
KAZN
EAPP
SLC35E2B
DHRS4L2
CHKA
COPS8
SRCIN1
TBX4
TTI2
FBXO25
SEMA4G
CCL15
SLC29A4
RNF213
SCAP
ZDHHC19
SLC51A
HSPA1B
ANKRD39
SEMA4C
USP42
GRAPL
PTP4A1
ARSF
ZBTB45
SLC27A5
ANGPTL8
IQGAP2
CEP85L
NQO2
GTF2E2
SERINC2
ATP5MC1
FAM174C
EFNA2
STAT5B
PDE4C
RARG
FAM110B
BAZ1A
TOMM40L
APOA2
FCER1G
PROZ
IL6R
GSTP1
XKR9
LACTB2
SEC23A
CEBPB
HSCB
CHEK2
ZNF503
KDM6B
MYL12B
E2F3
LOC100509620
ZMIZ1
RIPOR3
DNAJA2
IGFBP1
CYP3A43
PSMB3
PCGF2
DNAJB1
PIM1
ABCD3
NLRC4
CAPN3
SERPINB6
RER1
MORN1
IL1R1
CADM3
PLTP
XBP1
CNOT2
THUMPD3
CEP250
BDH1
MOGAT3
SLC10A1
TMEM123
SEBOX
STK24
VTN
SARM1
CDH1
VAMP8
VAMP5
PIGS
ALDOC
LHPP
LRRC69
ALAD
SYT8
TNNI2
DCAKD
NMT1
RPUSD3
ATP8B1
PCNA
CDS2
ERN2
MT2A
CLK1
IFT52
MRPS11
MRPL46
BHMT
TMEM8B
FAM221B
MGST2
CYP3A5
TM4SF1
TST
MPST
NEU1
PACSIN2
HECTD4
SCRT1
DGAT1
AKTIP
RBP5
CLSTN3
ZNF17
NAA38
KCMF1
CHD3
SPRED2
PRUNE1
MINDY1
TOPBP1
WWP2
DLC1
INPP1
OBSL1
INHA
G0S2
ZNF23
LOC644090
EZR
LOC102724265
SAMHD1
C20orf204
CLDN1
MCUR1
SMG1
SULT2B1
GPN2
ITLN2
LRRC45
CENPX
NOMO3
UHRF1
ARRDC5
ATP13A3
CYP1A1
CBR1
PEBP1
TMED5
CCDC18
ACTR3C
FAM3B
CCND1
KRTAP10-12
RTN4RL2
FOXJ1
BCL11B
EPAS1
CEACAM16
KLF6
ENOX2
ELF3
CD7
SHB
RAPGEFL1
SCN1B
HPN
DIDO1
IL17F
ZPR1
APOA5
STMN3
RTEL1
EXOC3L4
THRSP
RNPEPL1
DUSP28
ANKMY1
RNGTT
NDST1
HBA2
HBM
TGFB1I1
SLC5A2
ATP4A
KRTAP5-8
KRTAP5-7
KANSL3
FER1L5
NKD1
SMIM35
PSD4
RGN
TRIM40
OR1F1
MLANA
PANK2
URGCP
TARS1
URGCP-MRPS24
LAMP1
RPS6KB2
PTPRCAP
RNF10
COQ5
CERS2
ANXA9
LHFPL5
CLPS
H6PD
RNASEH1
RRBP1
HSPA4
BANF2
TTYH3
LMNB2
FOXP1
LASP1
NT5E
MED11
ZMYND15
CXCL16
TGM2
MAOB
KRT8
CHD9
IBTK
CYP19A1
SLC16A5
WDR90
CREB3L1
VPS13A
HIPK1
GPR171
VWC2L
MMP24
TMCO6
NDUFA2
IK
TRAF3IP2
TMEM53
ARMH1
CD14
LSM14A
TTC7A
MCFD2
EMC3
SUN5
BPIFB2
BSPRY
RCAN1
PFKFB1
APEX2
MAFK
GFOD1
PDK4
NANP
LNX1
RGS19
OPRL1
LKAAEAR1
HCRT
TSSC4
KCNH4
CYB5R4
RIPPLY2
RAB35
KLF3
PRSS48
KPNA7
MRPL2
KLC4
CUL7
CCL20
AP1M1
C19orf12
SERPINA11
MYT1
IDH2
EIF4EBP1
NDUFS5
MASP2
CHD1L
ZNF101
ATP13A1
XRCC4
TMEM167A
FMO5
C3orf86
SUN2
ARRB1
BAK1
CS
MRPS23
ADGRG6
NGEF
LPIN1
ZNF343
GRAMD1A
NTSR2
APP
CABLES1
MYO1B
SRCAP
LOC730183
MED9
KHK