ChIP-Atlas: Target genes

Potential target genes for RARA

Query protein: RARA
Distance from TSS: ± 1 kb  ± 5 kb  ± 10 kb
Sort key: SRX4671314 | SUM 159PT
 
Color legends
  1000 750 500 250 1 0  (Values = Binding scores of MACS2 and STRING)

Download: TSV (text)
Links: Movie and Document for ChIP-Atlas Target Genes
RARA's Target genes

◢ RARA: Average

◢ SRX2748853: Adenoid cystic carcinoma

◢ SRX2748855: Adenoid cystic carcinoma

◢ SRX10442515: BE(2)-C

◢ SRX8814860: BE(2)-C

◢ SRX2635935: Hep G2

◢ SRX2635936: Hep G2

◢ SRX25244558: hESC derived endodermal cells

◢ SRX25244559: hESC derived endodermal cells

◢ SRX25244560: hESC derived endodermal cells

◢ SRX25244561: hESC derived endodermal cells

◢ SRX21236745: IMR-32

◢ SRX21236746: IMR-32

◢ SRX21236747: IMR-32

◢ SRX21236748: IMR-32

◢ SRX3584302: iPSC derived chondrocytes

◢ SRX3584303: iPSC derived chondrocytes

◢ SRX3584304: iPSC derived chondrocytes

◢ SRX3584305: iPSC derived chondrocytes

◢ SRX3584306: iPSC derived chondrocytes

◢ SRX3584307: iPSC derived chondrocytes

◢ SRX3584308: iPSC derived chondrocytes

◢ SRX3584309: iPSC derived chondrocytes

◢ SRX3584310: iPSC derived chondrocytes

◢ SRX3584311: iPSC derived chondrocytes

◢ SRX3584312: iPSC derived chondrocytes

◢ SRX3584313: iPSC derived chondrocytes

◢ SRX6039037: iPSC derived chondrocytes

◢ SRX6039038: iPSC derived chondrocytes

◢ SRX6039039: iPSC derived chondrocytes

◢ SRX6039040: iPSC derived chondrocytes

◢ SRX6039041: iPSC derived chondrocytes

◢ SRX6039042: iPSC derived chondrocytes

◢ SRX3584300: iPS cells

◢ SRX3584301: iPS cells

◢ SRX19662659: Ishikawa

◢ SRX19662660: Ishikawa

◢ SRX4671297: NAMEC8

◢ SRX4671298: NAMEC8

◢ SRX4671299: NAMEC8

◢ SRX014752: NB-4

◢ SRX014770: NB-4

◢ SRX17639399: NB-4

◢ SRX17639400: NB-4

◢ SRX17639401: NB-4

◢ SRX17639402: NB-4

◢ SRX8814876: Neuroblastoma

◢ SRX9607665: NTERA-2

◢ SRX9607666: NTERA-2

◢ SRX1035586: SK-N-SH

◢ SRX1035587: SK-N-SH

◢ SRX1035588: SK-N-SH

◢ SRX1035589: SK-N-SH

◢ SRX4671312: SUM 159PT

◢ SRX4671313: SUM 159PT

◣ SRX4671314: SUM 159PT

◢ SRX19662634: T-47D

◢ SRX19662636: T-47D

◢ SRX682379: TSU-1621MT

◢ SRX014781: UPR9

◢ SRX014782: UPR9

◢ RARA: STRING

MAMDC2
SNAPC1
EAPP
WDR74
STX5
MTRNR2L1
LOC102724770
DGCR6
MTRNR2L2
MSH3
DHFR
POLR3E
SNX16
VSIR
SHF
ART1
BRMS1
B4GAT1
DUX4
PPP6R3
KNL1
ID1
POLG
DPP9
SACM1L
FRG2C
DHRS3
TBL1X
PRMT5
FBXO31
MAP1LC3B
FCGR3A
LUC7L2
FMC1-LUC7L2
FMC1
LTA4H
ZBED9
GSTA4
COL23A1
TRIM7
TAF12
NDUFS7
STRA6
MACC1
C8orf37
PSMA3
PLXDC1
SIT1
CCDC107
ARHGEF39
RAB11A
H4C8
MPZL1
FRG2
SOAT2
IGFBP6
MTRNR2L8
HSPA6
H4C12
H4C11
H2BC15
H2AC15
H2BC17
H2AC17
OR2B2
NPR1
ILF2
PHRF1
MTERF4
ELF1
WBP4
RPS29
NOP53
ZNF184
TRIM41
ABLIM3
PDE4DIP
NCOA7
TIA1
PCYOX1
ATP1A2
TMEM242
RNASE4
ANG
NEMF
BORCS6
HMGN4
FCGR3B
METTL26
WFIKKN1
MCRIP2
TTI2
WSB2
SMARCC2
ANGPTL4
CFAP45
BCAR3
PTPRE
OR1F1
IER3
FLOT1
NME1
SIRT4
STX16
SNAI2
CCDC136
OPN1SW
RAD54L2
STAT6
PXK
CSRNP1
PSMB3
PCGF2
UBC
ARL4D
NUF2
DUSP1
FTH1
SCNN1A
LTBR
GTF2H2
PPEF1
RS1
MTF2
MDM4
UBE2H
MYNN
ACTRT3
ISLR2
YARS1
S100PBP
NFE2L2
CASC3
ALOX5AP
POLDIP3
H4C14
H3C15
H3C14
H2AC19
H2AC18
ZNF285
DRAP1
C11orf68
EIF2D
CYB561D1
ATXN7L2
PHLDB2
MUC3A
SERPINE1
DDIT4
HES1
OR2T1
ZNF839
TMEM167B
CCL20
FRA10AC1
TACO1
HEG1
PRKAG2
H4C15
FAM227B
DTWD1
MED23
BHLHE40
RPL37
CARD6
TPCN1
TRIB3
ZNF827
MRPL40
HIRA
HIF3A
CCNL1
ZNF219
TMEM253
TES
TMEM259
CNN2
TEFM
DPYSL2
CCN5
STUB1
WDR24
JMJD8
SNX18
ARID3B
MED16
METTL15
KIF18A
BCL3
SAR1B
TNPO1
TEDC1
CRIP1
LRRC37A3
CRIP2
SMARCD2
SLC35E2B
ANP32E
PTPRJ
JUNB
USP30
RBFOX2
OR6S1
TMEM262
BDKRB1
RUVBL1
EEFSEC
SGCA
PCLAF
TRIP4
SLC44A1
MRI1
C19orf53
RPL22
RNF207
UPK2
KRT6A
NUP50
CCDC80
PLD4
MRPS35
HSPA5
EIF4A3
NOTCH2NLC
NOTCH2NLB
NOTCH2NLA
SPIDR
ATF3
TRIB1
SOD2
WTAP
MKNK2
CPEB3
C7orf65
BAZ2A
TSFM
MRPS31
BCL2L1
PARP16
DCP1A
FZD2
NPIPB6
PSMF1
SYS1
TRIOBP
ACSL1
IRX2
C5orf38
SLC9A1
ARID1A
R3HCC1
ART4
TNFRSF10B
POLR3B
TOB2
KRT8
MAT2A
SRP14
OPA1
IARS1
WDR36
GPT2
ARID5B
KRT80
RTP3
EPB41
LTF
LRRC59
INO80C
TXNRD1
TOP3B
PYGB
KANSL3
FER1L5
PECAM1
PTPRH
ADGRG1
GADD45A
MRPS15
ANO10
ABHD5
USP17L5
USP17L30
USP17L29
USP17L28
USP17L27
USP17L26
USP17L25
USP17L24
ARMC12
FKBP5
GTF2H2C_2
GTF2H2C
PSAP
FOXN3
TMEM41A
H3C4
H4C4
H2BC6
IQSEC3
SLC35F6
CDKN2AIPNL
H1-2
SNRPE
CAMK2D
ADAMTS9
MRPL21
IGHMBP2
TMEM107
DCAF10
INTS12
GSTCD
EPB41L4B
ZFP36
PLEKHG2
CALM1
SLC17A3
MKRN3
MYBPC3
NDST1
TNIP1
ZNF296
GEMIN7
CD8A
COMMD2
LAG3
JUN
SHISA4
NR1H3
ACP2
HES7
ALOXE3
KLF9
GTF3C3
C2orf66
GABARAPL1
LASP1
NDUFC2-KCTD14
NDUFC2
PLIN3
LPP
OR6J1
TDG
C12orf73
STN1
S100A2
SOST
RGPD8
RGPD5
RGPD6
GNA12
DCLRE1B
AP4B1
ABT1
TMEM250
NUP54
ZNF207
C17orf75
PHACTR4
SNAP47
JMJD4
GTF3C5
NANOS3
HTR5A
NDUFC1
NAA15
GBA
ATF1
DMAP1
C8orf33
AMTN
SPRED2
TEX46
KDM1A
EIF3F
PCBD2
SYT8
TLR4
ARL8B
PRKCE
STX18
BCAR1
TAS1R1
NOL9
PLD1
ZSCAN22
ITGB3BP
EFCAB7
PEX3
ADAT2
ZMYND8
PROSER1
NHLRC3
CALM2
DDX1
CEBPB
BEST1
SH3BP4
ATP5MC2
ANKRD63
SF3A3
TRIM55
PDE4D
EEF2K
GRIK4
CFLAR
STAG1
HMGB1
USPL1
KLF7
SPSB1
EXOC2
RASSF5
ANKRD39
ELF3
TMEM132A
CTNNA3
CELSR3
RHBDL1
RHOT2
TBC1D2
BTG2
TAMM41
IGSF10
NARS1
MKX
INTS1
DUS1L
MAML3
ZNF212
UNC45B
NLE1
MRPL39
DTNA
BCAS4
SMG8
NABP1
BZW2
SUGCT
MPLKIP
HOXA3
HOXA2
AURKAIP1
KIF2C
OR1J4
OR1J2
MIDEAS
COPS7B
DLX2
TIMMDC1
FLYWCH1
PDE6D
DLX1
LDLR
WDR97
MAF1
CYC1
MAP3K8
STK40
TEKT2
ADPRS
FAN1
NSUN4
MRPS14
MFSD11
SRSF2
TARS2
CCAR2
C8orf58
RIN3
LSMEM1
HINT3
LSM12
G6PC3
RBBP5
ARHGDIA
P4HB
ARHGAP24
TMEM248
TRIM8
POMZP3
UQCRH
LRRC41
LRFN3
POFUT2
NEBL
SSBP2
PPARD
NPHP1
MTLN
TBC1D19
PLAT
C18orf63
TLR2
SIAH1
PPARG
ATXN2L
NFKBIA
AHDC1
H2BC14
H2AC14
MAD1L1
KLF15
KRT83
FAM43A
ZC3H12A
FUCA1
CCDC33
LTBP3
SURF6
MNAT1
SCNN1G
RTN4
H4C3
H1-6
THAP9
SEC31A
SETD7
LAMTOR5
ANKRD46
ABCG1
ZNF609
VPS72
PIP5K1A
IL16
NPIPB9
GMEB2
ARID2
ACOT7
ADGRF5
XCR1
NBPF1
AHR
NT5C
ANXA5
USP17L21
USP17L20
USP17L12
USP17L22
CPE
TGIF1
NSFL1C
FUS
WNT9A
C3
ZFP36L1
KDM4A
GFM2
TUBGCP3
SLC25A45
FRMD8
BCAT1
KDM3B
GABRE
TSPAN16
VIRMA
ZNFX1
DUS2
DPEP2NB
DDX28
NOXO1
H3-3B
UNK
SLC24A1
SYNGR3
GFER
CTDSP1
STMP1
RWDD3
PIK3R1
LSG1
ZNF461
SLC2A9
LMO4
PLEKHA6
SRRM3
GBX1
BCOR
MRPL1
MRO
ABCC10
NOL4L
LEKR1
TRIAP1
COX6A1
NCF1
RBM28
C18orf21
RRP15
LIMD1
KPNB1
MRPS23
ZSCAN25
LOC100509620
MAFK
ZNF513
SNX17
EIF2B4
CLK3
SLC7A11
DDX47
FIBCD1
ZBTB45
SLC27A5
TM4SF1
ITPRIP
MOB4
IGFBP1
EIF4G2
MRPL3
FTL
TRDMT1
FAM228B
CCND1
BCL9L
ABHD12
NLRX1
TAF3
SF3B6
GTF2A1
TP53I3
PPP1R1B
AAR2
GOLGA6L4
H3C7
H2BC9
H4C7
SLC7A5
CDK6
HIVEP2
C11orf91
SAMD4A
SLC7A4
LPIN1
WNK4
VPS25
HSP90AB1
CUEDC2
H4C2
PGRMC2
H3C2
H2AC4
H4C1
H3C1
H1-1
PSD
FBXL15
LFNG
MYO1G
AHCY
UBE2V1
YPEL2
GPN3
FAM216A
GOT2
SRRM1
KMT5B
STEAP1
BCL11B
SELENOH
NCF4
ERCC1
EEF1AKMT4-ECE2
EEF1AKMT4
ALG3
PRRT2
AP5S1
FAM53C
CDC25C
TBC1D16
MAZ
ZSCAN12
RHOF
SETD1B
SLC33A1
CRBN
PPL
MTHFD2
DIP2B
PSMD3
EGFLAM
CLUAP1
C16orf90
PAFAH2
PET117
KAT14
ETS2
STK17A
PPA2
THSD1
KDM2A
SAAL1
BRD3OS
OXTR
CRTC1
MRPL44
PSMA1
GYPC
SPRYD4
VPS36
CKAP2
PDE8A
DDX6
PISD
MEF2C
MLLT1
TSPAN14
ROR1
CITED2
HNRNPD
AARS2
TATDN3
NSL1
TTLL4
MTHFD2L
VAPA
GALNT15
RXRA
TAB1
SSRP1
P2RX3
CA2
MECOM
MRPS2
C9orf116
VEGFA
ZNF843
LOC100505841
CSF1
OBSCN
KDM6B
DPAGT1
ANKMY2
H2AX
RAPGEF3
HMBS
AFF1
SRSF7
MTREX
DHX29
TMEM184A
SLC25A21
OR2V2
PDXK
B4GALT3
TRAM2
RPRD1A
EGFR
KRT86
CALCB
TCF7L2
SCRT1
DGAT1
SH2B3
IFIT3
CDKN1A
MTOR
IFIT1B
SLC25A3
ETV1
GPRIN2
TPRA1
ATF6
ARRDC2
SCHIP1
GPR19
ARL6IP1
PPP1R15B
GGA2
AMOTL2
CXCL2
ARHGAP22
FAM72C
FAM72A
RAD50
SLC35E2A
ABLIM1
NUFIP2
OXSM
NGLY1
SMN2
SMN1
LSP1
YBEY
MCM3AP
PSCA
FUT8
PTCD1
CPSF4
ATOX1
FAM98B
HNRNPA1L2
HUS1
NPAS4
ZDHHC4
HBP1
ARHGEF12
CTSB
NDUFAB1
TMEM190
TMEM238
RPL28
TMEM158
CCDC200
SDC4
EPN1
SUCLG2
GOLGA7B
SLC22A15
NKX2-5
C11orf49
UPP1
ZC3H10
RPL41
ESYT1
MTERF1
BTF3
SRGAP1
POMK
SLC45A1
TOB1
PIK3R3
N6AMT1
WDR11
RPL26
KRBA2
FRG1
MDP1
CHMP4A
THOC5
NDUFS4
SMAD3
SKI
PFKP
PIGV
SRP9
IL6ST
MOGS
MCOLN1
ZC3H6
FOXS1
ZNF358
AMACR
PUM2
DSTYK
SLC37A2
MRPL53
WIZ
XPC
LSM3
LIMS4
ARL17B
CABIN1
GSTT4
RPS20
HERC3
BRIX1
PYURF
PIGY
ZMPSTE24
DAND5
NQO2
IL1R1
CARD10
ZFP91
LPXN
NDUFA12
PTPN13
PLEC
TOX2
DDX19A
NEK6
AGK
BBS1
OSMR
BRF2
OLFML3
CYP46A1
KAT2A
HSPB9
DHX58
RAET1G
BMF
MYEOV
NOL7
PACSIN2
CYCS
CXXC4
BSPRY
APOL6
WDR31
RNF216
COX7A2
SERINC2
WDFY2
DACT3
SPATS2L
TACSTD2
STAT1
CTNNB1
CYP2W1
EIF3B
COX19
LATS1
IKBKG
PPP2R5D
PEX6
CNOT2
AJM1
MAMDC4
UBL7
FMNL1
MYL12A
SRA1
TRA2B
AVPI1
SLC35A4
APBB3
EIF4EBP3
MUC5AC
RPA3
FBP2
METTL25
CCDC59
DYNLL1
PARP2
GBE1
CCNB1IP1
MTMR2
NUP188
DOLK
TRIM52
CCDC40
NT5DC4
ROS1
PMAIP1
CAMKK2
HSP90AA1
SEC16A
C9orf163
TM2D1
TERF1
SLFN5
PPP1R18
NRM
ZBTB9
SLC38A2
VRK2
FGF1
RAD23B
EFNA3
TAF4
LRRC2
PEBP4
CAMTA1
STAT3
FOXJ3
TXNIP
ATF4
MALT1
ALG10B
ZNF721
PIGG
EIF4A2
SAMD4B
GMFG
SLC37A4
ACSF3
IRF2BP2
CAPG
SH2D6
FIGNL1
ADAM12
MSANTD3
PDE12
CRYAA2
CRYAA
RER1
MORN1
SMIM3
CIPC
LOC644090
KSR1
MRPS10
SERTAD1
PRX
ABTB2
NIPBL
HEMK1
C3orf18
PRR5L
GJD3
BMPER
PSG4
PSG5
ERRFI1
USP42
PIKFYVE
TCOF1