ChIP-Atlas: Target genes

Potential target genes for RARA

Query protein: RARA
Distance from TSS: ± 1 kb  ± 5 kb  ± 10 kb
Sort key: SRX8814876 | Neuroblastoma
 
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  1000 750 500 250 1 0  (Values = Binding scores of MACS2 and STRING)

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Links: Movie and Document for ChIP-Atlas Target Genes
RARA's Target genes

◢ RARA: Average

◢ SRX2748853: Adenoid cystic carcinoma

◢ SRX2748855: Adenoid cystic carcinoma

◢ SRX10442515: BE(2)-C

◢ SRX8814860: BE(2)-C

◢ SRX2635935: Hep G2

◢ SRX2635936: Hep G2

◢ SRX25244558: hESC derived endodermal cells

◢ SRX25244559: hESC derived endodermal cells

◢ SRX25244560: hESC derived endodermal cells

◢ SRX25244561: hESC derived endodermal cells

◢ SRX21236745: IMR-32

◢ SRX21236746: IMR-32

◢ SRX21236747: IMR-32

◢ SRX21236748: IMR-32

◢ SRX3584302: iPSC derived chondrocytes

◢ SRX3584303: iPSC derived chondrocytes

◢ SRX3584304: iPSC derived chondrocytes

◢ SRX3584305: iPSC derived chondrocytes

◢ SRX3584306: iPSC derived chondrocytes

◢ SRX3584307: iPSC derived chondrocytes

◢ SRX3584308: iPSC derived chondrocytes

◢ SRX3584309: iPSC derived chondrocytes

◢ SRX3584310: iPSC derived chondrocytes

◢ SRX3584311: iPSC derived chondrocytes

◢ SRX3584312: iPSC derived chondrocytes

◢ SRX3584313: iPSC derived chondrocytes

◢ SRX6039037: iPSC derived chondrocytes

◢ SRX6039038: iPSC derived chondrocytes

◢ SRX6039039: iPSC derived chondrocytes

◢ SRX6039040: iPSC derived chondrocytes

◢ SRX6039041: iPSC derived chondrocytes

◢ SRX6039042: iPSC derived chondrocytes

◢ SRX3584300: iPS cells

◢ SRX3584301: iPS cells

◢ SRX19662659: Ishikawa

◢ SRX19662660: Ishikawa

◢ SRX4671297: NAMEC8

◢ SRX4671298: NAMEC8

◢ SRX4671299: NAMEC8

◢ SRX014752: NB-4

◢ SRX014770: NB-4

◢ SRX17639399: NB-4

◢ SRX17639400: NB-4

◢ SRX17639401: NB-4

◢ SRX17639402: NB-4

◣ SRX8814876: Neuroblastoma

◢ SRX9607665: NTERA-2

◢ SRX9607666: NTERA-2

◢ SRX1035586: SK-N-SH

◢ SRX1035587: SK-N-SH

◢ SRX1035588: SK-N-SH

◢ SRX1035589: SK-N-SH

◢ SRX4671312: SUM 159PT

◢ SRX4671313: SUM 159PT

◢ SRX4671314: SUM 159PT

◢ SRX19662634: T-47D

◢ SRX19662636: T-47D

◢ SRX682379: TSU-1621MT

◢ SRX014781: UPR9

◢ SRX014782: UPR9

◢ RARA: STRING

ATF6
RGS5
C9orf92
KIAA1549
COMTD1
GPR68
TBX2
ARHGAP22
ENOX1
HTR1F
CNKSR3
IKBKB
C6
ZNF804A
DAOA
KPNA4
HNMT
AGBL3
VSTM2A
HAPLN2
PPFIBP1
KCNJ6
ARHGAP24
PSMD6
HHAT
AADACL4
DGKB
RNF34
MCC
SPATA24
SLC35E3
TBX3
MTRNR2L2
MSH3
DHFR
FRA10AC1
SEMA5B
MGAT5
CCDC73
TTC30B
CBFA2T2
TEX101
CDC7
KBTBD11
PDE3A
TMEM26
CYP51A1
TNFSF15
ADAMTS18
RWDD1
CXCR4
CDK18
COL21A1
BMPR1B
VIP
GLYAT
FGGY
ENPP7
FRMD3
IGFBP3
HTR4
SMIM30
ABCA12
PRELID2
SPNS3
BMP5
NR3C1
PDZRN4
MUSK
C1orf87
MARCOL
P2RX4
CRABP2
PKIB
KCTD7
CD180
TES
LCLAT1
GASK1B
CAMKK2
UGP2
SLC12A3
MYRFL
TNFRSF19
LAPTM4A
RMDN2
CLCN3
NT5DC1
IGFBP7
TIAM1
PPP1R1C
CDH18
BDNF
KRT82
CNTN4
SCHIP1
MSRB2
RDX
FOLH1B
SDC3
ZC3H3
SCML4
INPP4B
SMIM28
CPO
KIAA0319
QPRT
CDK6
LEPR
TOX3
SLC16A7
LMO4
APOL6
MYT1L
NUBPL
MARCHF11
PLAC8L1
FSHR
FEZF2
NELL1
AQP6
KPNA5
MFSD6
PITPNB
EHF
RARB
SYBU
HABP2
NRP1
PACRGL
OPRM1
BEND4
TTLL6
DNAJC15
MTRNR2L8
FLRT3
FAM228B
PFN4
TNIK
HAO1
KCNV1
MAGEB3
MAGEB2
DIABLO
RERE
ABHD2
RGS8
FAM91A1
MIER1
DNAI4
PTPRN2
RERG
BANK1
PTPDC1
H3Y2
PTPRB
TLE4
DCTD
ARHGEF28
CCDC172
ADGRL2
FYB2
CHRNA1
SYTL3
DYNLT1
IGFBP5
CLMN
SAMSN1
GRIK2
SRGAP3
KIF3B
KCTD8
MAMDC2
TPH2
HAND1
SLC28A3
SLA
PSME3IP1
RSPRY1
ACTA2
CHGA
TMTC2
NRXN3
GADD45A
ANO3
HS3ST5
MARVELD2
MMP15
PLAC1
TYRP1
ATP1A1
PDHA2
DEFB130B
DEFB130A
THSD7A
CCDC178
DDAH1
RARA
ZNF385B
BIN1
PRCC
OLFML1
CD200R1L
ZNF335
COL3A1
TLE6
NRXN1
UBXN7
IGDCC3
PDE4B
SH3RF2
SAMD11
CILP
CABCOCO1
MTUS2
EGLN3
ZFPM2
KCNMB4
MME
PKDCC
GCSAM
FILIP1L
LIMA1
LINGO2
RBFOX3
SULF2
C14orf93
LMCD1
PIPOX
QRFPR
ANKFN1
ZNF608
HS3ST3B1
NRCAM
HPGD
PDZRN3
ATP8A1
OLFM3
SLC37A3
RAB19
HK1
GRWD1
PKHD1
KCNJ14
ABCA4
GRK5
FAM184A
DLG2
PTPRE
CELF2
PRPF40B
ROBO1
WDR74
STX5
DMD
NRP2
GFRA3
CCKAR
NRSN1
BTBD8
CRKL
LOC105378979
KRT6C
TMEM45A
RPL35A
IQCG
LMLN
ZNF148
IL12A
C1orf185
SPARCL1
MAN1A2
MTRNR2L1
PMFBP1
PANK3
HPCAL1
OXR1
COL10A1
ADAM18
ADAM23
SETD7
APCDD1L
SH3D19
GBP4
SYT4
KREMEN1
SNX7
DCN
FREM1
KIF5C
SORBS2
DOCK10
TRAF3IP2
C2orf83
PIK3CG
GK2
SGPL1
GSC
DNAAF2
SPATA4
ZMYM1
FEZ2
OGFRL1
ROBO2
PRKG1
RPS29
DUSP23
SRGAP2
SULT1C4
WNT5A
PHB
LIPC
ELF5
C9orf62
KAZN
PRLHR
RNF111
NID2
ZNF3
COPS6
CFC1
FDX1
NBN
POLR2E
GPX4
NOX3
CSRNP3
GOSR2
STARD13
ADRB3
GPR162
PTN
TXNRD1
PAM
DCC
ABRA
PXYLP1
CHODL
EVPL
LGSN
KCNIP1
CALM2
SLC6A5
KANK4
GAST
SMUG1
TRDMT1
GAB2
SERP2
GPR75-ASB3
GPR75
RABL2B
SESN1
CEP57L1
GHITM
TNS3
CACHD1
DRD3
JAM2
HSPA4L
PROKR1
WT1
NCAM2
UNC5A
OSR1
PCDH8
TGFBI
SIPA1L2
PPP1R1B
MALRD1
FAM187A
EFTUD2
CCDC103
PCDH9
EXOSC5
BCKDHA
VAV3
ACKR4
FAM209A
CDH12
LRRC18
MTRNR2L9
UBL4B
SGCE
PEG10
TPD52
DRGX
NECAB1
CLGN
N4BP3
CLK2
TVP23C
KCNK2
BCL2L14
MDFIC2
GFRAL
CERK
GYS2
IGFBPL1
RASD2
DAPP1
ETAA1
ZADH2
TSHZ1
OSBP2
FAM205A
SOX5
SGCD
NBEA
MAB21L1
SEC22B
PTPN5
MTUS1
RP1L1
COQ9
CIAPIN1
IFNL3
PLET1
DUX4
ATP23
CADM2
TENM2
RABGGTB
CHRDL2
HIGD1C
TIMELESS
CD74
SCG2
ITGAV
ZNF330
ARHGAP30
PRG2
SNCAIP
LMO7
KLHL1
PES1
SKP2
LMBRD2
MAGEB5
ID2
MRTFA
TMED1
PACSIN3
IRAK2
CEP85L
MRS2
DNAH1
AGTR1
PPARGC1A
PLPP3
SCCPDH
ACACB
ANKRD28
ARHGEF3
KCNIP4
HADHB
HADHA
ZFHX3
MTNR1A
CNTN5
FER
LNPEP
FAM124A
EPYC
LPIN1
SUPT20HL2
LOC102724770
DGCR6
FGD5
SYT16
CNTN1
TMEM17
JDP2
MYH15
PSPH
CCT6A
NACA2
TAOK3
SUDS3
CFAP126
NCR2
DOCK9
PTPN20
FBXO34
RFPL1
ZFHX4
ELAVL4
SNX4
TMEM107
C8B
PCLO
CAMK1D
RABL2A
DCLK2
NOD1
APOH
LY86
POU4F2
SLIT1
MINDY3
SRGAP2C
SRGAP2B
GPER1
DPYSL3
SH2D4B
SYTL2
MLH3
GLI3
DIPK1A
IZUMO1R
KMT5A
SLC39A13
RBMXL1
KYAT3
CALHM5
SLC19A1
LRRC43
OR10AD1
IL31
TRIM2
MAB21L2
C2CD4C
FBXO30
AMOT
PLEKHA5
SH2D1A
C10orf143
DAPL1
ST3GAL6
TRIB2
JUP
RUFY4
SSH1
MLXIP
VWA3B
DCP1B
UNC5C
TCAF2
RAB33A
LRIG3
GABRG2
COX7A2L
RASL10B
ABCA1
ARHGEF10L
SLC25A26
TMEM229B
RPS12
C3orf85
METTL24
B3GNT3
COLQ
MAPK1
ENPP2
B3GNT4
SSR3
MTRF1
NAA16
STAT1
CCSER2
CRYGB
BAMBI
NCS1
RESF1
PIK3C2G
TUBE1
FAM229B
SIPA1L1
PCGF1
LBX2
TLX2
ADCY8
TEAD1
PCDH10
TMEM9
RBFOX2
RIN2
MCHR1
EYS
PLCL1
HNF4G
PCSK1
GHRL
AGR3
FAM13C
GPR19
GSAP
RIMS1
IQCJ-SCHIP1
IQCJ
PLXNA1
NAV1
DLC1
RASL11A
SLC17A2
YY1AP1
DAP3
ARID5A
OGFOD2
ARL6IP4
ABCB9
IL24
DEGS2
UFM1
GCHFR
RMDN3
OAZ3
CAVIN4
GPR1
ARX
FYN
RNF145
LOC283710
MTNR1B
OTOGL
CD28
NKIRAS1
NR1D2
TMCC3
SLC11A1
TDO2
CDH4
FAM149A
RHOBTB2
RAG1
ZNHIT6
HPD
PSMD9
APC
HDGFL1
NUP85
ESRRG
ATP6V1G3
HSD17B12
CHST6
CHST1
B3GAT1
GPR22
MRPS7
MIF4GD
GGA3
HOXC4
ACYP1
FGF19
KCNQ5
KCNN2
SMTNL2
CLVS2
MAD2L2
CLDN12
DRAXIN
SMC3
PDE5A
ZNF503
SMAD3
RBP1
NFASC
FOXN4
PAPOLB
ASB6
RPS7
USH2A
NALCN
GTF3A
POLR1F
DENR
TTC39A
IL17F
RGS13
PRKG2
RXFP2
HORMAD2
TSPAN31
ZNF157
MARCHF9
CDK4
FICD
AMY2A
CHRNA9
NAA11
MLIP
TRPA1
LIPK
MAP1LC3B2
C3orf49
RPS23
ATP6AP1L
SBNO1
FAM72C
FAM72A
MYT1
GLCCI1
ERN1
PYGB
PPM1L
GPR88
RBM20
SEL1L3
PKNOX2
MCCC1
SPART
CDY1B
CDY1
FRG2C
SART3
ISCU
DR1
CCDC33
FAM107B
STN1
KLHL32
C1QL3
LHFPL6
CCDC182
FMN1
AVIL
DEFB136
FFAR4
C12orf65
IRX6
PARP14
CACTIN
CASD1
ATXN7
DLX5
MAPK10
PPFIA2
NUP205
SEC61B
ZNF77
LRRN4
FSTL4
POTEI
DDR2
SNAPC1
SCGB1A1
FH
COPB2
DENND1B
ERVMER34-1
MREG
SLC37A1
RSPH1
AGPAT4
SUCLG1
SLX1B
SLX1A
BOLA2B
BOLA2
BOLA2-SMG1P6
PIGM
CREB5
KCND2
NOMO1
VSIG8
SMYD1
PSMD1
FAM135B
MAP1LC3C
NNAT
BLCAP
CACNA2D1
TAGLN2
EHBP1
ITGA4
RPL21
ADK
AP3M1
SNCG
MMRN2
GPR34
FAM104A
C17orf80
MAGEB10
FAM151A
GTF2A1
FAM240C
TLE3
TMOD1
OBP2A
UPF2
NSMAF
SHMT2
SLC10A4
NDUFA4L2
TCF4
AQP4
FNDC7
FAM83B
CDK17
SLC25A30
SOHLH2
PI4KB
HOXA3
MAP2
SLC7A2
SCARB2
FAM47E
MAF
RBBP5
IQCA1
CYRIB
SOCS6
GGT1
LRRC75B
MGARP
TNFSF13B
ARL4D
STK36
RNF25
KLHL38
LIMS1
BCAR3
ABLIM1
TRIL
RAMP1
FGF1
BBS9
POLR2M
TIAF1
ANXA13
DSC3
EPHA7
NAV2
STRN
RIPOR2
LEO1
PNO1
KIAA0408
SH3BGRL2
SRPK2
ABCC3
ZRANB2
NT5E
TPM1
SH3BP4
PPFIBP2
SCN1A
IFRD1
DCTN1
KYAT1
PRXL2A
ARL6IP5
UBA3
SMAD1
HCRTR2
HEATR5A
SLC35B1
ENOX2
GPBAR1
GALNT15
TMEM205
RAB3D
CCDC159
TAB2
FOXO1
CNMD
FARSB
XRN2
CAPNS2
RPH3A
DNAH8
FABP2
TYRO3
SOGA3
SCRG1
RALYL
PM20D2
MORN3
CEP43
LIG3
CLIC4
TTC8
MVB12A
BST2
NCDN
KIAA0319L
TTC12
DDIT4L
CCDC68
PYROXD2
MAPK8IP1
OR8K3
CSRP2
PCM1
SYNE3
TVP23B
ERI3
SLC10A6
GDAP1
ANTXR2
RAPGEF4
ADRB2
MEGF6
PRL
SYNPO
TSACC
CCT3
LRRN3
GNA12
SMAD2
SCGN
ZFHX2
MUC15
OR2AE1
KIF26A
BTN3A3
SHOC2
BBIP1
CFAP20
TMEM114
MYF6
MYF5
TRPM3
ECT2L
FAM72B
LRRC8B
CNTNAP4
SLAMF8
LIX1
MGP
KCTD3
FRZB
SF3B3
COG4
MSX2
RAI14
PPARG
NKX6-2
ERAP1
PRR16
DACT1
ZNF561
SUPV3L1
RIMBP2
RPS6
NVL
HTR3B
PLAAT4
ARID3B
DNAJB8
ST6GALNAC3
HOXC6
EVA1A
HOXC8
THEMIS
FAM160A1
DCLK3
DDX60
IGFBP4
OMP
SACS
FNIP2
FAM162B
CCT2
KNTC1
SMLR1
RPL24
PSMD12
ARHGEF38
ABR
MARCKS
RGS18
ADAM12
KLK3
RWDD3
TSNAX
NFIB
CCNE1
FAM98A
FAM72D
REXO1
GOLGA5
METTL7A
B3GAT2
SLC22A8
ERICH2
OR8J1
ANGPT1
OR8K1
NPY2R
CDPF1
LIG4
ABHD13
AOPEP
TMC3
KLKB1
NCK2
UBTFL1
CYTIP
ARF1
HOXB1
SLC39A14
CAAP1
ELAPOR2
STK32B
IL22
SEPTIN9
SEMA6D
FRMD6