ChIP-Atlas: Target genes

Potential target genes for RARA

Query protein: RARA
Distance from TSS: ± 1 kb  ± 5 kb  ± 10 kb
Sort key: SRX014782 | UPR9
 
Color legends
  1000 750 500 250 1 0  (Values = Binding scores of MACS2 and STRING)

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Links: Movie and Document for ChIP-Atlas Target Genes
RARA's Target genes

◢ RARA: Average

◢ SRX2748853: Adenoid cystic carcinoma

◢ SRX2748855: Adenoid cystic carcinoma

◢ SRX10442515: BE(2)-C

◢ SRX8814860: BE(2)-C

◢ SRX2635935: Hep G2

◢ SRX2635936: Hep G2

◢ SRX25244558: hESC derived endodermal cells

◢ SRX25244559: hESC derived endodermal cells

◢ SRX25244560: hESC derived endodermal cells

◢ SRX25244561: hESC derived endodermal cells

◢ SRX21236745: IMR-32

◢ SRX21236746: IMR-32

◢ SRX21236747: IMR-32

◢ SRX21236748: IMR-32

◢ SRX3584302: iPSC derived chondrocytes

◢ SRX3584303: iPSC derived chondrocytes

◢ SRX3584304: iPSC derived chondrocytes

◢ SRX3584305: iPSC derived chondrocytes

◢ SRX3584306: iPSC derived chondrocytes

◢ SRX3584307: iPSC derived chondrocytes

◢ SRX3584308: iPSC derived chondrocytes

◢ SRX3584309: iPSC derived chondrocytes

◢ SRX3584310: iPSC derived chondrocytes

◢ SRX3584311: iPSC derived chondrocytes

◢ SRX3584312: iPSC derived chondrocytes

◢ SRX3584313: iPSC derived chondrocytes

◢ SRX6039037: iPSC derived chondrocytes

◢ SRX6039038: iPSC derived chondrocytes

◢ SRX6039039: iPSC derived chondrocytes

◢ SRX6039040: iPSC derived chondrocytes

◢ SRX6039041: iPSC derived chondrocytes

◢ SRX6039042: iPSC derived chondrocytes

◢ SRX3584300: iPS cells

◢ SRX3584301: iPS cells

◢ SRX19662659: Ishikawa

◢ SRX19662660: Ishikawa

◢ SRX4671297: NAMEC8

◢ SRX4671298: NAMEC8

◢ SRX4671299: NAMEC8

◢ SRX014752: NB-4

◢ SRX014770: NB-4

◢ SRX17639399: NB-4

◢ SRX17639400: NB-4

◢ SRX17639401: NB-4

◢ SRX17639402: NB-4

◢ SRX8814876: Neuroblastoma

◢ SRX9607665: NTERA-2

◢ SRX9607666: NTERA-2

◢ SRX1035586: SK-N-SH

◢ SRX1035587: SK-N-SH

◢ SRX1035588: SK-N-SH

◢ SRX1035589: SK-N-SH

◢ SRX4671312: SUM 159PT

◢ SRX4671313: SUM 159PT

◢ SRX4671314: SUM 159PT

◢ SRX19662634: T-47D

◢ SRX19662636: T-47D

◢ SRX682379: TSU-1621MT

◢ SRX014781: UPR9

◣ SRX014782: UPR9

◢ RARA: STRING

ARID3B
ATP8B4
CPNE5
SPATC1
TMEM104
NAT9
PDP2
NADK
HIP1
ZNF718
ZNF595
H6PD
ARHGEF3
AGTRAP
RHBDF2
CRYBG1
SERPINB13
ZFYVE28
CFAP99
PSTPIP1
RNF157
FXYD2
DSCAML1
AHNAK
EFHD2
NDRG1
GFI1
CREB3L2
SEPTIN9
RUBCNL
NDUFA4
TGM3
DENND3
JAK3
RPL18A
CCDC102A
ADGRG5
RNF149
SH3BP2
CXCR3
LTB4R2
LTB4R
CIDEB
NIBAN3
PLEKHO2
PRKCD
SEC14L1
LDLRAP1
HRH1
NDUFS6
MRPL36
RNF130
STING1
DCSTAMP
SCAMP4
ADAT3
ABHD17A
FLI1
CYTH4
CD93
GNGT2
ABI3
PPP1R18
NRM
DHX16
POLR2E
GPX4
RUNX1
NAA10
ARHGAP4
TMEM53
ARMH1
SEMA4D
MAP1S
LAPTM5
MYO1F
SPG7
TOX2
USP3
TGM6
ADAP1
CAPG
FURIN
RNPEPL1
DUSP28
ANKMY1
SMIM3
TEAD3
ANXA6
LZTS1
INAVA
FOXP1
FGR
LYN
SKI
CHST12
TNFRSF1B
NFE2
DUSP6
PADI1
PPCDC
TMC8
TMC6
ARL5C
CBFA2T3
ZFP91
LPXN
ATP13A2
SLC38A10
CCDC9B
ARID2
CD82
SYNJ2
BCL2A1
TCTEX1D4
PLK3
BTBD19
ERLIN2
C16orf54
PRRC2A
AIF1
RASSF2
MAP1LC3B2
KRT80
ADGRE5
ADORA2A
GNA15
RFX8
RFTN1
VASP
PLEC
TRABD2A
ITGAL
CUEDC1
DOCK9
DYRK1A
RPS6KA1
UPP1
KCNK5
ATG16L2
TAF15
MMP28
KCNAB2
SMG6
RASA3
TRIM69
RET
SDSL
MLNR
CHSY1
ARHGEF25
DTX3
CCL1
CCL13
WDR74
STX5
STX1A
CAMK1
PFN3
F12
S100A6
S100A5
S100A4
TMEM71
S100A3
IER3
FLOT1
STAB1
SLC37A2
HOXC6
HOXC5
CPXM1
TNFRSF14
RNASEH2B
ARHGAP45
KHK
EMILIN1
OST4
EXOSC4
GPAA1
NCF1
TRIM46
KRTCAP2
NDUFV1
HUS1
STXBP1
IFNLR1
TNFSF14
NR1D1
TES
TRAF3IP3
CD38
BHLHA15
FMNL3
IQSEC2
RAPGEF1
ARHGEF2
GYPC
TMEM239
C20orf141
C2orf42
NLRP3
LFNG
MYEOV
ETV5
SCAMP2
ZNF740
CSAD
CCND3
LAT2
OLIG1
BIRC3
PARP2
CCNB1IP1
ASB2
NGRN
KIAA0513
MLXIP
UBC
HNRNPF
RHOQ
ATP6V1E2
KCNIP1
TXNRD1
RELT
FAH
ARRB1
CD83
KDM4B
SLC22A18
PHYKPL
CLEC3B
MAP3K5
MBD6
DDIT3
STK10
STN1
C1orf127
KBTBD11
FMNL1
LILRB5
LILRB3
LILRA6
FAM180B
C1QTNF4
RAB11FIP1
HCK
IL22RA2
CSRNP1
LRTM2
MACC1
SIAH3
GTF3A
DGKZ
CHST13
S100A2
SH3TC2
MAPKAPK3
CISH
ID1
NBEAL2
CCDC12
MAPRE2
ZP3
SSC4D
GPR25
RPS9
ADORA2B
STARD3NL
C3
TNFRSF1A
CXCL8
SLC43A3
PILRA
WBP2
UNC13D
PDCD6IP
PPFIBP2
E2F2
ANKRD33
PLEK
ALOX5AP
FKBP5
RLN3
IL27RA
PES1
TCN2
PLCB2
SLC7A6
CCDC174
PECAM1
TMEM151B
SLC35B2
NFKBIE
HOXA1
IQGAP2
SLC6A6
GET1
PTK2B
TMBIM6
NCR3
LTB
LST1
AMPD3
TFDP1
CD300LF
NFKBID
TYROBP
HCST
RAC2
CGAS
MAD1L1
MTO1
NCF2
OR4D1
CCL2
CALHM3
IGFBP4
SSTR4
ABHD2
INKA1
CDHR4
UBA7
TBC1D14
PTPN6
C12orf57
SMIM35
TMPRSS4
CYFIP2
ARHGAP39
MDFI
TBL2
PDE4B
SLC25A19
PLA2G5
IL32
AKNA
TMEM255B
CEACAM4
F11R
SLC1A5
MAST2
RXRA
USP4
PHF20
LAIR1
BCL3
NUP210
NNT
DUX4
AGO2
DENND2D
RNF165
RASA4
MTRF1L
MB
TMIGD3
NRGN
ADORA3
ANKRD13D
MICALL2
RGS12
DUSP3
CFAP97D1
ITGB2
RAP1A
IFITM3
ENO1
CTDSP2
RAB37
FBXO41
EGR4
FCGRT
SERPINE1
SCHIP1
LTBP3
P2RX7
ENG
B3GNTL1
LRP3
RBM47
CEBPE
RAP1GAP2
SPN
SUPT4H1
NOS3
GPR183
TRABD
SELENOO
IGFBP7
PPARG
PHF19
TNS3
RASGRF1
MFSD8
ABHD18
PDE6B
MINDY2
ARIH2
RNF166
CTU2
FOSL2
CASP8
ARHGEF18
TM9SF4
PAG1
THEMIS2
CSF1R
ICAM1
STC2
OCSTAMP
SLX1B
SLX1A
BOLA2B
BOLA2
CORO1A
CLIC1
NIBAN2
DDAH2
MPIG6B
LY6G6C
MGAT4B
LTC4S
NOD2
VAMP2
PER1
SLC9A3R1
BMF
TBC1D10C
PPP1CA
CARNS1
HEXA
ITGAM
PLAAT2
VPS26C
HOXC4
VAMP8
VAMP5
DOT1L
DNAH7
CD1C
PSD4
PTPN22
PEX14
DFFA
RGCC
DYNC1LI2
UBXN10
PLA2G2C
PRR5
RAB27A
GPR108
TRIP10
IL6R
FCHSD2
CENPH
IVD
HLA-E
ASCL2
FGGY
TIMP2
CIITA
ERG
OPN1MW3
OPN1MW2
OPN1MW
CCDC200
TMEM123
AIPL1
PITPNM2
MYADM
DBN1
TMEM72
TUBA4B
TUBA4A
STK16
GLB1L
TNFRSF10B
BID
VASH1
VAV1
SH2D3A
GPATCH8
GSE1
STAU2
RNF40
CCDC189
SPDYE13
SPDYE9
SPDYE8
SPDYE15
SPDYE11
C16orf74
TPD52L2
ABHD16B
DGKD
PKIG
YES1
CHN2
CPVL
CYP2W1
COX19
TPPP3
TRAF1
S100P
DIS3L
SLC26A11
INSIG1
NFKBIA
NID1
PTP4A2
ARID1A
TBP
PSMB1
MAFF
RPS14
ARHGAP30
CACNB4
LIMK1
HPCAL1
TLK2
ZNF414
SLC22A4
EVPLL
ORAI1
ICAM2
PARP10
GPR132
GFRA4
BHLHE40
ATXN1
CELF2
EVPL
RHOH
TSPAN14
MAD2L1BP
GTPBP2
ALDH2
FXN
PHC2
CMKLR1
MRPL34
DDA1
ABHD8
TMEM268
TP53AIP1
FCRL4
ABCG1
ROPN1L
SLC19A1
CRYGC
ZDHHC18
SH2B1
ATP23
KLHL36
CCR5
CCR2
BAZ1B
DRD4
NEK6
SPDYE17
ARPC1B
TNFRSF4
TNFRSF18
LGALS12
SH3BGRL3
KCNJ15
TUBA8
RNASET2
MELTF
PPP1R13B
CDK5R1
DHRS12
TRPM2
LCP2
PAFAH2
ITGAD
RAB10
SIRPB2
TMEM187
HCFC1
PRDM1
ERAP1
P2RY6
QKI
CLN8
ZBTB25
ZBTB1
XYLT1
GLRX
CDCA7L
GMCL2
GOLGA8Q
RTN4
SPATA1
GNG5
PIK3IP1
CD300A
PLEKHO1
GNPTAB
SNX20
CEACAM21
RARA
RASGRP2
LMO2
TP53I11
SLC22A16
NBPF1
FCER2
NINJ2
PPP1R11
POLR1H
RNF39
HSH2D
SFI1
EIF4ENIF1
TTI2
P2RX1
PIK3AP1
SYNE3
CHD4
CD300C
RASA4B
MYO18A
HK3
PMAIP1
UBALD2
S100B
LAMB3
TSC22D3
SOAT2
IGFBP6
SLC9A5
FHOD1
ZNF732
HSPA1B
HSPA1L
HSPA1A
PSAP
LMNA
SRCAP
LOC730183
ADAMTSL4
DHRS3
ZNF22
GHRL
RGS3
RXFP4
KHDC4
ECE1
COLQ
PODXL2
IL4I1
INPP4A
GM2A
LDLR
NUDT1
MRM2
EPB41
SSBP3
PNRC2
MSH5
PSCA
JRK
C4orf17
RFX2
TNIP1
FAM13B
PCNA
CDS2
COL4A2-AS2
APBB1IP
ARL4D
PIKFYVE
MYO1G
IFNGR1
PLAU
TMEM121B
BATF
GPR35
TSPAN32
C11orf21
RHOG
SPDYE6
LOC100289561
FOXP4
LCK
FAM167B
FABP6
HCRT
KCNH4
GHDC
DCTN4
TIGD6
HMGXB3
DDX6
GRK2
SPATA12
CDCA4
ZNF652
PIK3CG
DYNC2I1
CISD3
PLEKHG3
LRRC71
IFI16
CTSD
ANTXR2
DAP
ZNF683
EVL
KAZALD1
TECPR1
TCIRG1
NDUFS8
CAMKK1
FASTKD1
H2BU1
H2AW
FBXO31
MAP1LC3B
MRPS15
POM121
SPDYE7P
PRNP
OSCP1
PLXND1
TMPO
CTSH
SPHK1
ABTB1
SYT8
TNNI2
FTH1
LSP1
SQSTM1
ZNRD2
FAM89B
EHBP1L1
CARS1
ST3GAL1
FLVCR2
PCTP
ASIC3
CCPG1
C15orf65
C11orf24
SLC17A9
DCHS1
KIF21B
CSK
LYSMD2
CLIC4
ZNF575
ETHE1
BPI
ANP32E
MEF2C
GSR
SPDYE21
IGF2BP3
MICAL1
RHBDF1
MPG
ADA
TANK
FOS
ACKR2
HIGD1A
MYBPC3
CPT1A
RIOK3
KISS1
MEF2D
C11orf86
MAP2K3
FAM110A
ALDH3B1
UNC93B1
CCDC149
C5AR2
ZDHHC3
EXOSC7
CXCR5
CIBAR2
MALL
SMARCD2
TATDN1
NDUFB9
RAB8A
MOB2
ARSG
TLR9
DTX2
NGFR
ZNF438
RRM2B
LRRC25
H2AB3
H2AB2
H2AB1
F8A3
F8A2
F8A1
NOL4L
CEBPA
SPDYE16
LGALS1
CCDC69
CRTAP
HNRNPL
ITGA5
ADGRE2
MARS1
ARHGAP9
C3orf86
CITED4
BCL2L13
RBAK-RBAKDN
RBAK
SNRPA
C19orf54
ZFP36L2
TMEM39B
IRF5
LDHD
FCRL6
OAS2
RASSF5
TNFRSF10C
ABCA7
SLC16A5
FLNA
LMBR1
ITGA3
PNISR
NLRP12
POLDIP3
PNKD
GUSB
KSR1
ITPKA
PRAM1
FES
UBE2J1
TRIM41
DOCK10
IKZF1
FHAD1
LAIR2
BEGAIN
MOB3A
IZUMO4
CLDN9
TUBA1C
CLDN6
CPQ
RIPOR1
AGTPBP1
GAS6
SYTL3
RUFY1
HOXA3
HOXA4
HOXA5
TGFBR2
FAM219A
DNAI1
AKR1A1
DNAJC16
CASP9
PXT1
KCTD20
RRP12
FAM229A
TSSK3
DHX37
BRI3BP
TGM5
ESRRA
CATSPERZ
SASH3
SDE2
UBL4B
PKN1
KCTD12
PIWIL4
SH2D3C
CDK9
SLCO4C1
PRSS22
NCOA4
FADS2
PNPLA6
BRI3
EIF4E3
ZNF276
VPS9D1
SMCO4
SYNCRIP
EEF1AKMT4-ECE2
EEF1AKMT4
ALG3
FSTL3
TUBB3
MC1R
PPM1L
NPRL2
CYB561D2
ZMYND10
RASSF1
TMUB1
FASTK
AGAP3
GPR18
SP1
TSPAN16
TPST2
TNFSF9
ARID5A
SBF1
LRFN2
IL17RE
ZSWIM1
SPATA25
NEURL2
CTSA
GNB2
NRG4
AURKAIP1
MXRA8
PXN
MEFV
GLIPR2
EFCC1
CFAP92
CCL3L3
CCL3L1
LRCH4
FBXO24
ZASP
SAP25
NT5C2
GMEB2
SYPL1
RARG
IL16
S100A8
AVPR2
PARL
INPP5B
PPP6R1
GNAI2
UBE2R2
ARHGAP25
SV2A
CLEC12A
GOLGA8M
MRPS23
GNA12
ACTR3
EMC8
COX4I1
SPG21
ONECUT3
IFITM2
IFITM1
IFITM5
GSN
GAD1
SERPINF1
MTFP1
GOLGA8O
IRF2BP2
SH3BP1
OAF
CD244
EML2
LONRF3
INTS5
GANAB
CAPN2
VPS18
CBL
NCF4
UNCX
SHH
INTS10
STOML1
FOXN1
TNIP3
GNG7
RBKS
BABAM2
MAP3K2
CLN6
MYOM2
TMEM204
ACOX2
NBR1