ChIP-Atlas: Target genes

Potential target genes for RARA

Query protein: RARA
Distance from TSS: ± 1 kb  ± 5 kb  ± 10 kb
Sort key: SRX3584308 | iPSC derived chondrocytes
 
Color legends
  1000 750 500 250 1 0  (Values = Binding scores of MACS2 and STRING)

Download: TSV (text)
Links: Movie and Document for ChIP-Atlas Target Genes
RARA's Target genes

◢ RARA: Average

◢ SRX2748853: Adenoid cystic carcinoma

◢ SRX2748855: Adenoid cystic carcinoma

◢ SRX10442515: BE(2)-C

◢ SRX8814860: BE(2)-C

◢ SRX2635935: Hep G2

◢ SRX2635936: Hep G2

◢ SRX25244558: hESC derived endodermal cells

◢ SRX25244559: hESC derived endodermal cells

◢ SRX25244560: hESC derived endodermal cells

◢ SRX25244561: hESC derived endodermal cells

◢ SRX21236745: IMR-32

◢ SRX21236746: IMR-32

◢ SRX21236747: IMR-32

◢ SRX21236748: IMR-32

◢ SRX3584302: iPSC derived chondrocytes

◢ SRX3584303: iPSC derived chondrocytes

◢ SRX3584304: iPSC derived chondrocytes

◢ SRX3584305: iPSC derived chondrocytes

◢ SRX3584306: iPSC derived chondrocytes

◢ SRX3584307: iPSC derived chondrocytes

◣ SRX3584308: iPSC derived chondrocytes

◢ SRX3584309: iPSC derived chondrocytes

◢ SRX3584310: iPSC derived chondrocytes

◢ SRX3584311: iPSC derived chondrocytes

◢ SRX3584312: iPSC derived chondrocytes

◢ SRX3584313: iPSC derived chondrocytes

◢ SRX6039037: iPSC derived chondrocytes

◢ SRX6039038: iPSC derived chondrocytes

◢ SRX6039039: iPSC derived chondrocytes

◢ SRX6039040: iPSC derived chondrocytes

◢ SRX6039041: iPSC derived chondrocytes

◢ SRX6039042: iPSC derived chondrocytes

◢ SRX3584300: iPS cells

◢ SRX3584301: iPS cells

◢ SRX19662659: Ishikawa

◢ SRX19662660: Ishikawa

◢ SRX4671297: NAMEC8

◢ SRX4671298: NAMEC8

◢ SRX4671299: NAMEC8

◢ SRX014752: NB-4

◢ SRX014770: NB-4

◢ SRX17639399: NB-4

◢ SRX17639400: NB-4

◢ SRX17639401: NB-4

◢ SRX17639402: NB-4

◢ SRX8814876: Neuroblastoma

◢ SRX9607665: NTERA-2

◢ SRX9607666: NTERA-2

◢ SRX1035586: SK-N-SH

◢ SRX1035587: SK-N-SH

◢ SRX1035588: SK-N-SH

◢ SRX1035589: SK-N-SH

◢ SRX4671312: SUM 159PT

◢ SRX4671313: SUM 159PT

◢ SRX4671314: SUM 159PT

◢ SRX19662634: T-47D

◢ SRX19662636: T-47D

◢ SRX682379: TSU-1621MT

◢ SRX014781: UPR9

◢ SRX014782: UPR9

◢ RARA: STRING

ZNF335
PSMD1
NUP205
LOC102724770
DGCR6
RABL2A
G6PC2
POLR3F
DZANK1
NME6
IPO13
RABL2B
NVL
CACTIN
RWDD1
TAOK3
SUDS3
RPL21
LARP7
FARSB
C19orf48
TBCK
AIMP1
NUP85
POLR2E
GPX4
HSPA9
PAK1IP1
C6orf52
VDAC2
SERINC5
MAPKAPK5
PES1
PPP1R1B
ATP5MG
FAM187A
EFTUD2
CCDC103
DUX4
S1PR4
NCLN
ANAPC7
SEC61B
ZFHX4
MRPS7
MIF4GD
GGA3
PSMG2
CEP76
HADHB
HADHA
GOSR2
ZRANB2
DCTN1
EXOSC5
BCKDHA
VTI1B
ZNF576
IRGQ
NNAT
BLCAP
PNO1
UPF2
RPL35A
IQCG
LMLN
STAM
LYRM4
FARS2
DYNC1LI2
ARF1
DNAJB7
XPNPEP3
ST13
ZNF608
STAM2
PI4KB
SART3
ISCU
NEUROG2
SF3B3
COG4
ADNP2
PCBP1
PSMD12
TSN
TMED1
SELENOF
HS2ST1
RPS27A
CLHC1
FZD8
CAPRIN1
NDUFA4
CDX2
RHBDD3
EWSR1
ACTR10
UFM1
RAB11FIP1
NBAS
ADK
AP3M1
SRD5A1
NSUN2
WNT1
RPS12
LBX1
FABP7
SMPDL3A
VARS1
ZNF503
NOTCH2NLC
NOTCH2
RBBP5
RPS23
ATP6AP1L
TLE6
SMC2
SUPV3L1
MRPL11
TSNAX
MRPL3
SLC35B1
PRDM12
ITGB6
ERRFI1
ADAM18
TPM1
EVA1A
ANK2
REXO1
SKP1
HSPA1B
TTC8
COX7A2L
DEFA5
PDAP1
BUD31
GLRA1
FGF19
RABGGTB
NR2F1
PIP4P1
OSGEP
APEX1
C6orf47
APOM
BAG6
PROSER1
NHLRC3
ETS1
UNKL
C16orf91
LAMA4
FOXP2
ARID3C
DCTN3
PIN4
ICE1
MYO10
DDAH1
CCN1
LRGUK
ARHGAP11A-SCG5
ARHGAP11A
PALM2AKAP2
FAM104A
C17orf80
RIMKLB
MUC20
MRPS5
GOLGA5
DMRT3
MYLK4
NAV3
DPH6
CHODL
LRIG3
TMEM107
PARP11
VIP
ME3
PAF1
MED29
TMEM14A
SFI1
EIF4ENIF1
USP1
RBKS
BABAM2
SYNPO
SYBU
NEK7
TMEM120B
PPFIBP2
NHS
ICMT
HES3
IGFBP2
PDHB
SEC22B
MALRD1
FEZF2
SOX21
PTGES2
FRG2C
DBX1
PLAGL1
DAPL1
RGS12
RABGAP1L
MOBP
ABLIM3
NEUROG3
TDG
C12orf73
FOXD3
PAX8
RPL7
RDH10
BICRA
PDZRN3
SMURF1
TLE4
MXI1
SOAT2
IGFBP6
RGL1
SEC11C
RFX2
ALDH1A2
VEZT
FGD6
ABCG2
SMARCA2
KCNK16
PHC2
CLDN11
ASXL3
ARHGAP10
UBE2I
LRATD2
NFKBIL1
DDX39B
ATP6V1G2
KRT20
MEIS2
ARHGAP24
PHOX2B
FOXB2
SPACA1
HOXA3
SUCLG1
HOXA4
TLE1
KDM8
NMNAT2
HES1
PDE4DIP
EIF2S3
LRIG1
GPR176
RPS29
LRR1
PCDH11Y
COMMD1
CCT4
ZNF585B
ZNF383
SEMA6D
CEP41
STK36
RNF25
CCDC33
LMO4
MRTO4
EMC1
ARHGEF28
OR6B2
NDUFA10
SCGB1A1
C5orf63
C8B
REV3L
URM1
FRMD7
HOXB1
CCDC88C
NUTM2D
MNX1
CACNA1D
ACSS3
TAF9
RAD17
AK6
TMEM275
TM9SF1
IPO4
TSSK4
VGLL4
BRINP1
LDHB
VCAN
CBFA2T2
USP29
AQP6
GATA6
HHIP
RAI14
GAS7
PRRX1
NEK3
B3GALT5
BECN2
KDM2B
CERCAM
SULF1
PGLYRP1
IGFL4
GADD45GIP1
ZFAND1
CHMP4C
ATOH1
STARD13
MET
METTL24
FAM222A
TLE2
ZFX
SUPT20HL1
PLEKHG4B
TEX2
STXBP5L
CITED2
FHL1
ALPL
SOGA3
WT1
CLEC18C
BFSP1
PKDCC
MED4
METTL11B
COL17A1
GORAB
NRG2
NCOA7
PSMB5
EVX1
KIF16B
ELMOD2
PPP1R1A
PCBD1
BNIP3
RPS24
POLR3A
IRF2BP2
BAIAP2
SYNPR
SALL1
TP53INP1
TPO
TLE3
HK3
BTBD1
CRYAA2
CRYAA
CNPY2
RPL34
RBP3
PITPNM3
ALKBH5
FGFR2
GGCT
TMA16
PJA2
DTX4
CNTN4
PLEKHA5
TBX3
USP17L5
USP17L30
USP17L29
USP17L28
USP17L27
USP17L26
USP17L25
USP17L24
SLC7A5
TTR
MTMR7
TYRO3
LMO1
PDE6B
TNFRSF19
CETN1
MAB21L2
CR1L
PPP1R16B
TESC
GRIK2
TPST2
LRRC1
SLA
MOB3B
OCLN
DMBX1
HNF1A
PKHD1
NPAS1
LZTS1
MSX1
FREM1
SECISBP2L
GFRA1
TANGO6
FOXB1
DIO2
TFAP2B
CLDN2
NEUROG1
PDE1B
NXPH2
EVX2
TRABD2B
FILIP1L
TPH2
PDE12
CDH18
RUNX1T1
PPP1R12B
MBNL3
DHX32
RXRG
GMPR
OAZ3
CYP26A1
FRS2
RFX3
APTX
DNAJA1
C1orf226
PIK3C2A
NEUROD1
SLAMF8
NECTIN1
CCDC198
SLC14A1
HOXA1
HOXA2
VOPP1
CATSPERG
GTF3C4
DDX31
HOXB3
DLX4
HOXB4
CD69
IL17RD
FRG2
KLHL7
TAPT1
ADO
RPN1
ELMO1
EFNB2
TRMT9B
GCSAM
ZPBP
CLGN
SMIM28
NCOR2
SLC10A2
CS
CADM3
TBC1D8
AGMO
METTL3
KLHDC8A
VSIG10L2
RARB
MDFIC
HPCAL1
TCF7L2
NID1
C8orf34
SP8
ERLIN2
NFKBIZ
ZNF367
CXXC4
GALNT14
PPP2R5A
HOXD3
HOXD4
PANK4
HES5
MEF2C
PRR16
NOTCH1
CXCL5
CNN3
PPBP
PF4
TTI2
ZCCHC13
SNAPC1
CPA1
BAZ2B
SOX6
EGF
BBS9
DIPK1B
CPEB2
CDC42BPA
BHLHE22
MBTPS1
SALL4
ADAMTS18
ATOH8
SNCG
MMRN2
UNCX
CTXN3
SLC39A6
ELP2
CDH16
TNNI3K
NOTCH2NLB
NOTCH2NLA
SCHIP1
SOST
ST8SIA3
ZFHX3
ECM1
HAPLN1
HOXC4
PRDM13
CEBPA
KRT16
PTGR1
CDC73
DUSP6
HNMT
ADGRL2
CER1
ARL4D
RBBP7
ID1
KIF21B
CAMTA1
PAH
ASCL1
ADM
SYTL2
RARA
ZDHHC1
RHOB
ZNF214
NLRP14
ZGPAT
ARFRP1
HAND1
FGD4
PAM
CHD8
GATA3
TCF4
THRA
PARS2
GZMK
KCNN4
TRIM65
MRPL38
GAD2
JAKMIP1
EPB41L5
OTUD6A
AWAT2
ST18
ABCA4
ZFHX2
OR10AC1
CLEC19A
PRRC2C
OR5A2
OR5A1
TMEFF2
CLEC18B
TMEM9
TCF12
EPB41L2
AGPAT4
ABHD17C
PCBD2
CBY2
SPG7
NINL
TMCC3
KBTBD8
NFIA
PRKCA
LIMK2
ZBTB2
SLC35E3
NUP93
NXPH4
WRAP53
TP53
TMEM132C
FOXP1
DACT2
RIC8B
CCDC169-SOHLH2
CCDC169
CUBN
ZC3H12B
ID2
RBM20
ZBTB38
P2RY14
AMBN
CCDC200
KMT2A
ALG14
LIPG
LIN28A
CCND1
GJA1
SPAM1
WDR59
PDPN
CD83
LMO3
TRIM2
KCNIP4
SOX5
TNRC6B
PADI2
SASH1
PDHX
APIP
ZNF746
HTR1F
MIER1
DNAI4
FOXA2
GUCY1A1
PGM2L1
PHACTR2
HAAO
TANC1
ALOX5AP
AJUBA
SSBP3
OAZ2
EIF1
ARSF
AIPL1
PIMREG
FLNB
CNTN1
SLC2A9
CFAP69
CARD10
NEUROD4
RIPOR2
LRRC4
CHD1
TFDP2
MXRA7
MAP2
DMRTA1
INSM1
RASL12
KBTBD13
LHX2
RAX
AXDND1
PMFBP1
DLGAP1
NDUFB3
FAM126B
BMPR1B
LRRC10B
LDLRAP1
MAGEA11
ARMC12
PCDH18
TWIST1
MBNL1
DAAM1
ZNF385B
KCNN2
TAS2R9
TAS2R8
TAS2R7
BNC2
FAM107A
ARHGEF10
PCDH17
SPON1
FRYL
ANKS1B
FAM171A2
AKAP7
ACBD5
CREB5
UTRN
TPRA1
REC8
GPC6
LIN28B
FERD3L
SOCS3
DMD
METTL25
CCDC59
IPO11
DIMT1
BMP5
APP
CPA2
CCDC141
FAM120B
GNB2
ACTL6B
DLL1
FHDC1
ERCC1
IGFN1
FMO3
H2BU1
H2AW
CDC42EP2
RPS10-NUDT3
RPS10
PON2
LCA5
LAPTM4A
FABP5
SH2B1
VANGL2
MAFA
RFX6
POU2F1
TNFSF18
PAX3
GALNTL5
RPL17-C18orf32
RPL17
ARID5B
CDK14
USP17L21
USP17L20
USP17L12
USP17L22
USP17L11
USP17L19
JDP2
FABP9
USP17L13
USP17L18
USP17L10
SHOX2
RSRC1
YAP1
ELAC1
PLAAT4
SVOPL
MAMDC2
MTRNR2L1
WDR74
STX5
MTRNR2L2
MSH3
DHFR
EAPP
DUSP29
SKIL
DHRS3
MTRNR2L8
SP2
ARID3B
SPATC1L
NFE2
PMAIP1
IER3
FLOT1
ZNF775
NDUFS7
ZP4
ZSWIM1
SPATA25
NEURL2
CTSA
DPP9
KAT6B
TBL2
GPR108
LEFTY2
BHLHE40
TRIP10
PCGF1
SPCS1
GLT8D1
VSIR
LBX2
ARHGDIA
HOXA5
P4HB
PPP1R35
MLEC
CDCA7L
ASB2
TEPSIN
NDUFAF8
LPIN1
NBEAL2
CCDC12
ANKLE2
DNM2
TBX2
COL23A1
TAF12
S100A10
SLC39A7
RXRB
HSD17B8
DLL4
PPP6R3
SP1
PRUNE2
FBXO31
SYTL3
HPD
MINDY2
SP5
EXOC2
HUS1
MAP1LC3B
TMEM70
ELOC
H2BC17
H2AC17
ANKRD28
FRA10AC1
COL11A2
SMAD3
BAZ2A
ARSG
RPL22
RNF207
FXYD2
XKR7
STX18
NPAS4
E4F1
RAB5B
PMEL
CDK2
ID3
CHN2
STAP2
CRABP2
TMEM242
MRPL34
DDA1
ABHD8
HOXC6
PDE4D
CPVL
DOLPP1
OTUD7B
KDM6B
ASB6
KANSL3
FER1L5
ARRDC4
PGK1
SEPTIN9
DONSON
UPF3A
DYNLT1
ETAA1
ATP5F1B
POR
ATF6
POP5
JUP
SH3BP2
ARHGAP22
NELFA
PC
CERK
EXOSC4
KATNB1
RBPJ
KCNAB2
BCL3
MRPL20
PANK2
PPCDC
TRIB1
NINJ2
RARG
PTK2B
BMF
CCDC174
FAM72C
RHBDD1
SNX16
SQSTM1
CLCN3
TMEM101
CCNL2
ABHD2
SREBF1
GPCPD1
QPRT
SRSF11
ADAP1
RING1
SMARCD2
GATA4
SIRT4
MFSD10
MTMR4
PRKAG2
MIDEAS
ELOVL5
TOP2A
ABCC10
HEXIM2
SLX1B
SLX1A
LFNG
BOLA2B
BOLA2
ZNF687
SMG6
ZNF718
ZNF595
NBPF1
ZFP36
PLEKHG2
SACM1L
PSMB3
PCGF2
CNOT2
TRIM46
KRTCAP2
RASSF5
NRL
ATP1A1
NOL4L
CALM2
FURIN
MUC3A
HNRNPA2B1
CBX3
KAT7
RNF34
HSPA1L
HSPA1A
PCNA
MRPS31
EIF1B
CBX5
INHBE
GLI1
ANGPTL4
PSPN
ALKBH7
TLX2
ECEL1
DLC1
PPP1R18
NRM
RFX1
LRRC40
KAZALD1
ITGAV
C9orf92
ARHGAP30
THOP1
SGTA
POLDIP3
NUBP1
NFKBIA
RHOQ
ATP6V1E2
TRAF7
EIF2AK3
FAM72D
ZFAND2A
STIP1
GTF3A
OSBP