ChIP-Atlas: Target genes

Potential target genes for RARA

Query protein: RARA
Distance from TSS: ± 1 kb  ± 5 kb  ± 10 kb
Sort key: SRX19662659 | Ishikawa
 
Color legends
  1000 750 500 250 1 0  (Values = Binding scores of MACS2 and STRING)

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Links: Movie and Document for ChIP-Atlas Target Genes
RARA's Target genes

◢ RARA: Average

◢ SRX2748853: Adenoid cystic carcinoma

◢ SRX2748855: Adenoid cystic carcinoma

◢ SRX10442515: BE(2)-C

◢ SRX8814860: BE(2)-C

◢ SRX2635935: Hep G2

◢ SRX2635936: Hep G2

◢ SRX25244558: hESC derived endodermal cells

◢ SRX25244559: hESC derived endodermal cells

◢ SRX25244560: hESC derived endodermal cells

◢ SRX25244561: hESC derived endodermal cells

◢ SRX21236745: IMR-32

◢ SRX21236746: IMR-32

◢ SRX21236747: IMR-32

◢ SRX21236748: IMR-32

◢ SRX3584302: iPSC derived chondrocytes

◢ SRX3584303: iPSC derived chondrocytes

◢ SRX3584304: iPSC derived chondrocytes

◢ SRX3584305: iPSC derived chondrocytes

◢ SRX3584306: iPSC derived chondrocytes

◢ SRX3584307: iPSC derived chondrocytes

◢ SRX3584308: iPSC derived chondrocytes

◢ SRX3584309: iPSC derived chondrocytes

◢ SRX3584310: iPSC derived chondrocytes

◢ SRX3584311: iPSC derived chondrocytes

◢ SRX3584312: iPSC derived chondrocytes

◢ SRX3584313: iPSC derived chondrocytes

◢ SRX6039037: iPSC derived chondrocytes

◢ SRX6039038: iPSC derived chondrocytes

◢ SRX6039039: iPSC derived chondrocytes

◢ SRX6039040: iPSC derived chondrocytes

◢ SRX6039041: iPSC derived chondrocytes

◢ SRX6039042: iPSC derived chondrocytes

◢ SRX3584300: iPS cells

◢ SRX3584301: iPS cells

◣ SRX19662659: Ishikawa

◢ SRX19662660: Ishikawa

◢ SRX4671297: NAMEC8

◢ SRX4671298: NAMEC8

◢ SRX4671299: NAMEC8

◢ SRX014752: NB-4

◢ SRX014770: NB-4

◢ SRX17639399: NB-4

◢ SRX17639400: NB-4

◢ SRX17639401: NB-4

◢ SRX17639402: NB-4

◢ SRX8814876: Neuroblastoma

◢ SRX9607665: NTERA-2

◢ SRX9607666: NTERA-2

◢ SRX1035586: SK-N-SH

◢ SRX1035587: SK-N-SH

◢ SRX1035588: SK-N-SH

◢ SRX1035589: SK-N-SH

◢ SRX4671312: SUM 159PT

◢ SRX4671313: SUM 159PT

◢ SRX4671314: SUM 159PT

◢ SRX19662634: T-47D

◢ SRX19662636: T-47D

◢ SRX682379: TSU-1621MT

◢ SRX014781: UPR9

◢ SRX014782: UPR9

◢ RARA: STRING

SPATC1L
TEPSIN
NDUFAF8
SP2
DNM2
ARHGDIA
P4HB
STAP2
MPND
RAB5B
PMEL
CDK2
KATNB1
ARRDC4
DOLPP1
BAZ2A
ATP5F1B
ARNTL
RFX1
AP3M2
EIF2AK3
ARID4A
ZNF687
SP1
E4F1
PGP
BRICD5
HNRNPC
CNOT1
PRKACA
EVI5L
BABAM1
TMEM94
STIP1
GPR84
CIC
MPV17L2
ZNF77
NLK
TOP2A
SKA2
PRR11
OSBP
GOT1
HNRNPL
PROSER3
LIN37
HSPB6
TRAF2
SLC39A2
METTL17
PSPN
ALKBH7
TDRKH
PRR14
FBRS
GLRX5
CAMTA1
UBE2C
RECQL
GOLT1B
TOM1L2
DRC3
ACTL6A
NCDN
KIAA0319L
SLC25A41
KHSRP
GPR108
TRIP10
ANKHD1-EIF4EBP3
ANKHD1
TOMM40
SLC34A3
TUBB4B
FAM166A
STPG3
HNRNPUL1
PITPNM1
TEDC1
CRIP1
PXMP4
FDFT1
MSMO1
HSPA5
LRCH4
FBXO24
AJM1
MAMDC4
SLX1B
SLX1A
BOLA2B
BOLA2
CORO1A
SULT1A4
SULT1A3
RFWD3
COPZ1
FAAP24
CEP89
MOGS
WBP1
INO80B
LRRC45
CENPX
RAC3
SPAG7
TCERG1
ZSWIM4
G3BP1
SNRPF
BOLA2-SMG1P6
POU5F1
TCF19
CCHCR1
MTMR4
SEPTIN4
FAM72C
FAM72A
KAT6B
KAT7
PAN2
IL23A
HMGCS1
FRYL
KDM4B
DROSHA
C5orf22
H2AZ2
SARNP
ORMDL2
CNOT3
COQ8A
RBM15B
MANF
FAM72D
AK2
KCNAB2
MRPL34
DDA1
ABHD8
OS9
ZFYVE21
XRCC3
KPNB1
CHCHD6
SHC1
FLAD1
CKS1B
NPR1
ILF2
MTFR2
MVD
ABHD2
UBALD2
POLR2G
ZBTB3
JUP
NRL
DCAF11
MTMR12
HDGFL2
SLC25A25
NAIF1
PDK2
RBM27
HSP90B1
TYK2
TMEM60
PHTF2
SLC25A42
STT3A
CNPY3
SYP
PRICKLE3
PRPF40A
ARL6IP6
TMX2
MED19
ISOC2
ZNF691
YIF1A
TMEM151A
WDR97
MAF1
CYC1
SPSB3
NUBP2
MRPS34
EME2
ZNF48
TBC1D10B
MYLPF
WDCP
FKBP1B
CENPA
YJU2
XAB2
STXBP2
PCP2
PITX3
GBF1
GATAD2A
DDX39A
RAB3A
ASF1B
TMEM160
ZDHHC16
EXOSC1
ARMC1
DERL3
ATP5MC1
DNAJC14
ZNF555
CBX5
HNRNPA1
GATAD2B
PWWP2A
CFAP43
PAIP2B
H3-3B
UNK
PRRC2B
ZNF8
MSANTD4
ZNF574
CENPF
CD68
EIF4A1
ABL1
IARS1
TSKS
AP2A1
VCP
FANCG
ZNF775
ARHGAP19
DDX49
COPE
THRA
RPLP0
GCN1
MMACHC
TICRR
TESK2
NUDT2
KIF24
PI4K2A
MORN4
PODNL1
DCAF15
ZNF718
ZNF595
NUMB
SEL1L
EEF1AKNMT
CLDN9
LENG1
CGGBP1
ZNF654
ZBTB5
JPT1
PIP4P1
OSGEP
APEX1
PNP
FAM72B
ATG9B
ABCB8
PRADC1
CCT7
MAEA
ZNF785
ZSWIM1
SPATA25
NEURL2
CTSA
TBCCD1
DNAJB11
ATP5PD
CYTH2
PABPN1
ZBTB32
VAMP2
PER1
MAMDC2
DCUN1D4
SOD2
RAB11B
ACAT2
NGDN
IMMP1L
ELP4
CDC23
ZSWIM3
ACOT8
PPP1R12B
UBE2T
FAM204A
OGFOD1
NUDT21
RAD23A
CALR
FARSA
AGER
RNF5
AGPAT1
GOLPH3L
HBP1
ZNF143
SYNE4
LOC101927572
ALKBH6
NFE2L1
HMX2
BUB3
CCDC116
SDF2L1
GOLGB1
SIRT2
NFKBIB
CANX
PSME1
RNF31
PSME2
EMC9
TMEM70
ELOC
PHB
RAB4B
MIA
SLC25A28
LAS1L
EXOC4
RRBP1
DNAJB5
FAM126A
DDOST
MTR
PDXP
TOM1
SPTLC2
HGS
ARL16
KCTD7
CNFN
GSTO2
CCDC61
KLHDC10
ZSCAN20
TNRC6B
LCMT1
CDCA3
UGP2
ERI3
BIVM-ERCC5
POGLUT2
BIVM
PTBP1
PSMD4
C10orf143
ANAPC5
RNF181
TMEM150A
NFATC2IP
ECT2
PANK2
UBL5
PIN1
CDKN3
MNS1
TMEM217
TBC1D22B
LMCD1
SAMM50
SIN3A
CALR3
C19orf44
NUP107
RBM42
TCP1
MRPL18
PNLDC1
USF3
DPH2
ATP6V0B
B4GALT2
FBXO5
TARS2
SUN3
C7orf57
HACL1
BTD
BPGM
CYLD
ATP5IF1
DCP2
ANKZF1
ZFYVE26
RAD51B
CEP41
SLC25A19
NEMP1
STIL
POTEF
RXFP4
KHDC4
SRP9
ANP32E
SPAG8
HINT2
ZNF556
PPP1R3F
FOXP3
SPC25
THAP1
MTOR
MAP3K3
SSR3
ZNF519
SNRNP25
POLR3K
GSK3B
PNKP
AKT1S1
TBC1D17
NF2
STK40
PSMA5
SPRYD3
CKAP2L
ARL17B
ARL17A
FDXR
INTS4
ENSA
CCDC66
ETV5
TMEM218
H4C14
H3C15
H3C14
H2AC19
H2AC18
PSAT1
OTUB2
PKLR
FDPS
TMPO
LAPTM4A
RWDD1
TPRKB
MYH10
IBTK
ZNF774
MZT1
BORA
FAM83D
RBM14-RBM4
RBM14
HOMEZ
TLE2
UNG
ALKBH2
LTN1
ANKRD39
INCENP
TROAP
NAT16
PGK1
DCTN4
COPS7B
PDE6D
RGMB
AGPAT5
ZNF724
EHBP1
RUVBL1
OPA3
RGS14
LMAN2
MACO1
FAM117A
RHCE
ANP32A
PCNX3
MAP3K11
WDR89
KDM4D
CWC15
LCA5
MXD1
UVRAG
KLF1
GCDH
DNASE2
MVK
VPS35
PCLAF
TRIP4
NEK10
BCAS3
NFYC
TRAPPC6A
BLOC1S3
TMA7
CCDC51
ATRIP
PLXNB1
CKAP5
PPP2R5E
MSTO1
ZNF564
TCTN3
GLCCI1
YWHAQ
PRMT1
BAGE5
BAGE4
BAGE3
BAGE
VIRMA
C16orf95
TTLL5
ERG28
DICER1
KBTBD8
ATP7B
ALG11
CCDC77
STK11
TCIRG1
NDUFS8
CYB5B
PPWD1
CENPK
JPT2
RBM15
TMEM45A
DPAGT1
H2AX
HMBS
STARD3NL
NCBP2AS2
NCBP2
MRTFA
MAMSTR
TRAFD1
ADAMTSL5
SIVA1
DBP
HMGCR
CA11
WAPL
PNKD
GPBAR1
CEP68
AAMP
OSCP1
RND1
FER
CDR2
COPS4
RPS5
RNF225
DUX4
PLEKHA8
FKBP14
PNPO
PPM1B
RLN1
PAF1
MED29
CYB5A
DAZAP2
EIF3F
GLO1
CCDC146
GIPC1
F11R
NDUFB3
FAM126B
TXNDC16
YBX1
TRIM68
MYH14
RRP9
PARP3
YIPF4
SFXN5
RAP2A
TMEM161A
KIF1B
TMEM205
RAB3D
CCDC159
PLPPR2
TTC16
PTRH1
CFAP157
MISP3
SAMD1
C19orf67
WDR25
WARS1
RMI2
MTRNR2L1
LMOD1
FRMD5
TIMM17A
ZMYM2
SLC33A1
TTF2
RLN2
MDM1
TSPAN31
AGAP2
MARCHF9
CDK4
ATPAF2
GID4
THAP9
SEC31A
TBCB
POLR2I
OVOL3
TMEM53
ARMH1
TLE3
FBH1
ANKRD16
POC5
TANGO2
ARVCF
PLPBP
MRPL20
CCNL2
ING1
CARS2
PSMB7
SECISBP2
CKS2
PMEPA1
MCM5
ZNF141
HJURP
ETF1
SPRING1
RNFT2
LZTS2
TWNK
MRPL43
ZNF695
HNRNPR
MAGI3
DDX19B
AARS1
CDK5RAP3
VPS26B
NCAPD3
MCM3
NOL6
SUFU
ACTR1A
C2orf42
ADD1
PMPCB
FAR1
MCCC1
SLC39A5
RNF41
NABP2
PSENEN
IGFLR1
WBP1L
KDM4A
GSTT2B
DDTL
DDT
GSTT2
BRIP1
CEP131
CYBC1
NARF
TULP3
KANSL2
GET3
ZC3H10
RPL41
ESYT1
KMT5C
ARL6IP1
ING4
RAB5C
NME7
BLZF1
RPL13A
ZMYM5
RPS11
SF3B5
RTN4IP1
QRSL1
ZNF436
TPRN
TMEM203
NDOR1
RBX1
RTN4
CDC25A
CWF19L1
GFM1
TOMM22
PCYOX1L
HNRNPAB
PSMB3
PCGF2
HMGB2
KLF6
PMS2
AIMP2
TMCO6
NDUFA2
IK
TTBK2
PICK1
FAM161B
COQ6
TPX2
PHF14
USP1
SZT2
MED8
TXNIP
L3MBTL2
MAP11
LAMTOR4
TSACC
CCT3
ZNF513
SYCE1L
MON1B
POTEE
RNF121
LOC100133315
NSDHL
CETN2
RBM48
PEX1
SELENOI
ADGRF3
SNX32
HSCB
CHEK2
FICD
FOXJ2
PTMA
DHX8
STPG1
NIPAL3
TMBIM6
SLIRP
ALKBH1
ZCCHC17
SNRNP40
CEP164
CALM3
PPP5D1
EHD4
GGCT
ALKBH3
UTP23
CDC45
UFD1
CCNB2
RARS2
ORC3
CAB39L
ZSCAN32
ZNF174
SETDB2-PHF11
SETDB2
SH3GL1
ARAF
CHAF1A
C5orf51
EIF3L
ANKRD54
LIN52
ALDH6A1
ORC2
RAD54L
RPL18A
KANSL1
SARS2
MRPS12
EDEM3
TNNI3
DNAAF3
SLC26A2
UTS2R
TEX19
TMEM38A
SMIM7
WBP11
C12orf60
RNF103-CHMP3
RMND5A
XPO1
PARL
SMARCA2
WDR81
TLCD2
SFPQ
CABIN1
GSTT4
SERP1
EIF2A
USP21
PPOX
CALU
CCDC130
PMF1-BGLAP
PMF1
ZNF789
ATP5MF-PTCD1
ATP5MF
SETD3
CCNK
OSBPL9
FAM185A
TLE6
RUVBL2
GYS1
MFAP3
FAM114A2
CHD6
FAM53C
CDC25C
MTRR
FASTKD3
ELAC2
FHIT
PPP2R5A
IP6K1
EIF5
CAND1
RERE
ZBTB9
WDTC1
CNNM2
ZFAND4
TIMM44
RPA2
HMGB1
RAP2B
TXNL4B
DHX38
MRPS30
FNBP4
SHKBP1
SPC24
HSD17B7
RNF34
ZNF688
RBM4
MAP3K7CL
CCT8
BMT2
BAZ1B
RCL1
ZWINT
PPP6R3
EPN1
WHAMM
FSD2
ABCA7
TMED10
PPM1K
MIIP
NEU1
XRCC4
TMEM167A
DAPK3
EIF2B2
TPD52L2
ABHD16B
RUBCN
RACGAP1
CDCA8
C1orf109
ATF7-NPFF
ATF7
INPP5B
PAK4
STXBP5
VBP1
KIF20A
BRD8
C14orf93
TTC31
CCDC142
RAB6A
SLF2
AURKAIP1
WDR45
NAP1L4
RAB39A
CEP152
KMT5A
HSD17B12
MLH1
EPM2AIP1
GDI1
ATP6AP1
ZNF740
CSAD
PCBP2
ASPM
ENPP5
ALG10B
UBP1
SWSAP1
EPOR
NCOA2
TECPR1
VPS4B
MED15
ID2
PRCD
CYGB
CHP1
EXD1
BUB1
GPD1
COX14
CEP192
MTA2
TUT1
EAPP
NUF2
GTF3C5
RBM39
NUPR2
CHCHD2
DLGAP5
FCF1
AREL1
TPCN1
IQCD
MON1A
SETD5
RBM6
PIK3CA
MCRS1
RPL31
SNRPE
MORN2
DHX57
PHF12
SCAI
PRODH
LOC102724788
UBE2S
NOL7
SLC39A1
CRTC2
RRN3
RPN2
MROH8
MIGA1
CREB3L4
MPHOSPH8
PITX2
JTB
CLIC1
MSH5
GRK6
DDAH2
RGL2
PFDN6
WDR46
KDM5A
ZNF586
RAB8A
C1orf54
TOGARAM1
KLHL28
LMBR1L
CIART
ZNF493
WDR74
STX5
ZBTB26
RABGAP1
ZNF547
TRAPPC2B
OARD1
NFYA
PGAP2
C9orf85