ChIP-Atlas: Target genes

Potential target genes for RARA

Query protein: RARA
Distance from TSS: ± 1 kb  ± 5 kb  ± 10 kb
Sort key: SRX4671297 | NAMEC8
 
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  1000 750 500 250 1 0  (Values = Binding scores of MACS2 and STRING)

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Links: Movie and Document for ChIP-Atlas Target Genes
RARA's Target genes

◢ RARA: Average

◢ SRX2748853: Adenoid cystic carcinoma

◢ SRX2748855: Adenoid cystic carcinoma

◢ SRX10442515: BE(2)-C

◢ SRX8814860: BE(2)-C

◢ SRX2635935: Hep G2

◢ SRX2635936: Hep G2

◢ SRX25244558: hESC derived endodermal cells

◢ SRX25244559: hESC derived endodermal cells

◢ SRX25244560: hESC derived endodermal cells

◢ SRX25244561: hESC derived endodermal cells

◢ SRX21236745: IMR-32

◢ SRX21236746: IMR-32

◢ SRX21236747: IMR-32

◢ SRX21236748: IMR-32

◢ SRX3584302: iPSC derived chondrocytes

◢ SRX3584303: iPSC derived chondrocytes

◢ SRX3584304: iPSC derived chondrocytes

◢ SRX3584305: iPSC derived chondrocytes

◢ SRX3584306: iPSC derived chondrocytes

◢ SRX3584307: iPSC derived chondrocytes

◢ SRX3584308: iPSC derived chondrocytes

◢ SRX3584309: iPSC derived chondrocytes

◢ SRX3584310: iPSC derived chondrocytes

◢ SRX3584311: iPSC derived chondrocytes

◢ SRX3584312: iPSC derived chondrocytes

◢ SRX3584313: iPSC derived chondrocytes

◢ SRX6039037: iPSC derived chondrocytes

◢ SRX6039038: iPSC derived chondrocytes

◢ SRX6039039: iPSC derived chondrocytes

◢ SRX6039040: iPSC derived chondrocytes

◢ SRX6039041: iPSC derived chondrocytes

◢ SRX6039042: iPSC derived chondrocytes

◢ SRX3584300: iPS cells

◢ SRX3584301: iPS cells

◢ SRX19662659: Ishikawa

◢ SRX19662660: Ishikawa

◣ SRX4671297: NAMEC8

◢ SRX4671298: NAMEC8

◢ SRX4671299: NAMEC8

◢ SRX014752: NB-4

◢ SRX014770: NB-4

◢ SRX17639399: NB-4

◢ SRX17639400: NB-4

◢ SRX17639401: NB-4

◢ SRX17639402: NB-4

◢ SRX8814876: Neuroblastoma

◢ SRX9607665: NTERA-2

◢ SRX9607666: NTERA-2

◢ SRX1035586: SK-N-SH

◢ SRX1035587: SK-N-SH

◢ SRX1035588: SK-N-SH

◢ SRX1035589: SK-N-SH

◢ SRX4671312: SUM 159PT

◢ SRX4671313: SUM 159PT

◢ SRX4671314: SUM 159PT

◢ SRX19662634: T-47D

◢ SRX19662636: T-47D

◢ SRX682379: TSU-1621MT

◢ SRX014781: UPR9

◢ SRX014782: UPR9

◢ RARA: STRING

WDR74
STX5
MTRNR2L1
ID1
MAMDC2
LAMA5
DUX4
EAPP
ZGPAT
ARFRP1
TGM2
IER3
FLOT1
SOAT2
IGFBP6
BHLHE40
MTRNR2L2
MSH3
DHFR
BIN1
SNX16
ABCC10
KNL1
ANGPTL4
ABLIM3
SERPINE1
SNAPC1
TMEM107
VSIR
SHF
MYEOV
ERCC1
POLDIP3
TTI2
HSPA6
ITGB2
ITGA5
LTBP3
MIDEAS
IL32
CSF3
PDE12
NOL4L
TRIB1
PLEKHA7
FOXS1
GSTA4
ADAMTS9
ARID3B
TAF12
BORCS6
TRIM7
HIF3A
PRKAG2
GPR39
POLG
PARP16
COL1A1
POLR3E
SIT1
CCDC107
ARHGEF39
ZSWIM1
SPATA25
NEURL2
CTSA
KIF2C
TNS4
UPP1
NEMF
USP2
ACYP1
ZC2HC1C
PRMT5
PIKFYVE
STX16
DPP9
VGLL4
TTPAL
SCNN1A
LTBR
DUSP1
SMAD3
GDF5
FRG2C
PPP6R3
TSPAN4
POLR2L
TCTEX1D4
PLK3
BTBD19
CSNK1D
CDKN1A
LOC102724770
DGCR6
B4GALT1
PARD6B
MEAK7
H4C8
RGS3
RPS29
HES7
ALOXE3
LTA4H
NDUFS7
SH2B1
MPZL1
TRIM41
C8orf37
RXRA
SACM1L
RAB11A
LOC100130520
CD300H
C17orf77
TRIOBP
PDXK
ZNF184
PSMA3
MTRNR2L8
PLXDC1
SLC35E2B
BCL2L1
CLCF1
EREG
PRR7
ZNF367
WNT9A
MNT
FHL2
SIRT4
TMCO6
LUC7L2
FMC1-LUC7L2
FMC1
CD14
KLRC3
CCND3
TAF8
PTGIS
STX1A
PDE4DIP
NFKBIA
MDM4
SLC37A2
JUNB
ALLC
CCDC88B
PHC2
BRMS1
B4GAT1
HMGN4
SH3BP4
GPRC5A
TINAGL1
ART1
IL6ST
SLCO4A1
SYT8
OR6S1
VASN
ACSL1
TRIM55
CCL20
H4C3
H1-6
TRIM16L
FOXO3B
C11orf86
ANK1
IL34
CLDND1
SLC34A3
NPR1
ILF2
RNF224
RNF208
CYSRT1
SMTN
BCAR1
ALAS1
WNT7B
DDIT4
MED16
FRG2
PTPN6
C12orf57
NDST1
MXD4
LIPM
FOXP1
LAPTM5
H4C12
H4C11
H2BC15
H2AC15
PKM
ATP13A2
MUC5AC
RNASE4
ANG
BCL3
APOL6
PPL
PSCA
SMIM3
NUF2
NIBAN2
MFSD10
WSB2
KLF9
UBC
CRTC1
LY6K
H2BC17
H2AC17
OR2B2
PARP2
CCNB1IP1
LCA5
SCAND1
CARD10
MICALCL
PC
EPM2A
FBXO46
MRPL33
AMOTL2
ASB2
OR1F1
FCGR3A
RDH5
CD63
RALGDS
KANK2
N4BP2
ENAH
IGF2BP3
MAP1LC3B2
RARA
SKI
ZBED9
PHLDB2
CTSD
SYS1
SLC41A3
PSMB3
PCGF2
ITGB5
ABHD2
DLC1
ELOVL6
BCL7A
CCN5
NCOA7
NRP1
TCF7
SNX8
CCDC200
TAF9
RAD17
AK6
STX10
IER2
VAMP2
PER1
LOC100509620
NAA38
DTNB
AJUBA
CHD3
KRT31
HMGA1
PMEPA1
ITGA3
SMIM29
SEPTIN9
TTC39C
METRNL
H4C14
H3C15
H3C14
H2AC19
H2AC18
H4C15
NADK
ADSS1
FOSL1
ALOX5AP
NEDD4L
SH3GL1
CSRP1
LYPLA2
GALE
TMEM40
METTL26
WFIKKN1
MCRIP2
TAGLN2
H2BC14
H2AC14
GIP
ANXA11
EPB41L1
KLHL30
RHOB
C3
SPAAR
HRCT1
GFOD1
MYC
S100A2
TNNI2
ZFAND3
TNK2
TRAM2
TIMP2
DUSP10
IL20RB
SEC22B
ARID3A
CETP
OSBPL3
MRPS10
SQSTM1
SREBF1
NID2
TNFRSF6B
POLR2E
GPX4
RARG
CDC42EP1
JPH2
ARHGAP22
MT2A
NQO1
RGS2
KCNMA1
TANK
OMP
NFIC
SLC22A18
HOGA1
ANKRD2
KYAT1
MAP3K14
GOLGA1
VPS26C
ARIH2
EIF4A3
C19orf33
FITM2
ANPEP
MCHR1
H3C6
H2BC8
H2AC8
KANK4
TENT5B
BNC1
OR2T1
RIN1
ZG16B
TES
ARL6IP1
ZC3H12A
TMEM184A
STN1
TMEM259
CNN2
NIPAL4
HM13
NPIPA8
PLAU
CDK5RAP1
IRF2BP2
LDLR
FBXO31
MAP1LC3B
MLLT1
CLDN4
TOR2A
AGFG2
FLYWCH1
RNF223
ANXA5
PRSS38
UQCRHL
LTBP1
SLC45A4
EXOSC6
UBE2H
FASN
H3C4
H4C4
H2BC6
NT5DC3
SBNO2
CDK13
CPA4
PNPLA3
IP6K3
PECAM1
ZNF335
RABL2B
RABL2A
PSMD1
RWDD1
MAPKAPK5
TAOK3
SUDS3
NME6
NUP85
CACTIN
POLR3F
DZANK1
FAM187A
EFTUD2
CCDC103
NVL
IPO13
DYNC1LI2
VDAC2
GOSR2
HSPA9
VTI1B
PSMG2
CEP76
MRPS7
MIF4GD
GGA3
NUP205
HADHB
HADHA
RPL21
REXO1
S1PR4
NCLN
EXOSC5
BCKDHA
C19orf48
TBCK
AIMP1
NNAT
BLCAP
DCTN1
TSNAX
STAM
SLC35B1
ATP5MG
TSN
STAM2
SEC61B
FARSB
PSMD12
LYRM4
FARS2
SRD5A1
NSUN2
PES1
PNO1
PAK1IP1
C6orf52
RBBP5
UPF2
SKP1
NDUFA4
ZNF576
IRGQ
ZNF503
TLE6
COX7A2L
CAPRIN1
SART3
ISCU
ACTR10
RBKS
BABAM2
ZRANB2
DPH6
GOLGA5
TTC8
RPL35A
IQCG
SUPV3L1
VARS1
PI4KB
LMLN
TMED1
RPS23
ATP6AP1L
RPS12
SMC2
MRPS5
ANAPC7
FAM104A
C17orf80
SELENOF
HS2ST1
RABGGTB
PCBP1
USP1
MRPL11
PDAP1
BUD31
HSPA1B
SFI1
EIF4ENIF1
UFM1
ADK
DNAJB7
RPS27A
CLHC1
XPNPEP3
ST13
AP3M1
C6orf47
APOM
ICE1
BAG6
PROSER1
NHLRC3
PIP4P1
COMMD1
OSGEP
APEX1
CCT4
SF3B3
COG4
PAF1
MED29
TM9SF1
IPO4
NEUROG2
TSSK4
NFKBIL1
DDX39B
ATP6V1G2
PPP1R1B
ARL4D
LRR1
NEUROG3
PDE6B
HES1
HOXA3
RARB
ZNF608
PIN4
OR6B2
NDUFA10
PTGES2
UBE2I
OAZ3
SUCLG1
ARF1
ICMT
HES3
HOXA4
WNT1
HOXA1
DUSP29
ARHGAP11A-SCG5
ARHGAP11A
CDX2
NOTCH2NLC
STK36
RNF25
MRTO4
EMC1
SKIL
MBTPS1
DHRS3
LARP7
GLRA1
BICRA
SP2
VEZT
FGD6
FZD8
CYP26A1
UNKL
NOTCH2
SPATC1L
SEC11C
RPL7
RDH10
ID2
ARHGAP10
EIF2S3
GADD45GIP1
CDC73
SYBU
C16orf91
NR2F1
PLAGL1
NFE2
G6PC2
PMAIP1
CCDC33
HOXA2
PALM2AKAP2
CBFA2T2
GORAB
DUSP6
RPN1
MUC20
H2BU1
H2AW
ZNF775
NEUROD1
GTF3C4
DDX31
ZP4
SERINC5
KCNN4
NEUROG1
ATOH1
RAB11FIP1
CNPY2
IGFBP2
LZTS1
TLE4
KAT6B
BNIP3
TBL2
USP29
ZFHX4
TPM1
TRIM65
GPR108
LEFTY2
ZNF585B
ZNF383
BBS9
LBX1
TRIP10
CDH18
MRPL38
TLE3
PCGF1
PDHX
APIP
DDAH1
ERRFI1
PHOX2B
SPCS1
GLT8D1
AQP6
HOXB1
METTL24
NBAS
RUNX1T1
LBX2
ARHGDIA
ST18
LIN28A
TBX3
HOXA5
INSM1
P4HB
TLE2
ZNF746
ETS1
PPP1R35
MLEC
CDCA7L
PCBD2
FAM222A
TEPSIN
NDUFAF8
LPIN1
NBEAL2
CCDC12
ARHGAP24
FGF19
ADAM18
DAPL1
ANKLE2
DNM2
TPRA1
PAH
ARID3C
TBX2
ALKBH5
COL23A1
NHS
CITED2
HOXB3
RHBDD3
EWSR1
S100A10
SLC39A7
RXRB
HSD17B8
ADNP2
DLL4
HOXC4
CRYAA2
CRYAA
SP1
PRUNE2
URM1
SYTL3
HPD
MINDY2
SP5
CS
FILIP1L
EXOC2
HUS1
TMEM70
ELOC
DCTN3
CCN1
ANKRD28
UNCX
FRA10AC1
COL11A2
RPS10-NUDT3
RPS10
SYNPO
AXDND1
HPCAL1
PDHB
CNTN1
ANK2
NFIA
ZFHX3
KIF21B
PKDCC
CLGN
BAZ2A
ARSG
RPL22
RNF207
FXYD2
XKR7
DLX4
FABP7
STX18
NPAS4
E4F1
CAMTA1
RAB5B
PMEL
CDK2
PPFIBP2
ID3
ITGB6
CHN2
STAP2
CRABP2
TLE1
TNFRSF19
ARHGEF28
TMEM242
MRPL34
DDA1
ABHD8
HOXC6
PDE4D
CPVL
DOLPP1
OTUD7B
KDM6B
ASB6
BAIAP2
KANSL3
FER1L5
ARRDC4
KDM2B
GPC6
PGK1
TMEM120B
DONSON
VIP
UPF3A
DYNLT1
ETAA1
ATP5F1B
FOXP2
MAB21L2
POR
ATF6
FRYL
MSX1
CERCAM
SMPDL3A
POP5
JUP
PDZRN3
SH3BP2
NELFA
PRRX1
CADM3
CERK
EXOSC4
KATNB1
RBPJ
RPS24
POLR3A
KCNAB2
MRPL20
MYLK4
PANK2
PPCDC
NINJ2
MEIS2
PTK2B
BMF
CCDC174
FAM72C
RHBDD1
CLCN3
TMEM101
CCNL2
MBNL3
GPCPD1
QPRT
SRSF11
ADAP1
RING1
SMARCD2
GATA4
NOTCH2NLB
NOTCH2NLA
MTMR4
MALRD1
ELOVL5
TOP2A
HEXIM2
TMEM9
SLX1B
SLX1A
LFNG
BOLA2B
BOLA2
ZNF687
SMG6
ZNF718
ZNF595
NBPF1
ZFP36
PLEKHG2
USP17L21
USP17L20
USP17L12
SLC2A9
CNOT2
TRIM46
KRTCAP2
RASSF5
NRL
ATP1A1
CALM2
USP17L22
FURIN
MUC3A
MRPL3
HNRNPA2B1
CBX3
SPG7
KAT7
RNF34
HSPA1L
HSPA1A
SLC35E3
PCNA
RABGAP1L
MRPS31
EIF1B
CBX5
INHBE
GLI1
PSPN
ALKBH7
DACT2
RPL34
TLX2
ECEL1
ASXL3
PPP1R18
NRM
SMIM28
RFX1
SOCS3
LRRC40
KAZALD1
ITGAV
C9orf92
ARHGAP30
THOP1
SGTA
NUBP1
HNMT
RHOQ
ATP6V1E2
TRAF7
EIF2AK3
FAM72D
ZFAND2A
STIP1
GTF3A
NAV3
OSBP
SHC1
GRIK2
STAT1
PRDM10
RNF103-CHMP3
RMND5A
RPS7
ASCL1
DNAH1
IL17RD
ZNF77
ZNF740
DCAF11
CSAD
ATP1B1
MYBPC3
PSMD6
LRATD2
RAB26
SSBP4
RPLP1
STARD13
TRIM26
CLDN11
HAND1
ARRDC2
CDS2
IQSEC3
GADD45G
SEPTIN4
GPR20
ZC3H3
SOD2
ME3
PXYLP1
NR2F6
AHDC1
RBBP7
GADD45A
MDM2
GOT1
ECE1
HOXB4
CCL26
RAB37
KMT5A
LPCAT3
HMGCS1
CAPNS2
AGO1
IKBKB
USP17L5
USP17L30
USP17L29
USP17L28
USP17L27
USP17L26
USP17L25
USP17L24
CAPG
KDM8
TNFAIP2
ZNF285
CSF3R
DLG2
TCP10L
SPRED2
NLK
EMP3
SMIM20
TRIB3
TPCN1
ZNF564
CBX4
RGS12
LMOD1
ANKHD1-EIF4EBP3
ANKHD1
RTN4
FTL
PDP2
LMO4
NCOA2
BAHCC1
RAB11B
G3BP1
SOCS2
ADM
SCGB1A1
COL21A1
LIG3
MYRIP
GLRX5
MACROH2A1
EVA1A