ChIP-Atlas: Target genes

Potential target genes for RARA

Query protein: RARA
Distance from TSS: ± 1 kb  ± 5 kb  ± 10 kb
Sort key: SRX014781 | UPR9
 
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  1000 750 500 250 1 0  (Values = Binding scores of MACS2 and STRING)

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Links: Movie and Document for ChIP-Atlas Target Genes
RARA's Target genes

◢ RARA: Average

◢ SRX2748853: Adenoid cystic carcinoma

◢ SRX2748855: Adenoid cystic carcinoma

◢ SRX10442515: BE(2)-C

◢ SRX8814860: BE(2)-C

◢ SRX2635935: Hep G2

◢ SRX2635936: Hep G2

◢ SRX25244558: hESC derived endodermal cells

◢ SRX25244559: hESC derived endodermal cells

◢ SRX25244560: hESC derived endodermal cells

◢ SRX25244561: hESC derived endodermal cells

◢ SRX21236745: IMR-32

◢ SRX21236746: IMR-32

◢ SRX21236747: IMR-32

◢ SRX21236748: IMR-32

◢ SRX3584302: iPSC derived chondrocytes

◢ SRX3584303: iPSC derived chondrocytes

◢ SRX3584304: iPSC derived chondrocytes

◢ SRX3584305: iPSC derived chondrocytes

◢ SRX3584306: iPSC derived chondrocytes

◢ SRX3584307: iPSC derived chondrocytes

◢ SRX3584308: iPSC derived chondrocytes

◢ SRX3584309: iPSC derived chondrocytes

◢ SRX3584310: iPSC derived chondrocytes

◢ SRX3584311: iPSC derived chondrocytes

◢ SRX3584312: iPSC derived chondrocytes

◢ SRX3584313: iPSC derived chondrocytes

◢ SRX6039037: iPSC derived chondrocytes

◢ SRX6039038: iPSC derived chondrocytes

◢ SRX6039039: iPSC derived chondrocytes

◢ SRX6039040: iPSC derived chondrocytes

◢ SRX6039041: iPSC derived chondrocytes

◢ SRX6039042: iPSC derived chondrocytes

◢ SRX3584300: iPS cells

◢ SRX3584301: iPS cells

◢ SRX19662659: Ishikawa

◢ SRX19662660: Ishikawa

◢ SRX4671297: NAMEC8

◢ SRX4671298: NAMEC8

◢ SRX4671299: NAMEC8

◢ SRX014752: NB-4

◢ SRX014770: NB-4

◢ SRX17639399: NB-4

◢ SRX17639400: NB-4

◢ SRX17639401: NB-4

◢ SRX17639402: NB-4

◢ SRX8814876: Neuroblastoma

◢ SRX9607665: NTERA-2

◢ SRX9607666: NTERA-2

◢ SRX1035586: SK-N-SH

◢ SRX1035587: SK-N-SH

◢ SRX1035588: SK-N-SH

◢ SRX1035589: SK-N-SH

◢ SRX4671312: SUM 159PT

◢ SRX4671313: SUM 159PT

◢ SRX4671314: SUM 159PT

◢ SRX19662634: T-47D

◢ SRX19662636: T-47D

◢ SRX682379: TSU-1621MT

◣ SRX014781: UPR9

◢ SRX014782: UPR9

◢ RARA: STRING

DUX4
KIF5C
MTRNR2L1
TRIM48
MAMDC2
MTRNR2L2
MSH3
DHFR
MTRNR2L10
MTRNR2L8
ISG15
AGRN
MTRNR2L9
MUC3A
LOC102724770
DGCR6
ZNF335
RABL2B
RABL2A
PSMD1
RWDD1
MAPKAPK5
TAOK3
SUDS3
NME6
NUP85
CACTIN
POLR3F
DZANK1
FRG2C
FAM187A
EFTUD2
CCDC103
NVL
IPO13
DYNC1LI2
POLR2E
GPX4
VDAC2
GOSR2
HSPA9
VTI1B
PSMG2
CEP76
MRPS7
MIF4GD
GGA3
NUP205
HADHB
HADHA
RPL21
REXO1
S1PR4
NCLN
EXOSC5
BCKDHA
C19orf48
TBCK
AIMP1
NNAT
BLCAP
DCTN1
TSNAX
STAM
SLC35B1
ATP5MG
TSN
STAM2
SEC61B
FARSB
PSMD12
LYRM4
FARS2
SRD5A1
NSUN2
PES1
PNO1
PAK1IP1
C6orf52
RBBP5
UPF2
SKP1
NDUFA4
ZNF576
IRGQ
ZNF503
TLE6
COX7A2L
CAPRIN1
SART3
ISCU
ACTR10
RBKS
BABAM2
ZRANB2
DPH6
GOLGA5
TTC8
RPL35A
IQCG
SUPV3L1
VARS1
PI4KB
LMLN
TMED1
RPS23
ATP6AP1L
RPS12
SMC2
MRPS5
ANAPC7
FAM104A
C17orf80
SELENOF
HS2ST1
RABGGTB
PCBP1
USP1
MRPL11
PDAP1
BUD31
HSPA1B
SFI1
EIF4ENIF1
UFM1
ADK
DNAJB7
RPS27A
CLHC1
XPNPEP3
ST13
AP3M1
C6orf47
APOM
ICE1
BAG6
PROSER1
NHLRC3
FRG2
WDR74
STX5
PIP4P1
COMMD1
OSGEP
APEX1
CCT4
SF3B3
COG4
PAF1
MED29
TM9SF1
IPO4
RPS29
NEUROG2
TSSK4
NFKBIL1
DDX39B
ATP6V1G2
ZGPAT
ARFRP1
PPP1R1B
ARL4D
CCDC200
LRR1
NEUROG3
PDE6B
HES1
HOXA3
RARB
ZNF608
PIN4
OR6B2
NDUFA10
PTGES2
UBE2I
OAZ3
SUCLG1
ARF1
PDE12
ICMT
HES3
HOXA4
WNT1
EAPP
HOXA1
ID1
DUSP29
SOAT2
IGFBP6
ARHGAP11A-SCG5
ARHGAP11A
TAF9
RAD17
AK6
CDX2
NOTCH2NLC
STK36
RNF25
MRTO4
EMC1
SKIL
MBTPS1
DHRS3
LARP7
RARA
GLRA1
BICRA
SP2
ARID3B
VEZT
FGD6
SNAPC1
FZD8
CYP26A1
UNKL
NOTCH2
SPATC1L
SEC11C
RPL7
RDH10
ID2
ARHGAP10
EIF2S3
GADD45GIP1
CDC73
SYBU
C16orf91
NR2F1
PLAGL1
NFE2
G6PC2
PMAIP1
CCDC33
IER3
FLOT1
HOXA2
PALM2AKAP2
CBFA2T2
PDE4DIP
GORAB
DUSP6
RPN1
MUC20
H2BU1
H2AW
ZNF775
TMEM107
NEUROD1
NDUFS7
GTF3C4
DDX31
ZP4
SERINC5
ZSWIM1
SPATA25
NEURL2
CTSA
SH2B1
KCNN4
NEUROG1
ATOH1
RAB11FIP1
CNPY2
DPP9
IGFBP2
LZTS1
TLE4
KAT6B
BNIP3
TBL2
USP29
ZFHX4
SEC22B
TPM1
ERCC1
TRIM65
GPR108
LEFTY2
ZNF585B
ZNF383
BBS9
BHLHE40
LBX1
TRIP10
CDH18
MRPL38
TLE3
PCGF1
PDHX
APIP
DDAH1
FOXP1
ERRFI1
PHOX2B
SPCS1
GLT8D1
VSIR
AQP6
HOXB1
METTL24
NBAS
TTI2
RUNX1T1
LBX2
ARHGDIA
ST18
LIN28A
TBX3
HOXA5
INSM1
P4HB
TLE2
ZNF746
ETS1
PHC2
PPP1R35
MLEC
CDCA7L
ASB2
PCBD2
FAM222A
TEPSIN
NDUFAF8
LPIN1
NBEAL2
CCDC12
ARHGAP24
FGF19
ADAM18
DAPL1
ANKLE2
DNM2
TPRA1
PAH
ARID3C
TBX2
ALKBH5
COL23A1
NCOA7
NHS
TAF12
CITED2
HOXB3
RHBDD3
EWSR1
S100A10
SLC39A7
RXRB
HSD17B8
ADNP2
DLL4
PPP6R3
HOXC4
CRYAA2
CRYAA
SP1
PRUNE2
FBXO31
URM1
SYTL3
HPD
MINDY2
SP5
CS
FILIP1L
EXOC2
HUS1
MAP1LC3B
TMEM70
ELOC
DCTN3
H2BC17
H2AC17
CCN1
ANKRD28
UNCX
FRA10AC1
COL11A2
RPS10-NUDT3
RPS10
SYNPO
AXDND1
SMAD3
HPCAL1
PDHB
CNTN1
ANK2
NFIA
ZFHX3
KIF21B
PKDCC
CLGN
BAZ2A
ARSG
RPL22
RNF207
FXYD2
XKR7
DLX4
FABP7
STX18
NPAS4
E4F1
CAMTA1
RAB5B
PMEL
CDK2
PPFIBP2
ID3
ITGB6
CHN2
STAP2
CRABP2
TLE1
TNFRSF19
ARHGEF28
TMEM242
MRPL34
DDA1
ABHD8
HOXC6
PDE4D
CPVL
DOLPP1
OTUD7B
KDM6B
ASB6
BAIAP2
KANSL3
FER1L5
ARRDC4
KDM2B
GPC6
PGK1
TMEM120B
SEPTIN9
DONSON
ABLIM3
VIP
UPF3A
DYNLT1
ETAA1
ATP5F1B
FOXP2
MAB21L2
POR
ATF6
FRYL
MSX1
CERCAM
SMPDL3A
POP5
JUP
PDZRN3
SH3BP2
ARHGAP22
NELFA
PRRX1
CADM3
PC
CERK
EXOSC4
KATNB1
RBPJ
RPS24
POLR3A
KCNAB2
BCL3
MRPL20
MYLK4
PANK2
PPCDC
TRIB1
NINJ2
MEIS2
RARG
PTK2B
BMF
CCDC174
IRF2BP2
FAM72C
RHBDD1
SNX16
SQSTM1
CLCN3
TMEM101
CCNL2
MBNL3
ABHD2
SREBF1
GPCPD1
QPRT
SRSF11
ADAP1
RING1
SMARCD2
GATA4
SIRT4
NOTCH2NLB
NOTCH2NLA
MFSD10
MTMR4
MALRD1
PRKAG2
MIDEAS
ELOVL5
TOP2A
ABCC10
HEXIM2
TMEM9
SLX1B
SLX1A
LFNG
BOLA2B
BOLA2
ZNF687
SMG6
ZNF718
ZNF595
NBPF1
ZNF367
ZFP36
PLEKHG2
SACM1L
USP17L21
USP17L20
USP17L12
PSMB3
PCGF2
SLC2A9
CNOT2
TRIM46
KRTCAP2
RASSF5
NRL
ATP1A1
NOL4L
CALM2
USP17L22
FURIN
MRPL3
HNRNPA2B1
CBX3
SPG7
KAT7
RNF34
HSPA1L
HSPA1A
SLC35E3
PCNA
RABGAP1L
MRPS31
EIF1B
CBX5
INHBE
GLI1
ANGPTL4
PSPN
ALKBH7
DACT2
RPL34
TLX2
ECEL1
DLC1
ASXL3
PPP1R18
NRM
SMIM28
RFX1
SOCS3
LRRC40
KAZALD1
ITGAV
C9orf92
ARHGAP30
THOP1
SGTA
POLDIP3
NUBP1
HNMT
NFKBIA
RHOQ
ATP6V1E2
TRAF7
EIF2AK3
FAM72D
ZFAND2A
STIP1
GTF3A
NAV3
OSBP
SHC1
GRIK2
STAT1
PRDM10
RNF103-CHMP3
RMND5A
RPS7
ASCL1
DNAH1
IL17RD
ZNF77
SKI
ZNF740
DCAF11
CSAD
SHF
TRIM7
ATP1B1
MYBPC3
PSMD6
LRATD2
RAB26
SSBP4
RPLP1
STARD13
TRIM26
CLDN11
HAND1
KNL1
ARRDC2
CDS2
IQSEC3
GADD45G
SEPTIN4
GPR20
ZC3H3
SOD2
TRIM41
SERPINE1
ME3
ACYP1
PXYLP1
NR2F6
AHDC1
BRMS1
RBBP7
GADD45A
MDM2
GOT1
ECE1
HOXB4
SLC45A4
CCL26
RAB37
KMT5A
BORCS6
LPCAT3
HMGCS1
CAPNS2
AGO1
IKBKB
USP17L5
USP17L30
USP17L29
USP17L28
USP17L27
USP17L26
USP17L25
USP17L24
CAPG
KDM8
TNFAIP2
SLC34A3
ZNF285
RGS3
CSF3R
DLG2
TCP10L
SPRED2
NLK
EMP3
SMIM20
TRIB3
POLG
TPCN1
ZNF564
CBX4
RGS12
LMOD1
ANKHD1-EIF4EBP3
ANKHD1
STX1A
RTN4
FTL
PDP2
LMO4
NCOA2
BAHCC1
ART1
TCTEX1D4
PLK3
BTBD19
RAB11B
G3BP1
SOCS2
ADM
SCGB1A1
COL21A1
B4GAT1
LIG3
MYRIP
GLRX5
MACROH2A1
EVA1A
SLC35E2B
GRSF1
SH2D6
ZNF827
DSCAML1
CRLS1
MBD6
DDIT3
SLC7A5
ZC2HC1C
RBFOX2
HTR1F
NEK1
TCF7L2
METRN
FAM107B
HNRNPD
SYNJ2
MYEOV
KBTBD11
MNT
MSX2
SCHIP1
CORO1A
HOXD3
ELL
TMEM94
BFSP1
MOB3A
IZUMO4
RBM15
NHLRC1
PNKD
GMEB2
METTL11B
MIDN
ARHGEF3
IFI16
JUNB
CNPY3
METTL3
MTF2
FST
PKN2
SIT1
CCDC43
PRMT5
KDM3A
ANTKMT
CNKSR3
DAGLB
UBE2F
PLA2G2A
CTSW
EIF3D
WSB2
TMEM212
INAVA
RFX2
UNC5A
LCK
FAM167B
NKD1
ARID5A
NEK3
CPSF4L
ETF1
CSNK1D
MPND
SORL1
MRS2
SHB
BCAR3
SLC25A25
SLC6A12
CLDN9
PYGL
IGFBP7
TESC
SLC19A1
NCDN
KIAA0319L
KIAA1549
MRPS28
FGR
UBC
PPFIBP1
NKX1-1
TXNRD1
SCARB1
ZBTB18
SH3BP1
INKA2
CMSS1
ARID2
LRRC45
CENPX
NAGLU
TACC1
SLC30A4
LINGO1
PLEC
TUBA1C
KLF16
CYP51A1
ARAP1
PCM1
MMD
ATP6V1G3
ABCA4
TLN1
CREB3
CHODL
HNRNPL
H3C12
COX5A
SH3YL1
ACP1
METTL26
SORBS2
SPOCK2
PGP
ARID4A
RNPEPL1
DUSP28
ANKMY1
H4C14
H3C15
H3C14
LOC102724265
SEC14L1
NCS1
DMD
PIPOX
MYO1B
LNPEP
FRMD3
UGP2
FOXA3
SCNN1A
LTBR
CCDC107
ARHGEF39
NRXN1
NR1D1
EIF4H
RNF149
HMGB1
ITGB2
CAND1
LIMA1
RPS6KA1
UACA
NAA10
ARHGAP4
KMT2A
TRIM2
KIF3B
NAV2
CSRNP1
STIL
SLA
TRDMT1
EVI5L
RNF144A
BOLA2-SMG1P6
ANKRD39
KIAA0319
IL23R
STX16
PHB
CPT1A
ALOX5AP
PRR14
FBRS
DMBX1
ARHGEF10L
OTX1
NRCAM
INAFM2
FRAT2
HNRNPAB
RIMKLB
METTL25
CREB5
CCDC59
RGS5
TCHP
LMNA
SMIM11B
SMIM11A
SMUG1
MRPS24
C5orf63
NPR1
ILF2
RXRA
RNF166
GATD3B
GATD3A
CTU2
TEDC1
CEP41
DNAJB3
ETFBKMT
DMRT3
BAX
LAPTM5
CIC
CCDC38
AMDHD1
SNCG
MMRN2
PRKACA
TDRKH
HTR5A
MBD2
TDG
DIABLO
C12orf73
TMCO6
NEDD9
ZBTB45
TRABD2B
PSMB5
PCTP
GATA6
CACNA1D
DRD4
IQGAP2
IRF2
SDF4
LTBP3
B3GALT6
OPLAH
PYDC5
RCC2
PHRF1
HOXC5
ING1
CARS2
NOXO1
GPT2
RAC1
HIP1
MVB12A
CXXC5
NKIRAS1
GCHFR
PHETA1
BCL2L1
SLC27A5
NAIF1
HSPA6
CD79A
TRIM24
NDUFV2
SEBOX
CHGA
LAMA4
TXNDC11
DUSP1
LUC7L2
ZFHX2
ZNF414
SERPINF2
FAM72A
EVPL
BZW2
VOPP1
ERLIN2
DTX4
LYST
KCTD7
BRICD5
PCLAF
ZNF219
TMEM253
LEKR1
ZNF76
CCND3
GGCT
TUBGCP3
EEF1AKMT4-ECE2
EEF1AKMT4
ALG3
WTAP
CEP85L
FGGY
ARL8A
SMIM22
ROGDI
MPZL1
CR1L
HAUS5