ChIP-Atlas: Target genes

Potential target genes for RARA

Query protein: RARA
Distance from TSS: ± 1 kb  ± 5 kb  ± 10 kb
Sort key: SRX19662634 | T-47D
 
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  1000 750 500 250 1 0  (Values = Binding scores of MACS2 and STRING)

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Links: Movie and Document for ChIP-Atlas Target Genes
RARA's Target genes

◢ RARA: Average

◢ SRX2748853: Adenoid cystic carcinoma

◢ SRX2748855: Adenoid cystic carcinoma

◢ SRX10442515: BE(2)-C

◢ SRX8814860: BE(2)-C

◢ SRX2635935: Hep G2

◢ SRX2635936: Hep G2

◢ SRX25244558: hESC derived endodermal cells

◢ SRX25244559: hESC derived endodermal cells

◢ SRX25244560: hESC derived endodermal cells

◢ SRX25244561: hESC derived endodermal cells

◢ SRX21236745: IMR-32

◢ SRX21236746: IMR-32

◢ SRX21236747: IMR-32

◢ SRX21236748: IMR-32

◢ SRX3584302: iPSC derived chondrocytes

◢ SRX3584303: iPSC derived chondrocytes

◢ SRX3584304: iPSC derived chondrocytes

◢ SRX3584305: iPSC derived chondrocytes

◢ SRX3584306: iPSC derived chondrocytes

◢ SRX3584307: iPSC derived chondrocytes

◢ SRX3584308: iPSC derived chondrocytes

◢ SRX3584309: iPSC derived chondrocytes

◢ SRX3584310: iPSC derived chondrocytes

◢ SRX3584311: iPSC derived chondrocytes

◢ SRX3584312: iPSC derived chondrocytes

◢ SRX3584313: iPSC derived chondrocytes

◢ SRX6039037: iPSC derived chondrocytes

◢ SRX6039038: iPSC derived chondrocytes

◢ SRX6039039: iPSC derived chondrocytes

◢ SRX6039040: iPSC derived chondrocytes

◢ SRX6039041: iPSC derived chondrocytes

◢ SRX6039042: iPSC derived chondrocytes

◢ SRX3584300: iPS cells

◢ SRX3584301: iPS cells

◢ SRX19662659: Ishikawa

◢ SRX19662660: Ishikawa

◢ SRX4671297: NAMEC8

◢ SRX4671298: NAMEC8

◢ SRX4671299: NAMEC8

◢ SRX014752: NB-4

◢ SRX014770: NB-4

◢ SRX17639399: NB-4

◢ SRX17639400: NB-4

◢ SRX17639401: NB-4

◢ SRX17639402: NB-4

◢ SRX8814876: Neuroblastoma

◢ SRX9607665: NTERA-2

◢ SRX9607666: NTERA-2

◢ SRX1035586: SK-N-SH

◢ SRX1035587: SK-N-SH

◢ SRX1035588: SK-N-SH

◢ SRX1035589: SK-N-SH

◢ SRX4671312: SUM 159PT

◢ SRX4671313: SUM 159PT

◢ SRX4671314: SUM 159PT

◣ SRX19662634: T-47D

◢ SRX19662636: T-47D

◢ SRX682379: TSU-1621MT

◢ SRX014781: UPR9

◢ SRX014782: UPR9

◢ RARA: STRING

SPATC1L
SP2
TEPSIN
NDUFAF8
DOLPP1
DNM2
ARRDC4
OSBP
KATNB1
RAB5B
PMEL
CDK2
SP1
STIP1
ARHGDIA
P4HB
ZNF687
RFX1
NLK
ANKHD1-EIF4EBP3
ANKHD1
EVI5L
UBE2C
ACTL6A
TOP2A
GOT1
GLRX5
G3BP1
ARID4A
DUX4
MAMDC2
HSP90B1
STT3A
TMEM94
PXMP4
EIF2AK3
SKA2
PRR11
TDRKH
JUP
TCERG1
MPV17L2
ARNTL
SNRPF
BAZ2A
ATP5F1B
PITPNM1
RBM27
KAT7
PRR14
FBRS
ARMC1
HNRNPUL1
TMEM60
PHTF2
HSPA5
TMEM218
SYP
PRICKLE3
ZNF48
TBC1D10B
MYLPF
SLC34A3
TUBB4B
FAM166A
STPG3
DROSHA
C5orf22
H2AZ2
PGK1
MTMR4
SEPTIN4
NPR1
ILF2
TRAF2
MSANTD4
ATP5MC1
TMX2
MED19
MVD
CIC
SHC1
FLAD1
CKS1B
ZFYVE21
XRCC3
HNRNPL
PDK2
RECQL
GOLT1B
NCDN
KIAA0319L
TEDC1
CRIP1
SEL1L
HNRNPC
COQ8A
STAP2
MPND
CHCHD6
WDR97
MAF1
CYC1
PSMD4
RFWD3
TOMM40
VIRMA
TOM1L2
DRC3
ANAPC5
AJM1
MAMDC4
SERP1
EIF2A
SLC39A2
METTL17
FAAP24
CEP89
KPNB1
PSPN
ALKBH7
FAM72C
FAM72D
THRA
C16orf95
OS9
TMEM70
ELOC
EEF1AKNMT
FAM72A
SPSB3
NUBP2
MRPS34
EME2
TBCCD1
DNAJB11
KAT6B
GPR108
TRIP10
ZNF77
TARS2
SLC25A41
KHSRP
SPAG7
ZSWIM3
ACOT8
SLX1B
SLX1A
BOLA2B
BOLA2
CORO1A
SULT1A4
SULT1A3
PRKACA
PPWD1
CENPK
AGER
RNF5
AGPAT1
PITX3
GBF1
TMEM160
IMMP1L
ELP4
E4F1
PGP
BRICD5
PROSER3
LIN37
HSPB6
SARNP
ORMDL2
CAMTA1
AK2
PWWP2A
UNG
ALKBH2
NFATC2IP
MTMR12
INCENP
NUMB
SLC25A25
NAIF1
NCBP2AS2
NCBP2
UBALD2
ZNF143
ABHD2
BOLA2-SMG1P6
AKR1E2
TICRR
AP3M2
DNAJC14
CENPF
SPTLC2
ATP5PD
CNOT1
ATG9B
ABCB8
YIF1A
TMEM151A
PRPF40A
ARL6IP6
LRRC45
CENPX
RAC3
FRYL
PAN2
IL23A
RXFP4
KHDC4
GOLPH3L
HBP1
CCDC146
CNOT3
DCUN1D4
ZWINT
DPAGT1
H2AX
HMBS
RBM15B
MANF
COPZ1
ZSWIM4
MAEA
BCAS3
GPR84
NUP107
ZBTB5
SRP9
LRCH4
FBXO24
PKLR
FDPS
DCTN4
ENSA
MSMO1
NDUFB3
FAM126B
XAB2
STXBP2
PCP2
ZFYVE26
RAD51B
FRG2C
ANP32A
ZNF688
RBM42
TMEM217
TBC1D22B
CYB5B
TYK2
SIN3A
TMCO6
NDUFA2
IK
GOLGB1
KDM4B
YJU2
PHB
CDC23
ALKBH3
HGS
ARL16
ETF1
CGGBP1
ZNF654
CBX5
HNRNPA1
PAIP2B
PRRC2B
INTS4
SIRT2
NFKBIB
MTFR2
TMPO
MTR
MSTO1
ISY1-RAB43
ISY1
SPRING1
RNFT2
PNPO
PPP1R3F
FOXP3
IARS1
MAP3K3
RPLP0
GCN1
WDR25
WARS1
HMX2
BUB3
PPP1R12B
UBE2T
FAM126A
WBP1L
WDR89
BIVM-ERCC5
POGLUT2
BIVM
BRIP1
ZSWIM1
SPATA25
NEURL2
CTSA
RAD23A
CALR
FARSA
SSR3
ZMAT2
HARS2
HARS1
NFE2L1
SLC25A42
MCM3
RBM48
PEX1
TROAP
FAM161B
COQ6
PI4K2A
MORN4
PPP2R5A
ECT2
PSMB3
PCGF2
POLR2G
ZBTB3
IGSF9B
CENPA
THAP1
CYCS
RGS14
LMAN2
MLH1
EPM2AIP1
NRL
DCAF11
F11R
PLEKHA8
FKBP14
NUPR2
CHCHD2
ZNF718
ZNF595
CEP131
GPR137
RAP2A
ACAP2
ZNF519
NUF2
MOGS
WBP1
IBTK
INO80B
UBP1
H4C9
H2BC12
H2AC12
GATAD2A
H2BC14
H2AC14
H3C10
H2BC13
H2AC13
GLCCI1
SLC33A1
DDOST
VAMP2
PER1
RPS20
ABL1
LENG1
DDX49
COPE
LARS1
PANK2
WIPI1
POU5F1
TCF19
CCHCR1
CDKN3
USP16
RWDD2B
ZDHHC16
EXOSC1
KDM4D
CWC15
HMGCR
KLHDC10
UVRAG
TNFAIP8L2-SCNM1
TNFAIP8L2
SCNM1
LYSMD1
TMOD4
FRMD5
BABAM1
TNRC6B
NDUFAF2
ERCC8
HMGCS1
DNAJB5
RAB4B
MIA
ZNF555
CNPY3
MYH10
KANSL1
LMOD1
TIMM17A
EXOC4
SRPRA
H4C14
H3C15
H3C14
H2AC19
H2AC18
NUDT2
KIF24
WDR74
STX5
SLC39A5
RNF41
NABP2
ZNF691
FDFT1
VPS26B
NCAPD3
TMA7
CCDC51
ATRIP
PLXNB1
PDXP
POC5
NME7
BLZF1
LINC02210-CRHR1
OPA1
IFI35
RPL27
VCP
FANCG
SECISBP2
CKS2
ZNF785
SYNE4
LOC101927572
ALKBH6
PCNX3
MAP3K11
CHD6
BOD1L1
EIF5
PDCL
DICER1
PCYOX1L
RAB11B
STARD4
SPC25
TXNIP
FBH1
ANKRD16
ISOC2
INTS3
DCAKD
NMT1
TTLL5
ERG28
KRR1
FRA10AC1
DHX8
LTN1
HYLS1
GSK3B
PARPBP
NUP37
ZFAND2A
STIL
TSACC
CCT3
ZBTB9
PMEPA1
WDCP
FKBP1B
PRMT1
MRPL34
DDA1
ABHD8
HNRNPAB
SPRYD3
LCMT1
HAGH
FAHD1
RARS2
ORC3
CDCA8
C1orf109
DLGAP5
TOM1
CLDN9
KMT5C
STAT2
APOF
BRAP
ACAD10
RTRAF
NGDN
ENPP5
FAM72B
KIF20A
BRD8
H3-3B
LAPTM4A
UNK
ASF1B
SETD3
CCNK
SLFN14
TLE3
CYLD
EDEM3
PICK1
H4C15
TRAFD1
FAM156A
FAM156B
USF3
RBM8A
PEX11B
TOGARAM1
KLHL28
RAB3A
SAP30L
GATAD2B
TPD52L2
ABHD16B
TSKS
AP2A1
KCNAB2
MNS1
LETMD1
GFM1
RUVBL1
CDK5RAP3
NUCKS1
ZNF57
SLC2A8
WDR45
PSMA5
CST6
EIF1AD
BANF1
TMED10
LOC102724770
DGCR6
SLC25A28
SNRPA
C19orf54
CCDC77
RUBCN
DGLUCY
RPS6KA5
ARHGAP19
PDIA4
RMI2
TXNL4B
DHX38
ETV5
XPO1
RGMB
STX18
DDX39A
PIP4P1
OSGEP
APEX1
PNP
TPCN1
HIBADH
IQCD
GMNN
NEMP1
UMAD1
ZNF626
KLF6
ANP32E
USP21
PPOX
TTC14
TIMM10
SMTNL1
ALG8
DPH2
ATP6V0B
B4GALT2
CKAP5
VBP1
STK40
UBE2J2
SCNN1D
RRBP1
TMEM248
RBM14-RBM4
RBM14
UTP23
H4C12
H4C11
H2BC15
H2AC15
MCCC1
PPM1B
TTC16
PTRH1
CFAP157
JPT2
PAF1
MED29
ZNF564
HDGF
CREBRF
TMEM97
FBXO5
SF3B5
MRPL24
LAS1L
RWDD1
ARL4D
PMS2
AIMP2
RPL18A
RPS21
CCDC116
SDF2L1
YBX1
CD68
EIF4A1
PHF12
RRN3
ZBTB32
TCTN3
TIMMDC1
RPN2
MROH8
PSMA3
TPX2
FAM204A
KLHL20
BAZ1B
TTBK2
ASPM
GGCT
MDM1
GSTT2B
DDTL
DDT
BAHCC1
GET3
H3C4
THYN1
ACAD8
H4C5
H2BC7
H2AC7
ZMYM5
RTN4IP1
QRSL1
DBNDD2
WDR81
TLCD2
HSD17B12
TXNDC16
ZNF8
CKAP2L
NAT16
MCM10
ZNF695
TIMM23
CALR3
C19orf44
NEK2
GSTT2
OTUD6B
LCN12
FBXW5
C8G
ZCCHC17
SNRNP40
NOL6
RBM15
ARL17B
ARL17A
PLPBP
ESR2
STX16
SLC25A19
MAP3K13
SAMM50
YIPF4
MRPS30
SSBP1
ZNF141
ZNF727
MVK
TMEM45A
GHITM
TPRKB
EAPP
NCOA2
WDR53
FBXO45
PABPN1
CFAP43
C1orf54
AP2B1
PEX12
CIART
ATP7B
ALG11
TMCO1
POP5
TCIRG1
NDUFS8
DCP2
ZBTB6
RC3H2
RAD54L
TRAPPC6B
PNN
MZT1
BORA
PC
CCDC66
MFAP3
FAM114A2
ZNF574
PPP2R5E
SAP30BP
RECQL5
EFCAB6
ALG10B
BPGM
ERI3
GRK6
BUB1
PMF1-BGLAP
PMF1
PRADC1
CCT7
MEIG1
DCLRE1C
DNAJC25-GNG10
DNAJC25
ZNF680
CWF19L1
KBTBD8
FAM117A
ZNF91
ZBTB26
RABGAP1
DAZAP2
FAM222B
EIF3F
RND1
RAD54B
ZNF774
LZTS2
ZNF384
SCAI
TWNK
MRPL43
GPD1
COX14
FRG2
FBXO31
MAP1LC3B
SYS1
FNBP4
WBP2
PTBP1
VASN
VPS4B
LMCD1
PRCC
OXSR1
RRP9
PARP3
KIF1B
OTUD5
ZC3H10
RPL41
ESYT1
PGBD4
EMC7
SYCE1L
OSBPL9
MON1B
EIF3M
FAM83D
EHBP1
RPL37
CARD6
WHAMM
FSD2
KDM4A
H2BC21
H2AC21
H2AC20
BLM
SLC46A3
RBM39
CDC6
SAMD10
PRPF6
RGL2
PFDN6
ANKZF1
WDR46
H2BU1
H2AW
PODNL1
DCAF15
GABPA
ATP5PF
NUDT16
ANXA6
IFT20
DOK3
DDX41
OTUB2
CTNNBL1
TNFAIP1
NF2
CD2BP2
SENP2
RLN2
CAND1
CLNS1A
ATF7-NPFF
ATF7
SZT2
MED8
DNAJC19
IVD
TIPRL
EIF2B2
SELENOK
ACTR8
ZNF830
CCT6B
ZNF408
ARHGAP1
SLC25A32
DCAF13
GINS2
ANAPC15
LAMTOR1
GINS1
FER
GTPBP4
CIT
CCDC200
PA2G4
SIVA1
TYW1
SBDS
TTC33
MTMR11
AAR2
ORC2
SF3B4
CCDC61
C5orf51
HACL1
BTD
PTMA
SLIRP
ALKBH1
UXT
ELK1
ZNF775
UGP2
H4C3
H1-6
PSMA6
NHP2
MYH14
UCKL1
XRCC4
TMEM167A
FRS2
PNKP
AKT1S1
TBC1D17
MBD1
CXXC1
SNRPE
ZNF302
VTA1
NMBR
C22orf39
RLN1
RNF34
KIF18B
TMEM79
SMG5
RPS26
DCDC1
ZNF138
DNAJC24
CBWD5
CBWD3
STARD3NL
CEP164
TFB2M
CNST
GSTO2
NUDT5
CDC123
CANX
RNF181
TMEM150A
TTC31
CCDC142
COQ7
HEXIM2
SCOC
FUT8
KCTD16
YIPF5
TMBIM6
ARL6IP1
FAR1
LOC100421372
HSPA14
CDNF
PUM3
RAB3C
RPS7
SETD5
PARL
ZNRD2
FAM89B
EHBP1L1
ETFDH
C4orf46
MTOR
PSMC3IP
PPIP5K2
PSPH
CCT6A
SLC25A36
SNRNP200
ARAF
MED30
LIN52
ALDH6A1
SF3A3
SFXN5
UQCC1
MFSD11
SRSF2
C6orf89
MMACHC
TESK2
BMS1
TMEM256
PLSCR3
NLGN2
MAT2B
ADAMTS15
MRPS28
FAM53C
CDC25C
SLC39A9
ERH
PFDN5
MYG1
CSTF1
AURKA
OSCP1
DDX50
HJURP
ZNF85
TTK
TMEM183A
COG3
CCNB2
COX16
CCDC174
SCAND1
RPS14
MTA2
TUT1
NUP214
ALG10
TRMT10C
IDI1
WDR37
CDK13