ChIP-Atlas: Target genes

Potential target genes for RARA

Query protein: RARA
Distance from TSS: ± 1 kb  ± 5 kb  ± 10 kb
Sort key: SRX9607666 | NTERA-2
 
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  1000 750 500 250 1 0  (Values = Binding scores of MACS2 and STRING)

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Links: Movie and Document for ChIP-Atlas Target Genes
RARA's Target genes

◢ RARA: Average

◢ SRX2748853: Adenoid cystic carcinoma

◢ SRX2748855: Adenoid cystic carcinoma

◢ SRX10442515: BE(2)-C

◢ SRX8814860: BE(2)-C

◢ SRX2635935: Hep G2

◢ SRX2635936: Hep G2

◢ SRX25244558: hESC derived endodermal cells

◢ SRX25244559: hESC derived endodermal cells

◢ SRX25244560: hESC derived endodermal cells

◢ SRX25244561: hESC derived endodermal cells

◢ SRX21236745: IMR-32

◢ SRX21236746: IMR-32

◢ SRX21236747: IMR-32

◢ SRX21236748: IMR-32

◢ SRX3584302: iPSC derived chondrocytes

◢ SRX3584303: iPSC derived chondrocytes

◢ SRX3584304: iPSC derived chondrocytes

◢ SRX3584305: iPSC derived chondrocytes

◢ SRX3584306: iPSC derived chondrocytes

◢ SRX3584307: iPSC derived chondrocytes

◢ SRX3584308: iPSC derived chondrocytes

◢ SRX3584309: iPSC derived chondrocytes

◢ SRX3584310: iPSC derived chondrocytes

◢ SRX3584311: iPSC derived chondrocytes

◢ SRX3584312: iPSC derived chondrocytes

◢ SRX3584313: iPSC derived chondrocytes

◢ SRX6039037: iPSC derived chondrocytes

◢ SRX6039038: iPSC derived chondrocytes

◢ SRX6039039: iPSC derived chondrocytes

◢ SRX6039040: iPSC derived chondrocytes

◢ SRX6039041: iPSC derived chondrocytes

◢ SRX6039042: iPSC derived chondrocytes

◢ SRX3584300: iPS cells

◢ SRX3584301: iPS cells

◢ SRX19662659: Ishikawa

◢ SRX19662660: Ishikawa

◢ SRX4671297: NAMEC8

◢ SRX4671298: NAMEC8

◢ SRX4671299: NAMEC8

◢ SRX014752: NB-4

◢ SRX014770: NB-4

◢ SRX17639399: NB-4

◢ SRX17639400: NB-4

◢ SRX17639401: NB-4

◢ SRX17639402: NB-4

◢ SRX8814876: Neuroblastoma

◢ SRX9607665: NTERA-2

◣ SRX9607666: NTERA-2

◢ SRX1035586: SK-N-SH

◢ SRX1035587: SK-N-SH

◢ SRX1035588: SK-N-SH

◢ SRX1035589: SK-N-SH

◢ SRX4671312: SUM 159PT

◢ SRX4671313: SUM 159PT

◢ SRX4671314: SUM 159PT

◢ SRX19662634: T-47D

◢ SRX19662636: T-47D

◢ SRX682379: TSU-1621MT

◢ SRX014781: UPR9

◢ SRX014782: UPR9

◢ RARA: STRING

H2BU1
H2AW
ADCY1
GPR35
DRD4
ZGPAT
ARFRP1
ARHGAP30
VIPR2
SOAT2
IGFBP6
CRYAA2
CRYAA
CARM1
LINGO4
VPS4A
DYSF
CLEC4G
MUC20
TRABD
ATP6V1B1
OTP
LMOD1
KIF21B
RFLNA
MAMDC2
MAP3K6
FCN3
NR2F6
ELMO3
PRSS47
LFNG
CYP1A1
FOXK1
KCNJ4
PLEKHN1
PERM1
GALP
CRLF1
TMEM59L
DUX4
SLC16A8
NFKBID
PDCD1
KLF16
LTBP3
TMEM250
EXOC2
LINGO1
LRRC20
CYP26A1
SPIB
MLPH
SH3D21
RPS6KA4
HPD
CDX1
LDB3
CLEC18B
GJB6
SCARB1
PLEKHA6
BIRC7
IGFBP5
ZNF746
AGO1
SFXN3
PDZD7
TCTEX1D4
PLK3
BTBD19
CDKN2C
NAT8L
SERPINF2
MYBPC3
SPN
INHBE
GLI1
EVA1C
PHC2
CCDC120
SH3BP2
MCOLN1
PNPLA6
ADGRA2
RASSF7
LMNTD2
NODAL
TRIM46
KRTCAP2
DAPK2
MSLN
MAPK15
FOXL2NB
FOXL2
CATSPER4
WIZ
SSBP4
TRMT112
PRDX5
BAHCC1
LEFTY2
INPP5B
STUB1
RHBDL1
RHOT2
TYROBP
HCST
GET3
BEST2
SH3BP4
METTL11B
PSMG3
SSTR5
HOXB1
C22orf31
BHLHA15
MYL10
ITGB2
FAM207A
TMEM88B
VWA1
POLD1
SERPINB9
ADAMTSL5
STAB1
ZNF79
KMT5C
METTL26
WFIKKN1
RIPOR1
KRTAP12-1
NAPSA
TIMM22
NXN
SKIL
GABRB2
ARHGAP33
ZBTB46
CADPS
COL4A2-AS2
SLC39A7
RXRB
HSD17B8
COL11A2
PKDCC
SPRYD3
ERCC1
TNFRSF6B
TPPP3
KCNQ4
PLD2
DNAJB5
TTYH3
KCNJ10
CCL26
SHANK2
ARRB1
ROBO3
NUP93
PAX7
LAPTM5
ADAM11
C7orf33
BMF
PPP1R14B
PLCB3
N4BP3
MDM2
SDF4
B3GALT6
C1QTNF12
RCC1
TMEM63A
PDE6B
CPLX1
FBXO41
EGR4
ZBTB38
HTR6
PCGF1
TLX2
UBALD2
RASGRP2
PYGM
SLC19A1
SH3PXD2A
TPRA1
RUNX3
CCDC88B
DLX5
FAM222A
LEFTY1
CDK18
EXTL1
SH2B1
COX5A
SMIM35
PCDH1
SOCS3
LAMB2
UNKL
C16orf91
PPP1R35
GPR20
LHX4
FOXA3
KRTAP10-12
PLPP2
NFASC
TRPV4
SERPINB6
NBEAL2
CCDC12
GRWD1
LZTFL1
KCNF1
ADAMTS2
PRELID3B
APOBEC3G
LAMA5
ASB6
TRIM56
CRABP2
RNF224
PTK6
RNF208
CYSRT1
HIRIP3
SCYL1
PSAPL1
ANKRD39
TNNC1
NISCH
SEMA3G
ANKRD23
PDE12
BRI3
JUNB
PRDX2
PDGFA
ATP2A1
SLC6A12
LY6E
KCNN4
TCF20
ZSWIM1
SPATA25
NEURL2
CTSA
CRELD1
DNAH1
YPEL3
TBX6
MEGF8
DIPK1B
SH2D6
GPC6
HDAC4
USP3
SPRED2
ODF3L2
APOBEC3D
APOBEC3C
LOC102724770
DGCR6
CACNA1G
PDE2A
CASD1
GPER1
PMEPA1
SLC12A9
EPHB4
SH2B2
FGF6
SNCG
MMRN2
SYTL1
HS6ST1
BCL7A
RUNX1T1
GALNT2
WHRN
ZNF740
CSAD
METRN
ANTKMT
SERPINE1
DCAF12
RCVRN
CD19
AHSP
PANK2
CRISPLD2
CD7
EVPL
DBH
ARPC1B
LIMK1
SLC26A11
LIF
GPR108
TRIP10
MAP11
LAMTOR4
NGFR
MACF1
FXYD3
TBX10
NUDT8
NUP210L
LSP1
CRYBG2
FBLN2
ATP2B2
RIC8B
MAST3
IL12RB1
ATP6V0A4
PKNOX2
STEAP3
HPDL
GLIS2
FAM110D
MTRNR2L1
SLC2A9
EIF4A2
FGF4
INHBB
PLCB2
KLHL26
PRAM1
CHN2
CPVL
AHDC1
ITM2C
TRABD2A
SLC34A3
AKIRIN1
CBFA2T3
AQP3
SULT1A1
CRIP2
PCBP4
GPR62
MPPED1
CYP26C1
C15orf39
TST
MPST
NBPF15
ZMIZ2
VIL1
SEMA4G
ATF3
TTC7A
MCFD2
NFAM1
SOX1
ACOT4
TRAPPC3
MAP7D1
SH3PXD2B
CEACAM1
PLXNB2
CASKIN1
PFKL
MNX1
ARL8A
TRIL
MAPKAPK2
A4GALT
FAM131B
TCF7
DYRK3
MTSS2
CLEC18A
GAMT
CPB1
FRMD1
KCNN3
PHB2
ANKRD33
ARHGEF16
HOXC4
CAMKK1
KIF19
LHX6
FAM228B
PIK3CG
RIPOR3
SF3B6
TP53I3
TCEA2
TAC4
CARMIL3
USO1
NCS1
MBD2
GATD3B
GATD3A
ADAMTS9
NECTIN4
CCDC22
CACNA1F
CARD14
CDC34
RCOR2
GCK
DPEP2
PRR5
DPEP3
PRR5-ARHGAP8
GBX2
FOXO6
SNX16
ELF3
CITED4
ADAMTSL4
CORO6
CERCAM
YJEFN3
SNED1
GALNT9
ZNF554
SLC22A17
EFS
GAL3ST2
IFNLR1
SDSL
DMPK
SDS
LOC105376731
GRM4
OTOF
FAM166C
CYB5R2
CPE
MXRA8
GPIHBP1
ORMDL3
GSDMB
CTDSP2
RPS8
TRIM8
TAF1C
C1QTNF4
ADAD2
INPP5K
LYST
UCKL1
SLC45A3
RNASEK
MS4A4A
C17orf49
BCL6B
FSCN1
ARRDC2
MIDEAS
OTX1
CIRBP
MMP11
CHCHD10
C22orf15
LMF1
SOX8
TLN1
CREB3
HAPLN3
SPATA31A7
SPATA31A5
TLE6
MINDY2
TRIM48
ADGRA1
SPACA6
SOX5
LARP1
IL24
CNOT2
LDLRAP1
THEM5
RHOC
LITAF
PITPNM2
C16orf95
TCEA3
CEP295NL
RARB
PRTG
ZDHHC19
SLC51A
MYH11
EPHB3
DHDDS
RBKS
BABAM2
GPR162
AP1B1
YWHAE
SIM2
P3H3
PCTP
GUCA2A
COMMD7
KRBA1
SHANK1
CLEC11A
LGR6
TEAD4
SPATS2L
HEY2
SKIDA1
MLLT10
TDRD10
SHE
CFAP20DC
DLL4
DUSP23
OAF
GNB1
LIN28A
ZFHX3
DLC1
MYEOV
LRIG1
WDR18
DONSON
TBC1D14
HECTD4
WBP1L
HOXA1
NR2C1
CPA1
GYPC
POLR2H
CLCN2
MCF2L
CCDC33
NRSN2
ZC3HC1
ATP8B3
LHCGR
MYRF
SULF2
SNX12
ZNF615
ZBED4
PGF
MAB21L4
HUS1
SULT2B1
COX6B2
PPCDC
FGR
PLCH2
RBBP8NL
ANTXRL
THEG
TSPAN31
AGAP2
PMF1-BGLAP
PMF1
MRPS2
C9orf116
MAPK12
HDAC10
PALD1
KCNJ12
KLK7
TLE1
FAM174C
EFNA2
PPM1M
TWF2
MEGF9
APC2
TP53INP1
ANHX
SF3A3
MDK
TIMP3
CRHR2
ANKDD1A
B4GALT1
SVOPL
GAST
FBLN1
CSRNP1
DUSP4
CDC42EP2
CLDN2
R3HCC1
SLC25A6
HEYL
RBP1
NR2C2
CST6
SCN1B
HPN
NPM2
SPATA31A3
KDM6B
DOK7
SNX8
GGT2
SPATA31A1
WNT2B
HAL
UPK3B
BRD2
LOC105372440
ACP4
CD2
CADM3
SLC39A14
PPP1R1A
YIF1B
KCNK6
RGSL1
TBC1D1
B4GALT5
TSPAN18
TRNP1
CHST13
C10orf105
UROC1
SPATA20
ZNF254
PPP2R3A
C17orf113
MTRNR2L2
MSH3
DHFR
CEBPE
BOK
AIFM3
WDR74
STX5
TRIM7
SDE2
CD244
PHRF1
NOP14
GRK4
NFE2
HOXB3
HOXB4
TNFSF15
NRARP
CHD7
HMX3
LOXL1
SOCS2
SPHK2
RPL18
FAM83E
RAB3IL1
RPRM
SPACA4
TTYH2
TBX1
MTRNR2L8
ZFHX2
DGKZ
THRA
SSNA1
ANAPC2
AP5B1
TPRN
OVOL1
FGF16
TNP1
ARHGEF35
CLEC4C
KANSL3
FER1L5
STN1
ASB1
C16orf70
MATN1
SLC25A22
KRT82
CEND1
SLC50A1
EFNA1
HSBP1
EMP2
MYCN
COL9A2
MTA3
UAP1L1
MAN1B1
STX18
ARHGEF3
FAM120B
ZNF593
C1orf232
TEX264
MFSD12
DLL1
KIAA0930
GPR157
SLPI
RCAN1
SEPHS2
ZNF512B
NUP188
DOLK
C1orf167
ANKRD28
DVL3
NES
PPP1R26
DUS1L
COQ10A
ANKRD52
SHH
LRRC3
CXCR5
ELFN2
CYP26B1
C5orf63
ZPR1
APOA5
PPY
HELZ2
PLCD1
DLEC1
MBD6
DDIT3
PTGES3
DAB2IP
PPIA
TREX1
SHISA5
UTS2R
SMYD2
FOXE3
AQP7
MEOX1
OLFML2A
NR6A1
DMAP1
TMPRSS4
INHBA
CHST8
LHX2
COL27A1
BGN
RPRML
CORO2B
DNTT
AURKAIP1
TXNIP
NFIC
APBA2
GDPD5
TTLL10
TTC7B
FTL
LOC102724265
BAX
CYBC1
SMARCD3
SLC7A8
SMIM5
RARA
CDCA7L
GPCPD1
PTPN6
SLC26A6
RAB4B
MSI1
SHISAL2A
KIAA1522
CELSR2
CHRNB3
UPF3A
ADD1
TMEM37
GPSM1
TMEM132B
QPRT
IL17RD
SRCAP
LOC730183
MAP2K3
MYLK3
TRMT9B
VAV2
NKX2-5
CNTFR
FOXP1
ZNF346
MUC3A
LMNA
MEX3A
SBNO2
SLC51B
COL1A1
ADGRL1
TNRC18
LOC100129484
NUDT16L1
EDN3
CXCL17
LIPE
NEFH
PGAP2
HAP1
OLFM4
IGSF21
XKR7
NOL4L
NUF2
PCGF3
RANGAP1
ZC3H7B
MAX
SLC41A1
DLX3
SUSD3
SLC4A2
CDK5
ASIC3
DYRK4
MEX3D
GRIK3
ETV4
EGFL7
GARS1
TMEM39B
USP7
SLC41A3
CCDC149
CYP2D6
FAM155B
RHOF
SETD1B
CYBA
BIRC6
KIF13B
AP3B2
ATP1A3
CTSD
ATP1A4
LGALS2
TIMM13
RAVER1
DUSP2
S100A16
S100A14
CDC25B
MKNK1
MOB3C
NKIRAS2
DNAJC7
SYT15
LOC102724488
MACROH2A2
TRAF7
LPCAT3
PGP
BRICD5
CCND3
INTS10
UQCRHL
MPP2
CLDN9
TTLL6
SEMA7A
CLDN6
CTSZ
FAM3B
TJP3
PRKCZ
DACT3
KLC3
NINJ2
RGS16
SLC2A1
NAALAD2
HRH3
FCHO1
ALDH1L2
CACNA1H
NFAT5
SPECC1L
CRYBA1
ZFHX4
SEMA5B
ALLC
CLIP1
PFKFB4
ZNF710
UCN2
TRH
HSD11B2
FRG2C
PKM
CCDC57
SIPA1
PDE4C
OTOP1
VOPP1
GBA
AFAP1
FGFR1
ATP4A
LOC389199
GSN
CRB2
ATN1
IKZF3
POMGNT1
ENO2
SYTL4
LRMDA
BCL11B
ABCB5
HHIPL1
CCDC85C
MCPH1
VANGL1
SPAG8
HINT2
SERPING1
SSR4
IDH3G
CAPN13
RSPO1
POLR2E
GPX4
ECE1
UFSP1
SRRT
ISCA1
THEM4
GMIP
LPAR2
FBXO31
MAN2C1
PALM
ESCO1
ZIC3
SERTAD2
PIGM
IQSEC2
LSR
USF2
ENTPD8
SERPINA10
AIFM2
CPT1B
IL17RB
CHDH
CHKB
ARHGEF5
TNF
LTA
TNC
CORO7-PAM16
CORO7
OSTM1
LMNTD1
ANKRD9
CNR1
MXD4
NEK3
SLCO4A1
SDC4
NFYC
TNFRSF19
FOXJ3
DNAI2
SEMA6D
MYO18A
LDB1
TSPAN14
KRT24
TMEM240
ZNF385A
SNAI1
MT2A
ATP8B4
TTYH1
FAM169A
SLC30A4
NAA38
CHD3
RSBN1L
CHD4
PCCA
VENTX
DNLZ
FAM178B
UTF1
SNORC
WNT1