ChIP-Atlas: Target genes

Potential target genes for RARA

Query protein: RARA
Distance from TSS: ± 1 kb  ± 5 kb  ± 10 kb
Sort key: SRX2748855 | Adenoid cystic carcinoma
 
Color legends
  1000 750 500 250 1 0  (Values = Binding scores of MACS2 and STRING)

Download: TSV (text)
Links: Movie and Document for ChIP-Atlas Target Genes
RARA's Target genes

◢ RARA: Average

◢ SRX2748853: Adenoid cystic carcinoma

◣ SRX2748855: Adenoid cystic carcinoma

◢ SRX10442515: BE(2)-C

◢ SRX8814860: BE(2)-C

◢ SRX2635935: Hep G2

◢ SRX2635936: Hep G2

◢ SRX3584302: iPSC derived chondrocytes

◢ SRX3584303: iPSC derived chondrocytes

◢ SRX3584304: iPSC derived chondrocytes

◢ SRX3584305: iPSC derived chondrocytes

◢ SRX3584306: iPSC derived chondrocytes

◢ SRX3584307: iPSC derived chondrocytes

◢ SRX3584308: iPSC derived chondrocytes

◢ SRX3584309: iPSC derived chondrocytes

◢ SRX3584310: iPSC derived chondrocytes

◢ SRX3584311: iPSC derived chondrocytes

◢ SRX3584312: iPSC derived chondrocytes

◢ SRX3584313: iPSC derived chondrocytes

◢ SRX6039037: iPSC derived chondrocytes

◢ SRX6039038: iPSC derived chondrocytes

◢ SRX6039039: iPSC derived chondrocytes

◢ SRX6039040: iPSC derived chondrocytes

◢ SRX6039041: iPSC derived chondrocytes

◢ SRX6039042: iPSC derived chondrocytes

◢ SRX3584300: iPS cells

◢ SRX3584301: iPS cells

◢ SRX19662659: Ishikawa

◢ SRX19662660: Ishikawa

◢ SRX4671297: NAMEC8

◢ SRX4671298: NAMEC8

◢ SRX4671299: NAMEC8

◢ SRX014752: NB-4

◢ SRX014770: NB-4

◢ SRX17639399: NB-4

◢ SRX17639400: NB-4

◢ SRX17639401: NB-4

◢ SRX17639402: NB-4

◢ SRX8814876: Neuroblastoma

◢ SRX9607665: NTERA-2

◢ SRX9607666: NTERA-2

◢ SRX1035586: SK-N-SH

◢ SRX1035587: SK-N-SH

◢ SRX1035588: SK-N-SH

◢ SRX1035589: SK-N-SH

◢ SRX4671312: SUM 159PT

◢ SRX4671313: SUM 159PT

◢ SRX4671314: SUM 159PT

◢ SRX19662634: T-47D

◢ SRX19662636: T-47D

◢ SRX682379: TSU-1621MT

◢ SRX014781: UPR9

◢ SRX014782: UPR9

◢ RARA: STRING

LPCAT3
RARB
PDE12
RNASE6
EDDM3B
MRPS28
ING1
CARS2
PXYLP1
NDUFS7
CBX5
HNRNPA1
OTUD7B
RBKS
BABAM2
CNOT2
POLD2
ZBTB7C
FRMD7
RARG
GATD3B
GATD3A
ZNF775
SMARCD2
KANSL3
FER1L5
NFE2
MAMDC2
ZCCHC24
ZNF827
GPRC5A
ATXN1L
REEP6
PCSK4
WDR7
CLK1
TAF1A
PKN2
MRGBP
HORMAD1
DONSON
METTL3
TUBB
MDC1
FTL
BAX
MTRNR2L2
MSH3
DHFR
RAE1
MTRNR2L3
IER3
FLOT1
RPGRIP1
SYTL3
DYNLT1
ZFP36L1
ZGPAT
ARFRP1
CAPN1
KDM3A
WDR74
STX5
CCDC174
NANP
MBD2
PPP1R14B
VEGFB
LOC114841035
FKBP2
KIF5C
STX18
RASA4
MTRNR2L8
ASNSD1
ASDURF
MAMLD1
PDE6B
RASA4B
EIF5
MAML3
GPR108
TRIP10
KDM6B
CTF1
BCL7C
NR2C1
NUDT15
PHB2
UQCR11
USP42
BACE2
MTRNR2L1
SKIDA1
MLLT10
SLC10A5
IMPA1
ZNF395
RARA
C19orf12
LIPA
UROS
BCCIP
KLK9
KLK11
KLK10
PTGES3
ARHGAP12
HECTD4
TRIP12
FBXO36
USP1
CTBP2
FAAP24
CEP89
TRMT1L
SWT1
MPZL1
CLCN3
NEK1
TMEM241
STAT2
APOF
BCL9L
ARHGEF35
PMPCB
ARHGEF5
MIGA1
DNAJC16
CASP9
DUS1L
RNASE4
ANG
CTSW
DUX4
CYB5R4
RIPPLY2
SMIM3
SNRPA
C19orf54
AZGP1
KRT19
KRT15
ANTXRL
DPH2
ATP6V0B
B4GALT2
PLEKHA8
FKBP14
MRPS31
ANKS1B
CFAP69
SLC29A2
PPP2R5A
PPP1R13B
FOXP1
INTS5
GANAB
NOTCH2NLC
NOTCH2
COL23A1
NCOA7
TRABD
MED9
TEX264
RPL37
CARD6
USP37
CNOT9
PDCL
NAGLU
CBR4
SMIM20
UQCRC2
FXYD3
RPL22
RNF207
CPNE6
SREBF1
ABHD11
FAM78B
S1PR4
NCLN
FRG2C
BAZ1B
ALDOA
SEPTIN2
HDLBP
TSPAN10
NPLOC4
KMT5A
SLC25A16
FKBPL
ATF6B
DRG1
SZT2
MED8
SERTAD2
LOC105378979
GMNN
PSMB4
SOAT2
IGFBP6
SYTL1
CDC42SE2
METTL25
CCDC59
COLEC11
RASAL1
RNF121
LOC100133315
CSH2
TRIM48
ZSWIM8
CHCHD1
FUT11
TECPR1
CDC20
MELTF
RPLP0
GCN1
SENP8
MYO9A
ST8SIA6
NPNT
MINDY3
SH3YL1
ACP1
RNF220
RGPD1
RGPD2
ZSWIM1
SPATA25
NEURL2
CTSA
AARS2
MRPL54
APBA3
RAX2
ABCC10
CAPNS1
TP53INP2
C6orf47
APOM
BAG6
SH2B1
ADAM17
ABHD3
PARP9
DTX3L
TM4SF1
NFIC
TXNL4A
PLA2G6
MTRNR2L9
AFF1
HBP1
COL27A1
SLC11A2
EN1
SMIM22
ROGDI
TDG
C12orf73
RPS3A
FAM20B
VPS26C
TNPO3
TDRD3
CCL28
SOD2
WTAP
MYADM
GDPGP1
CIB1
KLHDC2
RPL5
FDXACB1
C11orf1
ALG9
EAPP
TRIB1
SIPA1
MRPS16
DNAJC9
DNAJC27
ATXN2
TNFAIP8L2-SCNM1
TNFAIP8L2
MKRN3
SCNM1
LYSMD1
PCCA
RIMS1
EXOSC4
GPAA1
TTK
PDCD10
SERPINI1
ARRDC2
PCTP
KRI1
CDKN2D
SEMA4G
RPS19
DBP
CA11
SAMD12
SPIN1
KBTBD3
AASDHPPT
EPM2A
ZBED9
ENTPD5
BBOF1
FGF13
ZNF133
VARS1
NAA40
DCPS
TLR5
BRD2
NOTCH1
CDH11
TF
FABP5
ZNF77
MBD6
DDIT3
CGGBP1
NARS1
C3orf38
ADH1C
SRPX2
TSPAN6
PACSIN2
ACYP1
ZC2HC1C
CDC42EP1
CCDC200
RBM19
PSMB3
PCGF2
MUC3A
SULF2
DCLK1
SLC30A4
CEP70
SRCAP
LOC730183
TRIM11
TRIM17
CLDN11
TRIM54
SLC30A3
DNAJC5G
MINDY2
PTEN
KLLN
POLR2G
UBE2V2
SLC39A9
ERH
TAF6L
ARIH2
DHRS3
MDM2
SEC24C
ARID4A
DZIP3
CIP2A
ZNF746
DUSP4
CLK2
HDAC9
ZASP
SAP25
TEX12
BCO2
LCN2
ZNF384
KAT6B
AP1B1
TRIM38
ASB1
TMED10
ETFRF1
CFAP94
TMED5
CCDC18
NEPRO
SKIV2L
NELFE
ESRP1
ABHD14B
ABHD14A-ACY1
ABHD14A
PCBP4
ACY1
AP2M1
ACSS3
PRUNE1
MINDY1
CD46
STAM2
H2BC17
H2AC17
OR2B2
SNX12
KLHL24
TBC1D22A
KCNQ4
SMPD2
PPIL6
FDX1
KLF5
OTUD5
MIEN1
GRB7
ANXA7
PSPN
ALKBH7
TCP11
DPP9
URGCP
IFT22
URGCP-MRPS24
POMP
DNAH14
MACROH2A1
ZNF85
ERCC1
NOTCH2NLB
NOTCH2NLA
SCAP
ZNF318
CACNB2
DLG2
LEKR1
GBA
IGSF10
ECH1
SPATS1
LSM8
HGH1
ODF3L2
MADCAM1
LETMD1
TXNDC11
SPAG16
CLECL1
GPATCH8
SLC25A35
RANGRF
IVNS1ABP
LARP1
CNP
ADA
SEC23A
OSGIN2
HNRNPA1L2
ARHGEF25
DTX3
SP2
LRRC1
RPS8
MRPS33
DYNLL1
CCDC102A
ADGRG5
SRSF9
CFAP73
MAMSTR
PIM3
TRIM26
ZBTB20
AKTIP
INPP5K
ANO1
GRK6
MICALL1
SNRNP35
SYS1
DKC1
ANAPC15
LAMTOR1
SLX1B
SLX1A
BOLA2B
BOLA2
BOLA2-SMG1P6
SULT1A4
SULT1A3
SMAGP
RPL34
ADM
SLC22A4
SLC25A53
FAM199X
KBTBD2
KCTD9
CDCA2
HAUS5
MRPS36
TTC28
POLDIP3
ACTR3C
ATP6V0E2
B4GALT6
PRR3
GNL1
RAB3GAP2
TBC1D8B
ZBED6CL
LRRC61
RNGTT
EPN1
RNF44
CDHR2
PTBP3
CEP78
PHGDH
ESR2
CS
MCOLN1
ZNF358
CCDC71
KLHDC8B
CYP4F11
NFKBIA
PIK3CG
LEO1
TP53INP1
TAOK3
SUDS3
OPTN
CCDC3
TJP3
ACBD3
CXCR4
ZMIZ2
WWTR1
HEXIM1
CNDP2
ZXDC
ZNF492
CAND1
ZNF446
ZNF324
CLIP1
HIC1
ELOVL4
LUC7L2
IQANK1
FAM83H
FAM3C
EXD2
TRIM2
FSTL3
C11orf91
PRKD2
ATL1
CSTA
MAP4K5
C12orf65
OLFML2A
NR6A1
KCNS3
OR8B12
OPTC
RFLNA
CDC45
UFD1
XRCC6
DESI1
MFSD11
SRSF2
GP9
TRAM1
TMEM262
PSMA3
C16orf70
QSER1
DNAJA2
KRT14
TRIM7
PAXBP1
FAM114A1
SEC61B
KMT5C
TMEM167B
PITX3
GBF1
LOXL4
PCARE
IRF9
ENOX2
MYL12B
CPNE7
MYL12A
AXDND1
STK11
FAM178B
TMPRSS12
COX5A
MT2A
NEK2
PCBP2
GTF2H5
RAB18
CLDN15
IRAK1
NUDT17
CCDC120
SBNO1
PCDH1
PLBD2
SCYL3
CSTB
MED12L
PRKACA
PEX2
BAG2
MGAT1
ANO6
FZD4
LOC102724770
DGCR6
BBS9
ST3GAL4
CLK4
LMF1
SOX8
RBM7
C11orf71
DDX1
TRAPPC6B
PNN
MPZL2
TCF7L2
RNF10
COQ5
TMEM79
SMG5
PELI2
DCAKD
AASDH
SLC3A2
CLUAP1
C16orf90
IRX3
TENT2
THAP7
SLC38A1
ZNF563
OSBPL1A
ZFP41
ZBTB44
ZNF22
DHX35
EVL
EPHA7
KCNN4
CALM2
B4GALNT3
ACADM
SRSF3
C2orf73
MRPL34
DDA1
ABHD8
CSF3R
RPS9
POMZP3
GOPC
TSEN34
HMGN3
SINHCAF
POLR2B
NOA1
SIRT4
OSR1
PLEKHG3
BCKDK
LRRC59
MFSD8
ABHD18
CRNKL1
CFAP61
FMC1-LUC7L2
FMC1
P4HA1
PSMD14
DYRK2
RNF135
OR6B2
NDUFA10
CASD1
CLDN7
COMP
RAB11FIP2
LOC391322
SLC9C1
DSG2
AGPAT3
ADRM1
SLC4A2
CDK5
ASIC3
SLC5A10
TOE1
MUTYH
SIKE1
DNAH12
RNASE1
RINL
CDC14A
DNAJB1
TPD52L2
ABHD16B
PRPSAP1
LAMTOR5
ZDHHC3
EXOSC7
TECR
SLC30A7
EXTL2
PPEF2
MOG
FEM1A
PYROXD2
KRIT1
ANKIB1
CD320
CLDN4
ZNF76
S1PR2
EEF1A1
MRM1
DHRS11
OSER1
ARHGEF33
CLDN19
UPK3BL2
SPDYE2B
SPDYE2
FRMD3
CALD1
NLRX1
PRCP
DDIAS
CCDC9
PPP1R10
MRPS18B
ATAT1
TAF2
MYOZ3
SYCP2L
GCM2
VAV1
SH2D3A
ZNF891
ZNF10
CALML5
FRG2
SNRPF
CYB5A
RNF168
POLG2
DDX5
CEP95
USF2
ZNF69
HEXIM2
SCNN1A
LTBR
MAPT
CCDC183
DTNB
RND3
RABL6
RPL23
WARS2
EFS
IL25
HUS1
UFSP1
ACHE
NADSYN1
DHCR7
SHPRH
WDR81
TLCD2
ENOSF1
GPRIN2
LRRCC1
GFM1
ZNF572
SQSTM1
C2CD4D
SYPL1
RORC
DYM
COP1
PRELID3B
LZTS2
NXPH3
SPTBN4
BLVRB
GNG7
ZNF484
CCDC130
AMER1
ATP1B1
ZBTB45
SLC27A5
NUP85
PTBP1
ZBTB7B
LENEP
CORO1A
HYAL1
HNRNPLL
HYAL2
OBP2B
POLRMT
FGF22
TXNRD1
CTNNA1
TEAD3
DSC2
ELP6
SEMA3E
PNKD
CCDC38
AMDHD1
SNX3
DCAF10
KLHL7
SRSF5
GCAT
RASD2
H1-0
NINJ1
ADCK1
EBAG9
BMI1
COMMD3-BMI1
COMMD3
LTBP3
PRKCD
SLC25A6
MTMR11
NEDD4L
LGALS2
TAF12
TKFC
DDB1
PPIL2
GSPT1
WDR43
HMG20B
STK32C
MDH1B
FASTKD2
BARX1
NIBAN2
FOXJ1
TMEM209
SSMEM1
SRSF7
PAK4
AQP5
AQP2
NOD1
CRY2
DENND6A
GXYLT1
SIK3
CDK13
ANKRD50
THUMPD3
CYB5R2
GSTT2B
DDTL
DDT
MARVELD3
HIBADH
RUFY1
POLR3B
MDP1
CHMP4A
GIT1
ANKRD13B
SPEG
HES4
ZNF506
KHNYN
CBLN3
GOLT1A
PNISR
REL
UQCRH
LRRC41
HINT3
PGAM1
ZNF675
RFLNB
GSE1
MTFP1
CTR9
ITGB3BP
EFCAB7
ACTG1
SIT1
CCDC88B
FOXJ3
NDUFS6
MRPL36
GABPA
ATP5PF
PLPP2
DMAP1
C1GALT1
LOC100421372
HSPA14
CDNF
MAIP1
ZNF335
RABL2B
RABL2A
PSMD1
MAPKAPK5
NME6
RWDD1
CACTIN
POLR3F
DZANK1
IPO13
DYNC1LI2
VDAC2
PSMG2
CEP76
FAM187A
EFTUD2
CCDC103
POLR2E
GPX4
HSPA9
NVL
VTI1B
NUP205
RPL21
GOSR2
TBCK
AIMP1
REXO1
MRPS7
MIF4GD
GGA3
ZNF503
EXOSC5
BCKDHA
DCTN1
C19orf48
ATP5MG
HADHB
HADHA
SRD5A1
NSUN2
STAM
NNAT
BLCAP
TSNAX
FARSB
SKP1
TLE6
PES1
LYRM4
FARS2
SLC35B1
TSN
UPF2
NDUFA4
ZNF576
IRGQ
ACTR10
PAK1IP1
C6orf52
PNO1
CAPRIN1
RBBP5
DPH6
PSMD12
COX7A2L
GOLGA5
RPL35A
IQCG
TTC8
SART3