ChIP-Atlas: Target genes

Potential target genes for RARA

Query protein: RARA
Distance from TSS: ± 1 kb  ± 5 kb  ± 10 kb
Sort key: SRX21236748 | IMR-32
 
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  1000 750 500 250 1 0  (Values = Binding scores of MACS2 and STRING)

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Links: Movie and Document for ChIP-Atlas Target Genes
RARA's Target genes

◢ RARA: Average

◢ SRX2748853: Adenoid cystic carcinoma

◢ SRX2748855: Adenoid cystic carcinoma

◢ SRX10442515: BE(2)-C

◢ SRX8814860: BE(2)-C

◢ SRX2635935: Hep G2

◢ SRX2635936: Hep G2

◢ SRX25244558: hESC derived endodermal cells

◢ SRX25244559: hESC derived endodermal cells

◢ SRX25244560: hESC derived endodermal cells

◢ SRX25244561: hESC derived endodermal cells

◢ SRX21236745: IMR-32

◢ SRX21236746: IMR-32

◢ SRX21236747: IMR-32

◣ SRX21236748: IMR-32

◢ SRX3584302: iPSC derived chondrocytes

◢ SRX3584303: iPSC derived chondrocytes

◢ SRX3584304: iPSC derived chondrocytes

◢ SRX3584305: iPSC derived chondrocytes

◢ SRX3584306: iPSC derived chondrocytes

◢ SRX3584307: iPSC derived chondrocytes

◢ SRX3584308: iPSC derived chondrocytes

◢ SRX3584309: iPSC derived chondrocytes

◢ SRX3584310: iPSC derived chondrocytes

◢ SRX3584311: iPSC derived chondrocytes

◢ SRX3584312: iPSC derived chondrocytes

◢ SRX3584313: iPSC derived chondrocytes

◢ SRX6039037: iPSC derived chondrocytes

◢ SRX6039038: iPSC derived chondrocytes

◢ SRX6039039: iPSC derived chondrocytes

◢ SRX6039040: iPSC derived chondrocytes

◢ SRX6039041: iPSC derived chondrocytes

◢ SRX6039042: iPSC derived chondrocytes

◢ SRX3584300: iPS cells

◢ SRX3584301: iPS cells

◢ SRX19662659: Ishikawa

◢ SRX19662660: Ishikawa

◢ SRX4671297: NAMEC8

◢ SRX4671298: NAMEC8

◢ SRX4671299: NAMEC8

◢ SRX014752: NB-4

◢ SRX014770: NB-4

◢ SRX17639399: NB-4

◢ SRX17639400: NB-4

◢ SRX17639401: NB-4

◢ SRX17639402: NB-4

◢ SRX8814876: Neuroblastoma

◢ SRX9607665: NTERA-2

◢ SRX9607666: NTERA-2

◢ SRX1035586: SK-N-SH

◢ SRX1035587: SK-N-SH

◢ SRX1035588: SK-N-SH

◢ SRX1035589: SK-N-SH

◢ SRX4671312: SUM 159PT

◢ SRX4671313: SUM 159PT

◢ SRX4671314: SUM 159PT

◢ SRX19662634: T-47D

◢ SRX19662636: T-47D

◢ SRX682379: TSU-1621MT

◢ SRX014781: UPR9

◢ SRX014782: UPR9

◢ RARA: STRING

FAM187A
EFTUD2
CCDC103
NUP85
RWDD1
MRPS7
MIF4GD
GGA3
GOSR2
HADHB
HADHA
TAOK3
SUDS3
ZNF335
PSMD12
NVL
NNAT
BLCAP
RABL2A
TSN
RABL2B
RPS12
SLC35B1
CACTIN
MAPKAPK5
TSNAX
POLR2E
GPX4
HSPA9
NME6
C19orf48
USP29
VDAC2
PNO1
POLR3F
DZANK1
RABGGTB
SEC61B
COX7A2L
RBBP5
VTI1B
PSMD1
SART3
ISCU
NUP205
ZRANB2
PAK1IP1
C6orf52
FARSB
FAM104A
C17orf80
RPS27A
CLHC1
STAM
REXO1
EXOSC5
BCKDHA
USP1
NFKBIL1
DDX39B
ATP6V1G2
SELENOF
HS2ST1
S1PR4
NCLN
LYRM4
FARS2
PSMG2
CEP76
DNAJB7
XPNPEP3
ST13
PI4KB
PES1
DCTN1
CAPRIN1
UFM1
LOC102724770
DGCR6
TTC8
UPF2
GOLGA5
COMMD1
CCT4
RPL21
NDUFA4
SUPV3L1
C6orf47
APOM
BAG6
RPL35A
IQCG
LMLN
ZNF576
IRGQ
OAZ3
TMED1
SMC2
VARS1
ATP5MG
DYNC1LI2
SUCLG1
HSPA1B
PCBP1
TLE6
RPS23
ATP6AP1L
STAM2
ANAPC7
MRPL11
TBCK
AIMP1
SFI1
EIF4ENIF1
PROSER1
NHLRC3
MRPS5
SKP1
UNKL
C16orf91
RPS29
LRR1
DUX4
SRD5A1
NSUN2
ADK
AP3M1
ETAA1
ICE1
ACTR10
DPH6
CDC73
GORAB
PIP4P1
OSGEP
APEX1
IPO13
PDAP1
BUD31
MAMDC2
STK36
RNF25
TM9SF1
IPO4
TSSK4
RPS10-NUDT3
RPS10
CCDC43
TMEM101
PIN4
OR6B2
NDUFA10
TAF9
RAD17
AK6
RPN1
KAT7
PAF1
MED29
GADD45GIP1
MLEC
KIAA1549
RBKS
BABAM2
AQP6
SF3B3
COG4
DUSP12
AXDND1
ARHGAP11A-SCG5
ARHGAP11A
EML2
PTGES2
GTF3C4
DDX31
ZNF585B
ZNF383
MRTO4
EMC1
SEC11C
EIF2S3
TRIM65
MRPL38
PCGF1
LBX2
TLX2
NPTN
SPCS1
GLT8D1
CHGA
NPTX1
SMLR1
KLHDC8A
RPL7
RDH10
BICRA
IGFBPL1
CNPY2
MYCN
PFKP
OPRM1
TCHP
ADAMTS8
PCNX1
CRYBG3
PTPRO
UBE2I
RPS24
POLR3A
ACOT11
BDNF
BAHCC1
XKR7
SLC22A23
WRAP53
TP53
IER5
QPRT
TRIM2
RBM25
NRP1
CHD8
NCS1
CCDC68
DDX1
WDR74
STX5
PLEKHA6
NRXN1
SRSF11
LRRC40
NKX6-2
B9D1
MFAP4
MAPK7
HSPE1-MOB4
HSPE1
HSPD1
APBA1
DR1
SYBU
NFATC4
METTL25
CCDC59
ACVR1
XXYLT1
GPR88
GMEB2
SNX1
CIAO2A
HSD17B1
COASY
GHRL
LAYN
SNRPD2
QPCTL
CRHR1
ST6GALNAC3
TSPAN11
DPYSL5
JDP2
FAM162A
CCDC58
MYOG
DHX8
LIMA1
GAMT
RBP1
FBF1
CHN2
CPVL
VWA3B
EIF4H
MBOAT2
PPP1R35
ALKBH5
C9orf92
ZCWPW1
MEPCE
VSTM2A
INKA2
KCNN3
MMD
KIF3B
CDH2
GRK5
UNCX
TBC1D24
TEDC2
NTN3
NELFA
RFX2
OCA2
SYTL3
DYNLT1
CAPRIN2
ARSG
LOC283710
LY75-CD302
LY75
GBA
ST6GALNAC2
CXCR4
OMD
SLC17A6
CS
EAPP
BCAT2
ATP6V1G3
SLC6A2
GTF3A
PKN2
MAD2L1BP
SECTM1
GTPBP2
RSPH9
TOMM20
DVL3
ANO3
SPZ1
TMC8
TMC6
SLC35A3
CDON
KLF7
MEGF6
EGFLAM
SSTR2
R3HCC1
LRRC43
IL31
CD9
ATP1A1
MYLIP
SMIM28
PPP1R18
NRM
CCDC200
HEPACAM2
VPS50
MTRNR2L8
DLC1
CHST8
CCN6
HNRNPA2B1
CBX3
TRAF7
RAB26
BMERB1
ARID3B
CRABP2
ANKLE2
GOLGA8R
H3Y1
ARHGEF3
HUS1
NFE2L1
TCP1
MRPL18
COPZ2
RFX8
CBFA2T2
PHB
PCGF3
ELAPOR1
CNBD2
C1orf194
CDK18
TOB1
SAMD10
PRPF6
NPR2
PDHX
APIP
TM6SF2
MAP3K14
RUNX1T1
CHN1
TBX2
CYTH3
TCAF2
RARA
RAB27B
CDK15
TSHR
XRCC5
HECTD3
PRSS55
CCDC33
ZBTB18
TECTA
SLC26A1
IDUA
KIF18B
PRRT2
PAGR1
MVP
TLX3
RASD2
TIAM2
CILP
RUNDC3A
IL6ST
PACS2
BRF1
PLEKHA5
AKNAD1
AFF3
MLF2
BRD4
MAN2C1
H3Y2
CD74
CDYL
GK2
PRPF3
TIAF1
CDO1
KCNS2
RXYLT1
RNASEK
ALOX12
TXNDC11
CPD
ABCA4
BCAR3
DPYSL3
NAV1
VMP1
PTRH2
ARL17B
CLTC
RPP38
TNFRSF19
TPCN1
ANK3
AKT1
ACVR1C
SSH1
KREMEN1
SMYD3
RHBDF2
DENND4B
IZUMO1R
SLC39A1
CRTC2
PLSCR5
IFI16
PYDC5
SLC26A11
USP9X
TAS2R40
SNN
CDC42EP2
PRDM10
ASXL2
KRTAP3-2
KRTAP3-3
KRT40
MTRNR2L1
PSMD6
SLC25A10
MRPL12
PRKN
PACRG
SERTAD3
SYCP3
MTF2
UFSP2
C4orf47
COMT
TXNRD2
NHLH2
FRA10AC1
CERK
SMARCD2
SLC16A10
RALYL
FRG2C
BMF
LGSN
PTPN6
C12orf57
KTI12
SYNPO
FAM222B
CDAN1
FXYD6-FXYD2
FXYD6
MYL4
SCHIP1
UNC5A
TMEM250
CLMN
CSRNP3
CIPC
SMAD5
CYP27C1
HAND1
SORBS2
RAD23A
CALR
FARSA
F7
BTBD8
RPS7
RGS3
TUBB
MDC1
C8B
TWIST1
C1orf185
ANKFN1
FRMPD1
GASK1B
NES
PDZRN3
IFI35
RPL27
RP1L1
SUN1
DIS3L2
KIAA0319
SLC35E3
METTL2A
DOCK10
NEDD4L
DNAL4
ZNF397
LEMD2
SECISBP2L
SF3B2
GAL3ST3
PLAC8L1
ID2
SH2B1
MTMR1
PAXBP1
PELI2
MGARP
ZNF608
NAV2
SPATA4
AIG1
NCOR2
DDX23
FRMD4A
UBALD1
MGRN1
UHRF1BP1
B3GNT3
ZBTB26
RABGAP1
ARRDC4
SLIT1
FRZB
SMAD9
PHOX2B
HMCN2
COL23A1
RIMS3
EFNB1
BRWD1
SLC47A1
FRMD6
GGA1
DGUOK
RARB
MRTFA
UBR5
ZNF785
TRIM67
CCDC167
GRIP1
LRATD1
IGDCC4
MAD2L2
DRAXIN
NCR2
CCDC192
TLN1
CREB3
ARIH1
CRMP1
MMAA
TMEM63B
MRPL14
SNAPC1
CMTR1
RBMS3
THSD7A
CACNA1G
CTNND2
MRPL27
EME1
TNFAIP2
MBD6
DDIT3
DGKZ
SEMA6D
MAST1
RTBDN
FABP9
ADCYAP1R1
P3H2
PMP2
SH3D19
TRDMT1
LRRC4
LDB3
STK32B
SULF2
TMIGD2
FSD1
PLEKHM1
SATB1
RNF144A
GSTP1
STAT3
FYN
SPOP
RPAIN
NUP88
LOXL1
PLA2G12B
NBEA
MAB21L1
CACHD1
BIRC6
HCFC2
GLT8D2
WNT8B
SEC22B
AMZ2
RIMBP2
PRKCSH
CCDC151
SLC12A5
ADNP
DNAJC22
LYSMD2
EFCAB2
RUNDC1
PTGES3L-AARSD1
PTGES3L
ARHGAP19
GRAMD1B
DCT
CHD7
CDH7
CRABP1
KIF19
TIMP2
OSBP2
ZCCHC4
KAT2B
MAPK13
GCHFR
RMDN3
C15orf62
SRP9
SHMT2
NDUFA4L2
GIT1
ANKRD13B
RABGAP1L
EYS
FAM43A
ARL4D
ARID2
CA11
TANC1
BAZ2A
ATP5F1B
PANK2
PXYLP1
ARMC12
FKBP5
FRG2
CD79A
ARHGEF1
CD180
MTMR14
ARL14EP
CENPBD1
TIMM10
SMTNL1
C11orf96
NUMBL
ZSWIM1
SPATA25
NEURL2
CTSA
RNF34
SLC29A4
LRRC53
BAIAP2
ELF1
WBP4
DCUN1D4
SLC1A2
SLA
FGD4
MEIS3
SKIL
CLASP2
EBF3
HSPB1
CBX5
WDR7
SLAIN1
CEP120
ANKDD1B
HMGB1
USPL1
DNAJC15
UQCRC2
LZTS2
PAN2
IL23A
DENND1B
MTMR6
NUP58
PDE12
TEDC1
PHRF1
CRIP1
FBXO46
CHRND
NRG1
RNF32
MEIOSIN
CRIP2
SMYD1
P3H3
CHRNG
RAB31
GNB3
RAB13
RPS27
KCNV2
BRINP3
ABHD2
NOCT
B3GNT2
SNRPE
UGP2
AFMID
RCOR1
GPRIN3
COL25A1
PROKR1
CDC42EP3
FRY
PHLPP1
TMEM107
ZNF76
TRIOBP
MSRB2
NET1
BAZ2B
SEPTIN6
DDR1
KDM3A
SSNA1
ANAPC2
CAPNS2
UBAP2
PSAP
KCNK2
PDGFRA
CECR2
CDK6
DISP2
PTPN13
PHGR1
TMEM244
POLDIP3
SPHK2
CNNM2
RPL18
FAM83E
GDAP1
SMIM41
ATG101
PRPSAP1
CAPN10
METTL24
PARP16
FBXO22
TLE4
FOXP2
GMPPA
ASIC4
PCBD2
CCDC174
PCLAF
TRIP4
ZNF438
SPSB4
SOAT2
IGFBP6
RPL26
KRBA2
ZNRF3
IL18BP
ARHGEF25
DTX3
SLC22A15
PRICKLE1
PRCD
CYGB
AHCYL2
COLQ
TSPAN5
ARHGDIB
PANK3
DDX20
TESC
HMGA1
RFTN1
MCL1
SMG7
MEMO1
CENPM
LIG3
ZNF503
NEUROG2
ZGPAT
ARFRP1
PPP1R1B
NEUROG3
PDE6B
HES1
HOXA3
MTRNR2L2
MSH3
DHFR
ARF1
ICMT
HES3
HOXA4
WNT1
HOXA1
ID1
DUSP29
CDX2
NOTCH2NLC
MBTPS1
DHRS3
LARP7
GLRA1
SP2
VEZT
FGD6
FZD8
CYP26A1
NOTCH2
SPATC1L
ARHGAP10
NR2F1
PLAGL1
NFE2
G6PC2
PMAIP1
IER3
FLOT1
HOXA2
PALM2AKAP2
PDE4DIP
DUSP6
MUC20
H2BU1
H2AW
ZNF775
NEUROD1
NDUFS7
ZP4
SERINC5
KCNN4
NEUROG1
ATOH1
RAB11FIP1
DPP9
IGFBP2
LZTS1
KAT6B
BNIP3
TBL2
ZFHX4
TPM1
ERCC1
GPR108
LEFTY2
BBS9
BHLHE40
LBX1
TRIP10
CDH18
TLE3
DDAH1
FOXP1
ERRFI1
VSIR
HOXB1
NBAS
TTI2
ARHGDIA
ST18
LIN28A
TBX3
HOXA5
INSM1
P4HB
TLE2
ZNF746
ETS1
PHC2
CDCA7L
ASB2
FAM222A
TEPSIN
NDUFAF8
LPIN1
NBEAL2
CCDC12
ARHGAP24
FGF19
ADAM18
DAPL1
DNM2
TPRA1
PAH
ARID3C
NCOA7
NHS
TAF12
CITED2
HOXB3
RHBDD3
EWSR1
S100A10
SLC39A7
RXRB
HSD17B8
ADNP2
DLL4
PPP6R3
HOXC4
CRYAA2
CRYAA
SP1
PRUNE2
FBXO31
URM1
HPD
MINDY2
SP5
FILIP1L
EXOC2
MAP1LC3B
TMEM70
ELOC
DCTN3
H2BC17
H2AC17
CCN1
ANKRD28
COL11A2
SMAD3
HPCAL1
PDHB
CNTN1
ANK2
NFIA
ZFHX3
KIF21B
PKDCC
CLGN
RPL22
RNF207
FXYD2
DLX4
FABP7
STX18
NPAS4
E4F1
CAMTA1
RAB5B
PMEL
CDK2
PPFIBP2
ID3
ITGB6
STAP2
TLE1
ARHGEF28
TMEM242
MRPL34
DDA1